
Microexon ID | Bn_scaffoldA05:35915479-35915492:- |
Species | Brassica Napus | Coordinates | scaffoldA05:35915479..35915492 |
Microexon Cluster ID | MEP38 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Myosin_head |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTTACTAGAAAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CATTTTAGTGAAAGCGGAAAGATATCGGGTGCTCAAGTTCAGACCTTTTTACTAGAAAAGTCTAGAGTGGTCCAATGTGCTGAAGGGGAAAGGTCATACCATATATTT |
Microexon-tag Amino Acid Seq | HFSESGKISGAQVQTFLLEKSRVVQCAEGERSYHIF |
Microexon-tag spanning region | 35915332-35915638 |
Microexon-tag prediction score | 0.9655 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | BnaA05T0358400ZSx |
Reference Transcript ID | BnaA05T0358400ZS |
Gene ID | BnaA05G0358400ZS |
Gene Name | NA |
Transcript ID | BnaA05T0358400ZS |
Protein ID | |
Gene ID | BnaA05G0358400ZS |
Gene Name | |
Pfam domain motif | Myosin_head |
Motif E-value | 9.10E-244 |
Motif start | 145 |
Motif end | 803 |
Protein seq | >BnaA05T0358400ZS MSQKVSPSMLSLKSLPADYRFDGENSSRPSVGLRNGVSQAGDSEDSPYSGHGVSLEEQSLTDDVEPGAATMPLPQNDERR WSDTSAYARKKILQSWVQLPNGNWELGKILSTSGEESVISLPEGKVMKVISETLVPANPDILDGVDDLMQLSYLNEPSVL YNLNYRYNQDMIYTKAGPVLVAVNPFKEVPLYGNRYIEAYRKKSNESPHVYAIADTAIREMIRDEVNQSIIISGESGAGK TETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSESGKISGAQVQTFLLEKSRVVQC AEGERSYHIFYQLCAGASPALREKLNLTSAHEYKYLGQSNCYSINGVDDAERFHSVKEALDIVHVSKEDQESVFAMLAAV LWLGNVSFTVIDNENHVEPVADESLSTVAKLIGCNIIDLKLSLSKRNMRVGKDTIVQKLTLPQAIDARDALAKSVYSCLF DWLVEQINKSLAVGKRRTGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWTRVDFED NQDCLSLFEKKPLGLLSLLDEESTFPNGTDLTLANKLKQHLHSNSCFRGDREKLFTVVHYAGEVTYDTTGFLEKNRDLLH LDSIQLLSSCSCHLPQAFASSMLIQSEKPVVGPLYKAGGADSQRLSVATKFKGQLFQLMQRLGNTTPHFIRCIKPNNVQS PGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRVSHQKFARRYGFLLVENIADKDPLSVSVAILHQFNILPEMYQVGYTKL FFRTGQIGVLEDTRNRTLHGILRVQSSFRGYQARCHLKELKMGISILQSFVRGDKVRKEFAELRRRHRAAATIQSQVKSK FARKQYKGITDASVLIQSAIRGWLVRRCSGDLRWLKSVGTKTNESGEVLVKASVLSDLQRRVLKSEAALREKEEENDILQ QRLQQYENRWSEYETKMKSMEEIWQKQMRSLQSSLSIAKKSLAVEDSARNSDASVNASDATDWDSSSNQFKSQASNGGGG RQQQQPMSAGLSVIGRLAEEFEQRAQVFGDDAKFLVEVKSGQVEANLNPDRELRRLKQMFETWKKDYGGRLRETKMILSK LGSEESSGSMEKVKRKWWGRRNSTRY* |
CDS seq | >BnaA05T0358400ZS ATGTCCCAAAAGGTGTCTCCATCCATGCTGTCTCTTAAATCTTTGCCAGCAGACTACAGATTCGATGGCGAAAATTCTTC TAGACCGAGTGTTGGCTTGAGGAATGGTGTTAGTCAAGCTGGAGATAGTGAGGATTCACCATATAGTGGTCACGGTGTGT CCCTTGAAGAGCAGTCTTTAACTGATGATGTGGAGCCTGGTGCTGCTACAATGCCCTTGCCTCAGAATGATGAACGCAGG TGGAGTGATACTAGCGCATATGCTCGGAAGAAGATACTGCAATCTTGGGTTCAACTTCCAAATGGTAACTGGGAGCTTGG GAAGATACTGTCAACTTCAGGAGAAGAGTCTGTTATCTCTTTGCCAGAGGGAAAAGTTATGAAAGTTATATCAGAAACTC TAGTACCTGCAAATCCTGATATTCTTGATGGAGTGGATGATCTAATGCAACTAAGTTACTTAAATGAGCCATCAGTGTTG TACAATCTCAACTATAGGTACAACCAAGACATGATATATACAAAAGCTGGACCAGTTTTGGTGGCTGTGAATCCTTTCAA GGAGGTTCCTCTGTATGGAAATCGCTACATTGAAGCATACAGGAAGAAATCAAACGAAAGTCCTCATGTCTATGCCATTG CAGACACAGCAATTCGTGAAATGATACGCGATGAGGTTAACCAATCTATCATTATCAGCGGCGAGAGTGGAGCAGGGAAA ACTGAGACAGCTAAGATAGCTATGCAATACTTGGCTGCTCTCGGAGGTGGAAGCGGGATCGAGTATGAGATACTTAAGAC TAATCCCATTTTGGAAGCATTTGGAAATGCTAAAACTTTGAGAAATGATAACTCTAGTCGTTTTGGGAAGCTGATAGAGA TTCATTTTAGTGAAAGCGGAAAGATATCGGGTGCTCAAGTTCAGACCTTTTTACTAGAAAAGTCTAGAGTGGTCCAATGT GCTGAAGGGGAAAGGTCATACCATATATTTTACCAACTTTGTGCTGGGGCTTCACCTGCGTTAAGAGAGAAGCTAAATCT GACAAGCGCACATGAGTACAAGTATTTGGGACAGAGTAATTGTTATTCAATCAATGGAGTTGATGATGCTGAACGTTTTC ATAGTGTTAAGGAAGCTCTAGACATTGTTCATGTTAGTAAAGAAGATCAAGAAAGTGTGTTCGCAATGCTTGCTGCAGTA TTATGGCTGGGGAATGTTTCCTTCACCGTTATTGACAATGAAAACCATGTTGAGCCTGTAGCAGATGAAAGTTTGTCAAC TGTTGCTAAATTAATTGGGTGCAACATCATTGATCTTAAGCTAAGTTTATCGAAACGTAACATGAGAGTTGGAAAAGATA CCATTGTGCAGAAGCTAACACTACCGCAGGCCATTGATGCAAGAGATGCTTTAGCAAAATCGGTTTATTCATGCCTGTTT GACTGGCTGGTTGAGCAGATCAACAAGTCTCTTGCAGTGGGGAAGAGGCGAACTGGGAGATCCATCAGCATTCTTGATAT CTATGGCTTTGAATCATTTGATAAAAATAGCTTTGAGCAGTTCTGTATAAATTATGCAAATGAGAGATTGCAGCAACACT TTAACCGTCATCTATTCAAGCTGGAGCAAGAGGAATATATCCAAGATGGTATTGACTGGACAAGGGTTGATTTTGAGGAC AACCAAGATTGTCTTAGTCTCTTTGAAAAGAAACCATTGGGGCTGCTTTCTCTTTTGGACGAGGAATCAACATTTCCGAA TGGCACAGATTTGACACTTGCAAACAAGCTAAAACAGCATCTACACTCTAATTCATGTTTCAGAGGAGATCGAGAGAAGC TTTTCACAGTTGTGCATTATGCAGGAGAGGTTACATATGACACAACAGGATTTCTAGAGAAGAACAGAGACCTGTTGCAC TTGGATTCTATTCAGCTTTTGTCCTCTTGCTCGTGCCACCTTCCTCAAGCGTTTGCTTCTAGCATGCTGATCCAATCCGA AAAACCTGTAGTCGGTCCTTTGTACAAAGCAGGTGGTGCTGATTCCCAGCGGTTGAGTGTAGCTACCAAATTTAAGGGTC AACTATTCCAATTGATGCAACGTTTAGGGAACACTACCCCACATTTCATTCGTTGCATCAAGCCAAATAACGTTCAGTCT CCAGGGTTGTATGAGCAAGGACTTGTCTTACAGCAGCTTAGATGTTGTGGGGTCTTAGAAGTGGTTCGAATCTCACGGTC TGGATTTCCTACAAGAGTGTCTCATCAGAAATTTGCCAGAAGGTATGGTTTCCTTCTGGTGGAGAACATTGCTGATAAAG ATCCTCTAAGTGTCTCAGTTGCGATCCTCCATCAGTTTAATATCTTGCCGGAGATGTACCAAGTTGGCTACACGAAGTTG TTTTTCAGAACCGGCCAGATTGGGGTTCTTGAAGATACAAGGAACCGTACTCTCCATGGCATTTTACGTGTCCAAAGCTC TTTTAGAGGATACCAAGCACGTTGTCACCTGAAGGAGCTTAAAATGGGGATATCTATTCTTCAGTCATTTGTTCGTGGAG ATAAAGTAAGAAAAGAGTTTGCCGAGTTACGAAGGAGGCATAGGGCTGCAGCTACTATACAAAGCCAAGTTAAAAGCAAG TTTGCTAGGAAACAGTATAAGGGTATAACCGATGCGTCGGTTTTGATACAGTCAGCAATTCGTGGCTGGTTGGTTAGAAG ATGCTCAGGAGATCTTAGATGGCTAAAATCTGTAGGCACTAAGACAAATGAGTCAGGCGAGGTACTAGTGAAGGCATCTG TACTTTCCGACCTTCAACGTAGAGTACTTAAATCTGAAGCTGCTCTGCGTGAGAAAGAAGAGGAGAACGACATTCTTCAA CAGAGGCTTCAACAGTACGAGAACCGTTGGTCAGAATACGAGACAAAGATGAAATCAATGGAAGAAATCTGGCAGAAGCA AATGCGGTCGTTGCAATCTAGCCTCTCCATAGCAAAGAAAAGCCTAGCGGTTGAGGACTCTGCTAGAAACTCGGATGCAT CGGTCAATGCAAGTGATGCAACGGATTGGGATTCAAGCAGTAATCAGTTCAAGAGTCAGGCAAGCAACGGAGGAGGGGGG AGACAACAACAACAGCCTATGAGTGCTGGTCTTAGTGTGATTGGACGGTTGGCGGAGGAGTTTGAACAGAGAGCTCAAGT GTTTGGTGATGATGCGAAGTTCTTGGTGGAAGTGAAGTCTGGTCAGGTGGAAGCGAACTTGAACCCAGACAGAGAGCTGA GGAGGTTGAAACAGATGTTTGAGACGTGGAAGAAGGATTATGGAGGGAGGTTGAGGGAAACGAAGATGATACTGAGCAAG CTTGGGAGTGAAGAGAGCAGTGGTTCGATGGAGAAGGTGAAGAGGAAGTGGTGGGGAAGGAGGAATAGCACTAGGTATTG A |
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