Microexon ID Bn_scaffoldA03:19178293-19178306:+
Species Brassica   Napus
Coordinates scaffoldA03:19178293..19178306
Microexon Cluster ID MEP38
Size 14
Phase 1
Pfam Domain Motif Myosin_head
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TCTTACTAGAAAAG
Microexon Amino Acid seq FLLEK
Microexon-tag DNA Seq CATTTTAGTGAAACTGGAAAGATATCGGGTGCTCAAGTTCAAACCTTCTTACTAGAAAAGTCTAGAGTGGTCCAATGTGCTGAAGGGGAAAGGTCATATCATATATTT
Microexon-tag Amino Acid Seq HFSETGKISGAQVQTFLLEKSRVVQCAEGERSYHIF
Microexon-tag spanning region19178142-19178458
Microexon-tag prediction score0.9718
Overlapped with the annotated transcript (%) 100
New Transcript ID BnaA03T0360700ZSx
Reference Transcript ID BnaA03T0360700ZS
Gene ID BnaA03G0360700ZS
Gene Name NA
Transcript ID BnaA03T0360700ZS
Protein ID
Gene ID BnaA03G0360700ZS
Gene Name
Pfam domain motif Myosin_head
Motif E-value 5.40E-244
Motif start 145
Motif end 803
Protein seq >BnaA03T0360700ZS
MSQKVTPSMNSLKSLPADYRFDGSSVPRKGGFRNGISTSDTAAGDSEDSPYSGHVEQQSLSEDMDTDAATMPLPQSNERR
WSDTSAYARKKILQSWIQLPNGNWELGKILSTSGEESVISLAEGKVIKVMSETLVPANPDILDGVDDLMQLSYLNEPSVL
YNLNYRYNQDMIYTKAGPVLVAVNPFKEVPLYGNSYIEAYRKRTNDSPHVYAIADTAIREMIRDEVNQSIIISGESGAGK
TETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGAQVQTFLLEKSRVVQC
AEGERSYHIFYQLCAGASSALREKLNLKSAHEYKYLGQSNCYRINGVDDAERFHTVKEALDIVHVSKEDQESVFAMLAAV
LWLGNVSFTVIDNENHVEPIADESLLTVAKLIGCNSNELKLSLSKRNMRVGKDTIVQKLTLPQAIDARDALAKSIYSCLF
DWLVEQINKSLAVGKRRTGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWTRVDFED
NQDCLSLFEKKPLGLLSLLDEESTFPNGTDLTLANKLKQHLISNSCFRGTREKLFTVVHYAGEVTYETTGFLEKNRDLLH
LDSIQLLSSCSCHLPQAFASSMLIQSEKPVVGPLHKAGGADSQRLSVATKFKGQLFQLMQRLGNTTPHFIRCIKPNNVQS
PGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLVENIADKDPLSVSVAILHQFNILPEMYQVGYTKL
FFRTGQIGVLEDTRNRTLHGILRVQSSFRGYKARCHLKELRMGIYTLQSFVRGEKVRKEFAYLRKRHRAAATIQSQVKSK
IARKQYQDVTEASLVIQSAIRGWLVRRCSGDIGWLKSGEVLVKASVLSELQRRVLKSEAALREKEEENDILQQRLQQYEN
RWSEYETKMKSMEEIWQKQMRSLQSSLSIAKKSLAVEDSARNSDASVNASDATDWDSSSNQFKGGGGRQQQQQRPMSAGL
SVIGRLAEEFEQRAQVFGDDAKFLVEVKSGQVEANLNPDRELRRLKQMFETWKKDYGGRLRETKMILSKLGSEESGGSME
KVKRKWWGRRNSTRY*
CDS seq >BnaA03T0360700ZS
ATGTCCCAAAAGGTGACTCCATCCATGAACTCACTTAAGTCTCTGCCGGCAGACTATAGATTTGATGGCTCCAGTGTTCC
AAGAAAAGGTGGTTTCAGAAATGGGATTAGTACAAGTGATACTGCTGCTGGGGATAGTGAGGATTCACCATATAGTGGGC
ACGTTGAACAGCAGTCTTTATCTGAGGATATGGATACTGATGCTGCTACAATGCCCTTGCCTCAGAGTAATGAACGCAGG
TGGAGTGACACTAGTGCATATGCTCGGAAGAAGATACTGCAATCTTGGATTCAACTTCCCAATGGTAACTGGGAGCTTGG
GAAGATACTGTCAACTTCAGGAGAGGAGTCTGTTATTTCTTTGGCTGAGGGAAAAGTTATAAAAGTCATGTCAGAGACTC
TAGTACCTGCAAATCCTGATATTCTTGATGGAGTGGACGATCTAATGCAACTTAGTTACTTAAATGAGCCATCAGTGTTG
TACAACCTCAACTATAGGTACAACCAAGACATGATATATACGAAAGCGGGACCAGTTTTGGTGGCTGTGAATCCTTTCAA
GGAGGTTCCTTTATACGGAAACAGCTACATTGAAGCATACAGGAAGAGAACAAATGATAGTCCTCATGTGTATGCAATTG
CAGATACAGCAATTCGTGAAATGATACGCGATGAAGTTAACCAATCTATCATTATCAGCGGTGAGAGTGGAGCAGGAAAA
ACTGAGACAGCTAAGATAGCTATGCAATACTTGGCTGCACTTGGAGGTGGAAGCGGGATTGAATATGAGATACTTAAGAC
TAATCCTATCTTGGAAGCATTTGGAAATGCAAAAACATTGAGAAATGATAACTCTAGTCGTTTTGGGAAACTGATAGAGA
TTCATTTTAGTGAAACTGGAAAGATATCGGGTGCTCAAGTTCAAACCTTCTTACTAGAAAAGTCTAGAGTGGTCCAATGT
GCTGAAGGGGAAAGGTCATATCATATATTTTACCAACTTTGTGCTGGGGCTTCATCTGCACTTAGAGAGAAGCTAAATCT
GAAAAGCGCACATGAGTATAAATATTTGGGACAGAGTAATTGTTATAGAATCAATGGAGTTGACGATGCTGAACGTTTCC
ATACTGTTAAGGAAGCTCTGGACATTGTTCATGTTAGTAAAGAAGATCAAGAAAGTGTATTCGCGATGCTTGCTGCAGTA
TTATGGCTGGGGAATGTTTCTTTCACTGTTATTGACAATGAAAACCACGTTGAACCCATAGCAGATGAAAGTTTGTTAAC
TGTTGCTAAATTGATTGGGTGCAACAGCAATGAGCTTAAGCTAAGTTTATCCAAACGTAACATGAGAGTTGGAAAGGACA
CCATTGTGCAGAAGCTAACACTACCGCAGGCCATTGATGCAAGAGATGCTTTAGCAAAATCAATTTATTCTTGCCTCTTT
GACTGGCTGGTGGAGCAGATCAACAAATCTCTTGCAGTAGGAAAGAGACGAACTGGCAGATCCATCAGCATTCTTGATAT
CTACGGCTTCGAATCATTTGATAAAAACAGCTTTGAGCAGTTCTGTATAAATTATGCAAATGAGAGATTGCAGCAACACT
TTAATCGTCATCTATTCAAGCTGGAGCAAGAGGAATATATCCAGGATGGAATTGACTGGACAAGGGTTGATTTTGAGGAC
AACCAAGATTGTCTTAGTCTCTTTGAAAAGAAACCATTAGGGCTGCTCTCTCTTTTGGATGAGGAATCAACATTTCCGAA
TGGCACAGATTTGACACTTGCAAACAAGCTAAAACAACATTTGATCTCTAATTCATGTTTCAGAGGAACTCGAGAGAAGC
TTTTCACAGTTGTCCACTATGCAGGAGAGGTTACATATGAGACGACTGGATTTCTAGAAAAGAACAGAGATTTGTTGCAT
TTGGATTCTATACAACTGTTGTCCTCTTGCTCCTGCCACCTTCCTCAAGCATTTGCATCTAGCATGCTGATCCAATCTGA
AAAACCTGTTGTTGGTCCTTTACACAAAGCAGGTGGTGCTGATTCCCAGCGGTTGAGTGTAGCTACTAAGTTTAAGGGTC
AACTATTCCAATTGATGCAACGTTTAGGAAACACTACCCCACATTTCATCCGCTGCATCAAGCCAAATAACGTACAGTCA
CCAGGGTTGTATGAGCAAGGGCTTGTCTTACAGCAGCTAAGATGCTGTGGGGTCCTAGAAGTGGTTCGAATCTCACGGTC
TGGATTTCCCACAAGAATGTCTCATCAGAAATTCGCCAGAAGGTATGGTTTCCTTCTGGTGGAGAACATTGCTGATAAAG
ATCCTCTAAGTGTTTCAGTTGCAATTCTCCATCAGTTTAACATCTTGCCAGAGATGTATCAAGTTGGCTACACGAAGTTG
TTCTTCAGAACCGGACAGATTGGTGTTCTTGAAGATACAAGGAACCGTACTCTCCATGGCATTTTACGTGTGCAAAGCTC
TTTTAGAGGATACAAAGCACGCTGTCACCTGAAGGAGCTTAGAATGGGAATCTATACTCTCCAGTCATTCGTTCGCGGAG
AGAAAGTAAGAAAAGAGTTTGCTTATTTACGAAAAAGGCATAGAGCTGCTGCTACTATACAAAGCCAAGTTAAAAGCAAG
ATTGCTAGGAAACAGTATCAGGACGTAACAGAAGCGTCTCTTGTGATACAATCAGCAATTCGTGGTTGGTTGGTTAGAAG
ATGCTCAGGGGACATTGGATGGCTAAAATCAGGCGAGGTGCTGGTGAAGGCGTCAGTACTCTCCGAGCTTCAACGCAGGG
TACTTAAATCAGAAGCTGCTCTACGTGAGAAAGAAGAAGAGAACGACATTCTTCAACAGAGGCTTCAACAGTACGAGAAC
AGGTGGTCGGAGTACGAGACAAAGATGAAGTCAATGGAGGAGATCTGGCAGAAGCAGATGCGGTCTTTGCAGTCCAGCCT
CTCCATAGCAAAGAAAAGCCTAGCGGTTGAGGACTCGGCGAGAAACTCAGATGCATCGGTTAATGCTAGTGATGCAACGG
ATTGGGATTCAAGCAGTAACCAGTTCAAGGGAGGAGGGGGGAGACAACAACAGCAACAACGACCTATGAGCGCGGGGCTT
AGTGTGATTGGACGGTTAGCTGAGGAGTTTGAACAGAGAGCTCAAGTGTTTGGTGATGATGCGAAGTTTTTGGTGGAAGT
GAAGTCTGGTCAGGTGGAAGCGAACTTGAATCCGGATAGAGAGCTGAGGAGGTTGAAACAGATGTTTGAGACGTGGAAAA
AGGATTATGGAGGGAGGTTGAGGGAAACGAAGATGATACTGAGTAAGCTTGGGAGTGAAGAGAGTGGTGGTTCGATGGAG
AAGGTGAAGAGGAAGTGGTGGGGAAGGAGAAATAGCACTAGGTATTGA
Bn_scaffoldA03:19178293-19178306:+ does not have available information here.