Microexon ID Bn_scaffoldA01:9889889-9889902:-
Species Brassica   Napus
Coordinates scaffoldA01:9889889..9889902
Microexon Cluster ID MEP38
Size 14
Phase 1
Pfam Domain Motif Myosin_head
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTCTGCTAGAAAAG
Microexon Amino Acid seq FLLEK
Microexon-tag DNA Seq CATTTTAGTGCAAAGGGAAAGATATGCGGAGCCAAACTTGAAACTTTTCTGCTAGAAAAGTCAAGAGTGGTTCAGCTGTCCAATGGCGAGAGATCCTACCATATCTTT
Microexon-tag Amino Acid Seq HFSAKGKICGAKLETFLLEKSRVVQLSNGERSYHIF
Microexon-tag spanning region9889761-9890047
Microexon-tag prediction score0.9532
Overlapped with the annotated transcript (%) 100
New Transcript ID BnaA01T0166700ZSx
Reference Transcript ID BnaA01T0166700ZS
Gene ID BnaA01G0166700ZS
Gene Name NA
Transcript ID BnaA01T0166700ZS
Protein ID
Gene ID BnaA01G0166700ZS
Gene Name
Pfam domain motif Myosin_head
Motif E-value 3.30E-235
Motif start 146
Motif end 797
Protein seq >BnaA01T0166700ZS
MTIPPSPTMKATPEETMESLSQHDDACERLKDYKSPSLPSRRTSQMPSNRQSLPTSLRDTICPERETKEKDCRTEPISEP
EWVNNVEFFITKKLGVWCRGRNGEWHLGKIQSASGDAACVVLSTTEVVEVSMKEILPANPDVLEGVDDLIQLSYLNEPSV
LYNLRVRYSQDLIYSKAGPVLIAVNPFKNVQIYGNDIRSAYQKKALVAPHVYAVADAAFDEMMREEKNQSIIISGESGAG
KTETAKYAMQYLEALGGGNFGVDNEILKTNCILEAFGNAKTSRNDNSSRFGKLMEIHFSAKGKICGAKLETFLLEKSRVV
QLSNGERSYHIFYELCAGASPILKERLNLKEASEYNYLNQSNCLTIDRIDDAQKFHKLMEAFNIVQIPQEHQERAFALLA
AVLWLGNVSFEVIDNENHVDVVADEAVTNVAMLMGCDSKELMVVLSTCKLQAGRDCIAKRLTLPQATDMRDSLAKIIYAS
LFNWLVEQINTSLEVGKLRTGRSISILDIYGFESFKNNSFEQFCINYANERLQQHFNRHLFKLEQEEYEGDGIDWTKVEF
KDNQECLDLIEKKPIGLVSLLDEESNFPKATDTTFANKLKHHLKANSCFRGERRGHGFRVSHYAGEVLYDTNGFLEKNRD
PLHVDLIQLLSSCNCQLLNLFSSKMRDKSLKPSLSESMNQSVITKFKSQLFKLMNKLEDTTPHFIRCIKPNSNHLPGVYE
ENHVLQQLRCCGVLEIVRISRSGYHTRMTHQDLAARYGFLLDTKLSQDPLSTSDSIMKQFNLPPEMYQVGYRKIYLRTGQ
IGLLEERREYVLQGVIGLQKHLRGYKSREYFHNMKKSALILQSYIRGENARRNYIAMQTPATVSSEVTKELDAVIHLQSV
VRRWFVRKQLKNSVELKKQSHNEKKKTRRKSRRKVSEVKDLPLEQFQVQPWDLADLQSRVQKVETAIMQKEDENTALKEE
LQRFEERWIKHETRMKSMEETWQKHISSMQMSLEAACNIMTPDKTASHGNDSEDTISPGTPTKELKGGSLDDIKDIYVEV
DQRRVVFDEDVKRHVEIDELEQVSIAIEKQHAEEELSRLKSRFEKWKKDYKARLRGTKARLRLNGHRNWCGKKSF*
CDS seq >BnaA01T0166700ZS
ATGACTATACCGCCGTCTCCTACGATGAAAGCTACACCTGAGGAGACGATGGAATCTCTTAGCCAACATGATGATGCGTG
CGAGAGGTTGAAGGATTATAAGTCTCCGTCCCTTCCCTCTCGACGCACTTCACAAATGCCGTCGAATCGCCAATCGCTTC
CGACGAGCCTCCGTGATACGATTTGTCCGGAGAGAGAGACCAAAGAGAAGGATTGTAGGACAGAGCCGATCTCGGAGCCT
GAATGGGTCAATAACGTCGAGTTTTTCATCACCAAGAAACTTGGTGTTTGGTGTCGAGGTCGTAATGGGGAGTGGCACTT
GGGGAAGATACAATCTGCTTCGGGTGATGCGGCTTGTGTTGTCTTGTCCACCACGGAAGTTGTGGAAGTATCAATGAAAG
AGATTCTCCCTGCAAACCCAGATGTTTTGGAGGGAGTTGATGACCTTATACAGCTTAGTTACTTGAATGAACCATCTGTT
CTTTACAACCTCAGAGTCAGATACTCACAAGACTTGATTTACAGTAAAGCAGGACCAGTTCTGATTGCAGTGAATCCGTT
TAAGAATGTTCAGATTTATGGTAACGACATTCGATCAGCCTATCAAAAGAAGGCTTTGGTTGCTCCTCATGTTTATGCAG
TGGCTGATGCAGCTTTTGATGAGATGATGAGAGAGGAGAAGAACCAATCTATTATCATAAGTGGAGAAAGTGGAGCTGGG
AAAACTGAGACAGCAAAATATGCAATGCAGTACTTGGAAGCTCTTGGTGGAGGTAACTTTGGGGTGGATAATGAAATCCT
AAAGACTAACTGTATACTTGAAGCTTTTGGGAATGCTAAAACATCAAGAAATGATAACTCTAGCCGATTTGGGAAACTGA
TGGAGATTCATTTTAGTGCAAAGGGAAAGATATGCGGAGCCAAACTTGAAACTTTTCTGCTAGAAAAGTCAAGAGTGGTT
CAGCTGTCCAATGGCGAGAGATCCTACCATATCTTTTATGAATTGTGTGCAGGTGCTTCACCAATTCTTAAAGAGAGATT
GAACCTTAAAGAAGCAAGTGAATACAACTATTTGAACCAGAGCAACTGCTTAACCATTGATCGCATCGATGATGCTCAGA
AATTTCACAAATTGATGGAAGCTTTCAACATTGTTCAGATTCCTCAAGAACATCAAGAACGTGCATTTGCACTGCTTGCA
GCTGTCTTATGGTTAGGGAATGTATCTTTTGAAGTGATTGACAATGAAAACCATGTGGACGTGGTAGCAGATGAAGCTGT
CACTAACGTAGCTATGTTAATGGGATGCGACTCAAAAGAGCTTATGGTGGTTTTGTCTACATGCAAGCTCCAAGCTGGTA
GAGATTGCATAGCTAAAAGACTGACACTGCCACAGGCGACTGATATGAGGGATTCACTAGCGAAAATCATATATGCAAGC
CTTTTCAACTGGCTTGTTGAGCAAATAAACACTTCACTTGAAGTTGGTAAATTAAGGACAGGAAGATCTATTAGTATCCT
TGACATATATGGTTTTGAATCATTCAAGAATAATAGCTTTGAACAATTTTGCATAAACTATGCAAATGAAAGACTGCAAC
AACATTTCAACCGACATCTATTTAAACTTGAACAAGAGGAATATGAAGGGGATGGAATTGATTGGACTAAGGTCGAATTC
AAAGACAATCAAGAGTGTCTAGATCTTATTGAGAAGAAACCCATTGGTTTGGTATCACTACTAGATGAGGAATCAAATTT
TCCAAAGGCAACTGATACAACGTTTGCCAACAAGCTGAAGCATCATTTGAAAGCTAACTCTTGTTTCAGGGGAGAAAGAA
GAGGTCATGGCTTCAGAGTTAGTCATTATGCCGGAGAGGTTCTCTATGATACAAATGGCTTCCTGGAAAAGAACAGAGAT
CCACTGCATGTTGATCTTATCCAACTTTTGTCATCATGCAACTGTCAATTACTGAACCTGTTTTCTTCTAAGATGCGTGA
CAAGTCTCTTAAGCCATCCTTGTCGGAATCCATGAATCAAAGTGTTATTACAAAGTTTAAGAGCCAACTATTCAAGCTGA
TGAACAAGTTAGAAGACACCACTCCTCACTTTATTCGATGCATAAAGCCAAACTCAAATCATCTTCCTGGAGTTTACGAA
GAGAATCATGTTCTACAACAGCTTAGATGTTGTGGCGTTTTGGAGATTGTTAGAATATCAAGATCAGGTTATCATACTAG
GATGACACATCAGGATCTTGCAGCAAGATATGGATTCTTACTGGACACAAAACTCTCCCAGGATCCACTTAGCACATCAG
ATTCTATTATGAAACAGTTCAATCTTCCTCCTGAAATGTATCAAGTTGGATATAGAAAAATATACCTTCGAACCGGGCAA
ATTGGCCTACTTGAGGAAAGAAGAGAATATGTTCTGCAGGGTGTAATTGGATTACAGAAGCATCTTCGTGGTTACAAGTC
TCGTGAATACTTCCACAATATGAAGAAATCAGCATTGATACTTCAATCTTATATCCGCGGTGAAAATGCCAGGAGAAACT
ATATTGCGATGCAAACACCGGCCACAGTTTCCTCAGAAGTAACTAAAGAGCTTGATGCAGTCATACATTTGCAATCTGTG
GTACGGAGATGGTTCGTTCGTAAGCAGTTAAAAAACAGTGTGGAACTGAAGAAACAATCACACAATGAGAAGAAAAAAAC
GAGAAGAAAGTCAAGGAGGAAGGTTTCAGAAGTCAAGGATCTTCCTTTAGAGCAGTTTCAAGTCCAACCTTGGGATCTAG
CTGATCTCCAGAGCCGGGTTCAGAAAGTCGAAACAGCTATAATGCAGAAGGAAGATGAAAACACTGCATTGAAGGAGGAG
TTGCAACGGTTTGAGGAAAGATGGATAAAGCACGAAACAAGAATGAAGTCAATGGAGGAAACATGGCAAAAACATATCTC
TTCAATGCAGATGAGTCTGGAAGCTGCATGTAATATTATGACTCCAGACAAGACTGCAAGTCACGGTAATGACTCAGAGG
ACACAATCTCCCCTGGAACTCCTACAAAAGAGCTCAAGGGTGGTAGCTTGGATGATATTAAGGATATTTATGTAGAAGTT
GATCAACGTAGAGTTGTATTTGATGAAGATGTGAAGCGTCATGTGGAAATAGACGAACTGGAACAAGTGTCGATTGCAAT
CGAGAAGCAGCATGCAGAAGAAGAACTCAGTAGACTGAAGTCAAGATTTGAGAAGTGGAAGAAAGATTACAAAGCGAGAC
TACGAGGGACAAAGGCAAGGCTCCGGTTAAATGGACACAGGAACTGGTGCGGCAAGAAAAGCTTTTGA
Bn_scaffoldA01:9889889-9889902:- does not have available information here.