
Microexon ID | At_4:13698954-13698967:- |
Species | Arabidopsis thaliana | Coordinates | 4:13698954..13698967 |
Microexon Cluster ID | MEP38 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Myosin_head |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTCTCCTAGAAAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CATTTTAGTGCAAAGGGAAAGATATGCGGAGCTAAACTTGAAACTTTTCTCCTAGAAAAGTCAAGAGTGGCTCAGCTGTGCAATGGCGAGAGATGCTACCATATCTTT |
Microexon-tag Amino Acid Seq | HFSAKGKICGAKLETFLLEKSRVAQLCNGERCYHIF |
Microexon-tag spanning region | 13698825-13699126 |
Microexon-tag prediction score | 0.9302 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT4G27370.2x |
Reference Transcript ID | AT4G27370.2 |
Gene ID | AT4G27370 |
Gene Name | VIIIB |
Transcript ID | AT4G27370.2 |
Protein ID | AT4G27370.2 |
Gene ID | AT4G27370 |
Gene Name | VIIIB |
Pfam domain motif | Myosin_head |
Motif E-value | 4.5e-233 |
Motif start | 168 |
Motif end | 820 |
Protein seq | >AT4G27370.2 MMKSSVKEILESLRLLDSSERSSSLPSPSTFRAPMPLIRQSLPAKFRNAISLESKTIEKEDKDWSTEQITQSAEKEKTGN EVVKISTAQMSRAKNSHDPEWINSAEYFVREKLCVWCRVAANGQWHLGKIHSTSSSDDVCVMLSANDDVVKVAMEEIFPA NPEILEGVEDLTQLSYLNEPSLLYNLRVRYSQDLIYSKAGPVLIAVNPFKNVQIYGEEFLSAYQKNALDAPHVYAVADAA YDDMMREEKNQSIIISGESGAGKTETAKYAMQYLEALGGGSFGVENEILKTNCILEAFGNAKTSRNDNSSRFGKLMEIHF SAKGKICGAKLETFLLEKSRVAQLCNGERCYHIFYQLCAGASPILKERLKIKAASEYNYLNQSNCLTIDRTDDAQKFHKL MEAFNIVQIPQEYQERTFALLAAVLWLGNVSFEVIDNENHVEVVADEAVTNVAMLMGCNSKKLMVVLSTCKLQAGRDCIA KRLTLRQATDMRDSLAKIIYASLFNWLVEQINISLEVGNSRTGRSISILDIYGFESFKDNSFEQFCINYANERLQQHFNR HLFKLEQEEYEGDGIDWTKVEFIDNQECLNLIEKKPIGLVSLLNEESNFPKATDTTFANKLKQHLNANSCFKGERGRGFR IKHYAGEVLYNTNGFLEKNRDPLHVDLIQLLSLCKCQLLNLFSTKMHHDFLKPATFSDSMNQSVIAKFKGQLFKLMNKLE DTTPHFIRCIKPNSNQLPGLYEENHVLQQLRCCGVLEIVRISRSGYPTRLTHQELAVRYGCLLLDTRISQDPLSTSKAIL KQCNLPPEMYQVGYTKIYLRTGVISVLEERKKYVLRGILGLQKQFRGYQTREYFHNMRNAAVILQSYIRGENARRNYIVV GESAIVSTAITKELDAAIHLQYMVRKWLARKLLNSTQQKNKPRNEKKKTRRKSTKRVSEDKELLSEQFEVQPCVLADLQS RVLKVEAAIMQKEDENTALQEELQRFEERWLENETRMKSMEDTWQKHMSSMQMSLAAACKVLAPDKTASHGTDSEDTMSF GTPTKELKGSLSDVNNLSTEFDQRSVIIHEDPKSLVEVKSDSISNRKQHAEELRRLKSRFEKWKKDYKTRLRETKARVRL NGDEGRHRNWWCKKSY* |
CDS seq | >AT4G27370.2 ATGATGAAAAGTTCAGTGAAGGAAATTTTGGAGTCTCTTCGCCTGCTTGATTCAAGCGAGAGGTCTTCGTCGCTTCCCTC TCCGTCTACTTTCAGGGCTCCAATGCCGTTGATTCGTCAATCTCTTCCGGCGAAGTTTCGTAATGCAATTTCGCTGGAAA GCAAAACCATAGAGAAAGAAGACAAGGATTGGAGCACTGAGCAGATCACACAATCTGCAGAGAAGGAGAAAACTGGAAAT GAAGTTGTGAAGATTAGTACTGCTCAGATGAGTCGAGCGAAGAACTCGCATGATCCTGAATGGATCAATAGCGCTGAGTA TTTCGTCAGGGAGAAACTTTGTGTTTGGTGTCGAGTTGCTGCTAATGGGCAGTGGCACTTGGGGAAGATACATTCTACTT CTTCTAGTGATGATGTGTGTGTTATGCTGTCCGCTAACGACGATGTTGTGAAAGTAGCAATGGAGGAGATTTTCCCTGCT AACCCAGAGATTTTAGAAGGAGTTGAAGACCTTACTCAGCTTAGTTATTTGAATGAGCCATCTCTTCTCTACAACCTCCG GGTCAGATACTCACAAGACTTGATTTATAGTAAAGCAGGGCCAGTTTTGATCGCAGTAAATCCTTTTAAGAATGTCCAGA TCTATGGAGAAGAGTTTCTATCAGCTTATCAGAAGAATGCTTTGGATGCTCCTCATGTTTATGCAGTGGCAGATGCAGCT TATGATGATATGATGAGAGAGGAGAAGAACCAATCTATTATCATAAGTGGAGAAAGTGGAGCTGGGAAAACTGAGACAGC AAAATATGCAATGCAGTACTTGGAAGCTCTTGGTGGAGGTAGCTTTGGGGTGGAAAATGAAATCCTAAAGACAAATTGTA TACTTGAAGCTTTTGGGAATGCTAAAACATCAAGAAATGATAACTCTAGCCGATTCGGTAAACTGATGGAGATTCATTTT AGTGCAAAGGGAAAGATATGCGGAGCTAAACTTGAAACTTTTCTCCTAGAAAAGTCAAGAGTGGCTCAGCTGTGCAATGG CGAGAGATGCTACCATATCTTTTATCAATTGTGTGCAGGAGCTTCACCAATTCTTAAAGAGAGATTGAAGATTAAAGCAG CAAGTGAATACAATTATTTGAACCAGAGCAATTGCTTAACCATTGATCGCACTGATGATGCTCAGAAATTTCACAAACTG ATGGAAGCTTTCAACATTGTTCAAATTCCTCAAGAATACCAAGAACGTACATTTGCACTGCTTGCAGCTGTGTTATGGCT AGGAAATGTATCTTTTGAAGTGATTGACAATGAAAACCATGTCGAAGTGGTAGCAGATGAAGCTGTCACTAATGTAGCTA TGTTAATGGGCTGCAACTCAAAAAAGCTTATGGTGGTTTTGTCTACATGCAAGCTCCAAGCTGGTAGAGATTGCATTGCT AAAAGACTGACATTGCGACAGGCAACTGATATGAGGGATTCTCTGGCGAAAATCATCTATGCGAGCTTATTCAACTGGCT TGTTGAGCAAATAAACATTTCACTGGAAGTTGGTAACTCACGTACAGGAAGATCTATTAGTATCCTTGATATATATGGGT TTGAGTCATTTAAGGATAATAGTTTCGAACAATTTTGCATAAACTATGCAAATGAAAGACTGCAGCAACATTTCAACCGA CATCTATTTAAACTTGAACAAGAGGAATATGAAGGGGATGGAATTGATTGGACTAAGGTCGAATTCATAGACAATCAAGA GTGTCTAAATCTGATTGAGAAGAAACCCATTGGTTTGGTATCGCTATTAAATGAGGAATCAAATTTTCCAAAGGCAACTG ATACGACGTTTGCCAACAAGCTCAAGCAGCATTTGAATGCTAACTCTTGTTTCAAGGGAGAGAGAGGTCGGGGTTTCAGA ATTAAGCATTATGCCGGAGAGGTTCTCTATAATACAAATGGCTTCCTGGAAAAGAACAGAGATCCGCTGCATGTTGATCT TATCCAACTTTTATCATTGTGCAAATGTCAATTATTGAACCTGTTTTCTACTAAGATGCATCACGATTTTCTAAAGCCGG CAACCTTTTCGGACTCCATGAATCAAAGTGTGATTGCCAAGTTTAAGGGCCAACTTTTCAAGTTGATGAACAAGTTAGAA GACACTACTCCTCATTTTATTCGATGCATAAAACCAAATTCAAATCAGCTTCCTGGACTTTACGAAGAAAATCATGTTCT ACAACAGCTTAGATGTTGTGGCGTTTTGGAGATTGTTAGAATATCAAGATCAGGATATCCTACGCGGTTGACACACCAGG AGCTTGCAGTAAGATATGGATGCCTACTGCTGGACACAAGAATCTCCCAGGATCCACTTAGCACATCAAAAGCTATTTTG AAACAATGCAATCTTCCTCCTGAAATGTATCAAGTTGGTTATACGAAAATATACCTCCGAACTGGAGTAATTAGCGTCCT TGAGGAAAGAAAAAAGTATGTTTTGCGTGGCATACTTGGATTACAGAAGCAATTTCGTGGTTATCAGACTCGTGAATACT TTCACAATATGAGGAATGCTGCAGTGATACTTCAGTCATATATCCGTGGAGAAAATGCCAGGAGAAACTACATTGTGGTA GGAGAATCAGCTATTGTTTCCACAGCAATAACTAAAGAGCTTGATGCAGCTATACACTTGCAATATATGGTACGCAAATG GCTGGCTCGTAAACTCTTAAATAGTACGCAACAGAAGAACAAACCTCGCAATGAGAAGAAAAAAACGAGAAGAAAGTCAA CAAAGAGGGTTTCCGAAGACAAGGAACTTCTTTCAGAGCAGTTTGAGGTCCAACCTTGTGTTCTTGCTGATCTCCAGAGC CGGGTTCTGAAAGTCGAAGCAGCTATAATGCAGAAGGAAGATGAAAACACTGCATTGCAGGAGGAGTTGCAACGATTTGA GGAAAGATGGTTAGAGAACGAAACAAGAATGAAGTCAATGGAGGACACATGGCAAAAGCATATGTCGTCAATGCAGATGA GTCTCGCAGCTGCCTGTAAGGTTTTGGCTCCAGACAAGACTGCAAGTCACGGTACTGACTCAGAAGACACAATGTCCTTT GGAACCCCCACGAAAGAGCTTAAGGGCAGCTTGAGTGACGTTAATAATCTTTCTACAGAATTTGATCAACGAAGCGTCAT AATTCACGAAGATCCGAAAAGTCTTGTCGAGGTGAAATCAGACTCGATCTCAAACAGGAAGCAGCACGCAGAAGAACTCA GGAGACTAAAGTCAAGATTTGAGAAATGGAAGAAAGATTACAAAACAAGACTAAGAGAGACAAAGGCAAGAGTCCGGTTA AATGGTGATGAAGGTCGTCATCGGAATTGGTGGTGCAAGAAAAGTTATTGA |
Microexon DNA seq | TTCTCCTAGAAAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CATTTTAGTGCAAAGGGAAAGATATGCGGAGCTAAACTTGAAACTTTTCTCCTAGAAAAGTCAAGAGTGGCTCAGCTGTGCAATGGCGAGAGATGCTACCATATCTTT |
Microexon-tag Amino Acid seq | HFSAKGKICGAKLETFLLEKSRVAQLCNGERCYHIF |
Transcript ID | AT4G27370.2 |
Gene ID | At.20200 |
Gene Name | VIIIB |
Pfam domain motif | Myosin_head |
Motif E-value | 4.5e-233 |
Motif start | 168 |
Motif end | 820 |
Protein seq | >AT4G27370.2 MMKSSVKEILESLRLLDSSERSSSLPSPSTFRAPMPLIRQSLPAKFRNAISLESKTIEKEDKDWSTEQITQSAEKEKTGN EVVKISTAQMSRAKNSHDPEWINSAEYFVREKLCVWCRVAANGQWHLGKIHSTSSSDDVCVMLSANDDVVKVAMEEIFPA NPEILEGVEDLTQLSYLNEPSLLYNLRVRYSQDLIYSKAGPVLIAVNPFKNVQIYGEEFLSAYQKNALDAPHVYAVADAA YDDMMREEKNQSIIISGESGAGKTETAKYAMQYLEALGGGSFGVENEILKTNCILEAFGNAKTSRNDNSSRFGKLMEIHF SAKGKICGAKLETFLLEKSRVAQLCNGERCYHIFYQLCAGASPILKERLKIKAASEYNYLNQSNCLTIDRTDDAQKFHKL MEAFNIVQIPQEYQERTFALLAAVLWLGNVSFEVIDNENHVEVVADEAVTNVAMLMGCNSKKLMVVLSTCKLQAGRDCIA KRLTLRQATDMRDSLAKIIYASLFNWLVEQINISLEVGNSRTGRSISILDIYGFESFKDNSFEQFCINYANERLQQHFNR HLFKLEQEEYEGDGIDWTKVEFIDNQECLNLIEKKPIGLVSLLNEESNFPKATDTTFANKLKQHLNANSCFKGERGRGFR IKHYAGEVLYNTNGFLEKNRDPLHVDLIQLLSLCKCQLLNLFSTKMHHDFLKPATFSDSMNQSVIAKFKGQLFKLMNKLE DTTPHFIRCIKPNSNQLPGLYEENHVLQQLRCCGVLEIVRISRSGYPTRLTHQELAVRYGCLLLDTRISQDPLSTSKAIL KQCNLPPEMYQVGYTKIYLRTGVISVLEERKKYVLRGILGLQKQFRGYQTREYFHNMRNAAVILQSYIRGENARRNYIVV GESAIVSTAITKELDAAIHLQYMVRKWLARKLLNSTQQKNKPRNEKKKTRRKSTKRVSEDKELLSEQFEVQPCVLADLQS RVLKVEAAIMQKEDENTALQEELQRFEERWLENETRMKSMEDTWQKHMSSMQMSLAAACKVLAPDKTASHGTDSEDTMSF GTPTKELKGSLSDVNNLSTEFDQRSVIIHEDPKSLVEVKSDSISNRKQHAEELRRLKSRFEKWKKDYKTRLRETKARVRL NGDEGRHRNWWCKKSY* |
CDS seq | >AT4G27370.2 ATGATGAAAAGTTCAGTGAAGGAAATTTTGGAGTCTCTTCGCCTGCTTGATTCAAGCGAGAGGTCTTCGTCGCTTCCCTC TCCGTCTACTTTCAGGGCTCCAATGCCGTTGATTCGTCAATCTCTTCCGGCGAAGTTTCGTAATGCAATTTCGCTGGAAA GCAAAACCATAGAGAAAGAAGACAAGGATTGGAGCACTGAGCAGATCACACAATCTGCAGAGAAGGAGAAAACTGGAAAT GAAGTTGTGAAGATTAGTACTGCTCAGATGAGTCGAGCGAAGAACTCGCATGATCCTGAATGGATCAATAGCGCTGAGTA TTTCGTCAGGGAGAAACTTTGTGTTTGGTGTCGAGTTGCTGCTAATGGGCAGTGGCACTTGGGGAAGATACATTCTACTT CTTCTAGTGATGATGTGTGTGTTATGCTGTCCGCTAACGACGATGTTGTGAAAGTAGCAATGGAGGAGATTTTCCCTGCT AACCCAGAGATTTTAGAAGGAGTTGAAGACCTTACTCAGCTTAGTTATTTGAATGAGCCATCTCTTCTCTACAACCTCCG GGTCAGATACTCACAAGACTTGATTTATAGTAAAGCAGGGCCAGTTTTGATCGCAGTAAATCCTTTTAAGAATGTCCAGA TCTATGGAGAAGAGTTTCTATCAGCTTATCAGAAGAATGCTTTGGATGCTCCTCATGTTTATGCAGTGGCAGATGCAGCT TATGATGATATGATGAGAGAGGAGAAGAACCAATCTATTATCATAAGTGGAGAAAGTGGAGCTGGGAAAACTGAGACAGC AAAATATGCAATGCAGTACTTGGAAGCTCTTGGTGGAGGTAGCTTTGGGGTGGAAAATGAAATCCTAAAGACAAATTGTA TACTTGAAGCTTTTGGGAATGCTAAAACATCAAGAAATGATAACTCTAGCCGATTCGGTAAACTGATGGAGATTCATTTT AGTGCAAAGGGAAAGATATGCGGAGCTAAACTTGAAACTTTTCTCCTAGAAAAGTCAAGAGTGGCTCAGCTGTGCAATGG CGAGAGATGCTACCATATCTTTTATCAATTGTGTGCAGGAGCTTCACCAATTCTTAAAGAGAGATTGAAGATTAAAGCAG CAAGTGAATACAATTATTTGAACCAGAGCAATTGCTTAACCATTGATCGCACTGATGATGCTCAGAAATTTCACAAACTG ATGGAAGCTTTCAACATTGTTCAAATTCCTCAAGAATACCAAGAACGTACATTTGCACTGCTTGCAGCTGTGTTATGGCT AGGAAATGTATCTTTTGAAGTGATTGACAATGAAAACCATGTCGAAGTGGTAGCAGATGAAGCTGTCACTAATGTAGCTA TGTTAATGGGCTGCAACTCAAAAAAGCTTATGGTGGTTTTGTCTACATGCAAGCTCCAAGCTGGTAGAGATTGCATTGCT AAAAGACTGACATTGCGACAGGCAACTGATATGAGGGATTCTCTGGCGAAAATCATCTATGCGAGCTTATTCAACTGGCT TGTTGAGCAAATAAACATTTCACTGGAAGTTGGTAACTCACGTACAGGAAGATCTATTAGTATCCTTGATATATATGGGT TTGAGTCATTTAAGGATAATAGTTTCGAACAATTTTGCATAAACTATGCAAATGAAAGACTGCAGCAACATTTCAACCGA CATCTATTTAAACTTGAACAAGAGGAATATGAAGGGGATGGAATTGATTGGACTAAGGTCGAATTCATAGACAATCAAGA GTGTCTAAATCTGATTGAGAAGAAACCCATTGGTTTGGTATCGCTATTAAATGAGGAATCAAATTTTCCAAAGGCAACTG ATACGACGTTTGCCAACAAGCTCAAGCAGCATTTGAATGCTAACTCTTGTTTCAAGGGAGAGAGAGGTCGGGGTTTCAGA ATTAAGCATTATGCCGGAGAGGTTCTCTATAATACAAATGGCTTCCTGGAAAAGAACAGAGATCCGCTGCATGTTGATCT TATCCAACTTTTATCATTGTGCAAATGTCAATTATTGAACCTGTTTTCTACTAAGATGCATCACGATTTTCTAAAGCCGG CAACCTTTTCGGACTCCATGAATCAAAGTGTGATTGCCAAGTTTAAGGGCCAACTTTTCAAGTTGATGAACAAGTTAGAA GACACTACTCCTCATTTTATTCGATGCATAAAACCAAATTCAAATCAGCTTCCTGGACTTTACGAAGAAAATCATGTTCT ACAACAGCTTAGATGTTGTGGCGTTTTGGAGATTGTTAGAATATCAAGATCAGGATATCCTACGCGGTTGACACACCAGG AGCTTGCAGTAAGATATGGATGCCTACTGCTGGACACAAGAATCTCCCAGGATCCACTTAGCACATCAAAAGCTATTTTG AAACAATGCAATCTTCCTCCTGAAATGTATCAAGTTGGTTATACGAAAATATACCTCCGAACTGGAGTAATTAGCGTCCT TGAGGAAAGAAAAAAGTATGTTTTGCGTGGCATACTTGGATTACAGAAGCAATTTCGTGGTTATCAGACTCGTGAATACT TTCACAATATGAGGAATGCTGCAGTGATACTTCAGTCATATATCCGTGGAGAAAATGCCAGGAGAAACTACATTGTGGTA GGAGAATCAGCTATTGTTTCCACAGCAATAACTAAAGAGCTTGATGCAGCTATACACTTGCAATATATGGTACGCAAATG GCTGGCTCGTAAACTCTTAAATAGTACGCAACAGAAGAACAAACCTCGCAATGAGAAGAAAAAAACGAGAAGAAAGTCAA CAAAGAGGGTTTCCGAAGACAAGGAACTTCTTTCAGAGCAGTTTGAGGTCCAACCTTGTGTTCTTGCTGATCTCCAGAGC CGGGTTCTGAAAGTCGAAGCAGCTATAATGCAGAAGGAAGATGAAAACACTGCATTGCAGGAGGAGTTGCAACGATTTGA GGAAAGATGGTTAGAGAACGAAACAAGAATGAAGTCAATGGAGGACACATGGCAAAAGCATATGTCGTCAATGCAGATGA GTCTCGCAGCTGCCTGTAAGGTTTTGGCTCCAGACAAGACTGCAAGTCACGGTACTGACTCAGAAGACACAATGTCCTTT GGAACCCCCACGAAAGAGCTTAAGGGCAGCTTGAGTGACGTTAATAATCTTTCTACAGAATTTGATCAACGAAGCGTCAT AATTCACGAAGATCCGAAAAGTCTTGTCGAGGTGAAATCAGACTCGATCTCAAACAGGAAGCAGCACGCAGAAGAACTCA GGAGACTAAAGTCAAGATTTGAGAAATGGAAGAAAGATTACAAAACAAGACTAAGAGAGACAAAGGCAAGAGTCCGGTTA AATGGTGATGAAGGTCGTCATCGGAATTGGTGGTGCAAGAAAAGTTATTGA |