
Microexon ID | At_3:6951697-6951710:+ |
Species | Arabidopsis thaliana | Coordinates | 3:6951697..6951710 |
Microexon Cluster ID | MEP38 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Myosin_head |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTTACTAGAAAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CATTTTAGTGAAAGTGGAAAGATATCGGGTGCTCAAATTCAAACCTTTTTACTAGAAAAGTCTAGAGTGGTCCAATGTGCTGAAGGGGAAAGGTCATATCATATTTTT |
Microexon-tag Amino Acid Seq | HFSESGKISGAQIQTFLLEKSRVVQCAEGERSYHIF |
Microexon-tag spanning region | 6951548-6951859 |
Microexon-tag prediction score | 0.9718 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT3G19960.1x |
Reference Transcript ID | AT3G19960.1 |
Gene ID | AT3G19960 |
Gene Name | ATM1 |
Transcript ID | AT3G19960.1 |
Protein ID | AT3G19960.1 |
Gene ID | AT3G19960 |
Gene Name | ATM1 |
Pfam domain motif | Myosin_head |
Motif E-value | 2.4e-244 |
Motif start | 167 |
Motif end | 825 |
Protein seq | >AT3G19960.1 MSQKVTPFMQSLKSLPADYRFDGSPVSDRLENSSGASVRLTNSNVPRKGGLRNGVSRTDTAAGDSEDSPYSGHGVFVEEQ SLTDDVDSGAATMPLPQSDERRWSDTSAYARKKILQSWIQLPNGNWELGKILSTSGEESVISLPEGKVIKVISETLVPAN PDILDGVDDLMQLSYLNEPSVLYNLNYRYNQDMIYTKAGPVLVAVNPFKEVPLYGNRYIEAYRKKSNESPHVYAIADTAI REMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSE SGKISGAQIQTFLLEKSRVVQCAEGERSYHIFYQLCAGASPALREKLNLTSAHEYKYLGQSNCYSINGVDDAERFHTVKE ALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADESLSTVAKLIGCNINELTLTLSKRNMRVRNDTIVQK LTLPQAIDARDALAKSIYSCLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHL FKLEQEEYIQDGIDWTRVDFEDNQNCLSLFEKKPLGLLSLLDEESTFPNGTDLTLANKLKQHLQSNSCFRGDKGKLFTVV HYAGEVTYETTGFLEKNRDLLHSDSIQLLSSCSCLLPQAFASSMLIQSEKPVVGPLYKAGGADSQRLSVATKFKSQLFQL MQRLGNTTPHFIRCIKPNNIQSPGVYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFSRRYGFLLVENIADRDPLSV SVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSSFRGYQARCLLKELKRGISILQSFVRGEKIRK EFAELRRRHKAAATIQSQVKSKIARIQYKGIADASVVIQSAIRGWLVRRCSGDIGWLKSGGAKTNELGEVLVKASVLSEL QRRVLKAEAALREKEEENDILQQRLQQYENRWSEYETKMKSMEEIWQKQMRSLQSSLSIAKKSLAVEDSARNSDASVNAS DATDWDSSSNQFRSQTSNGVGSRLQPMSAGLSVIGRLAEEFEQRAQVFGDDAKFLVEVKSGQVEANLDPDRELRRLKQMF ETWKKDYGGRLRETKLILSKLGSEESSGSMEKVKRKWWGRRNSTRY* |
CDS seq | >AT3G19960.1 ATGTCTCAGAAGGTTACTCCATTCATGCAGTCACTTAAATCTTTGCCAGCAGACTATAGATTTGATGGTTCACCAGTCTC TGACCGCCTTGAAAATTCTTCTGGTGCAAGTGTTCGCTTGACCAATTCGAATGTTCCAAGAAAAGGTGGCTTAAGGAATG GTGTTAGTCGAACTGATACTGCTGCTGGGGATAGTGAGGATTCACCATATAGCGGGCACGGTGTTTTTGTTGAAGAGCAG TCTTTAACGGATGATGTAGATTCTGGAGCTGCTACAATGCCCTTGCCTCAGAGTGATGAACGCAGGTGGAGTGACACTAG TGCATATGCTCGAAAGAAGATACTGCAATCTTGGATTCAACTTCCAAATGGTAACTGGGAGCTTGGGAAGATATTGTCAA CTTCAGGGGAGGAGTCTGTTATATCTTTGCCCGAAGGAAAAGTTATAAAAGTCATATCAGAGACTCTAGTACCTGCAAAT CCTGATATTCTTGATGGAGTGGACGATCTTATGCAGCTTAGTTACTTAAATGAGCCATCAGTGTTGTACAACCTCAACTA TAGGTACAACCAAGACATGATATATACAAAAGCAGGGCCAGTTTTGGTGGCTGTGAATCCTTTTAAGGAGGTTCCTTTAT ACGGAAATCGATACATTGAAGCATACAGGAAGAAATCAAATGAGAGTCCTCATGTGTATGCAATTGCAGATACAGCAATT CGCGAAATGATACGCGATGAAGTTAACCAATCTATCATTATCAGCGGCGAGAGTGGAGCAGGGAAAACTGAGACTGCTAA AATAGCTATGCAATACTTGGCTGCTCTTGGAGGCGGAAGCGGGATCGAATATGAGATACTTAAGACTAATCCCATTTTGG AAGCATTTGGAAATGCAAAAACATTGAGAAATGATAATTCTAGTCGTTTTGGGAAGCTAATAGAGATTCATTTTAGTGAA AGTGGAAAGATATCGGGTGCTCAAATTCAAACCTTTTTACTAGAAAAGTCTAGAGTGGTCCAATGTGCTGAAGGGGAAAG GTCATATCATATTTTTTATCAACTTTGTGCTGGGGCTTCACCTGCACTTAGAGAGAAGCTAAATCTGACAAGCGCCCATG AGTATAAATATTTGGGACAGAGTAATTGTTATTCAATTAACGGAGTTGACGATGCTGAACGTTTTCACACTGTTAAGGAA GCTCTGGACATTGTGCATGTTAGTAAAGAAGATCAAGAAAGTGTATTTGCAATGCTTGCTGCAGTTTTATGGCTGGGAAA CGTTTCCTTCACCGTTATTGACAATGAAAACCATGTTGAACCTGTAGCAGATGAAAGTTTGTCAACTGTTGCTAAATTGA TTGGGTGCAACATCAATGAGCTTACGCTAACTTTATCGAAACGTAACATGAGAGTTAGGAATGATACCATTGTACAGAAG CTAACGCTACCACAGGCCATTGATGCAAGAGATGCTTTAGCAAAATCAATCTATTCGTGCCTGTTTGACTGGCTGGTTGA ACAGATCAACAAATCTCTTGCTGTGGGAAAGAGGCGAACTGGCAGATCTATCAGTATTCTTGATATCTACGGCTTTGAAT CATTTGATAAAAATAGCTTCGAGCAGTTCTGTATAAATTATGCAAATGAGAGATTGCAGCAACACTTTAACCGTCATCTA TTCAAGCTGGAGCAAGAGGAATATATCCAGGATGGCATTGACTGGACAAGGGTTGATTTTGAGGACAACCAAAATTGTCT GAGTCTTTTTGAAAAGAAACCATTGGGGCTGCTCTCCCTTTTGGATGAGGAATCTACATTTCCGAATGGCACAGATTTGA CACTTGCAAACAAGCTAAAACAGCATCTACAGTCTAATTCATGTTTCAGAGGAGATAAAGGGAAGCTTTTCACAGTTGTG CATTATGCAGGAGAGGTTACATATGAGACGACTGGATTTCTAGAGAAGAATAGAGACTTGTTGCATTCGGATTCTATTCA ACTTTTGTCCTCTTGTTCTTGCCTCCTTCCTCAAGCATTTGCTTCTAGCATGCTGATCCAATCTGAAAAACCCGTTGTGG GTCCTTTATACAAAGCAGGTGGTGCTGATTCCCAGCGTTTGAGTGTAGCTACTAAATTTAAGAGTCAACTCTTCCAATTG ATGCAACGTTTAGGAAACACTACCCCACATTTCATTCGCTGTATCAAGCCAAATAACATCCAGTCTCCCGGGGTGTATGA GCAAGGGCTTGTTTTACAGCAGCTAAGATGTTGTGGGGTCCTAGAAGTGGTTCGAATTTCACGGTCTGGATTTCCTACAA GAATGTCTCATCAGAAATTTTCCCGAAGATATGGTTTTCTTCTGGTGGAGAACATTGCTGATAGAGATCCTCTAAGTGTT TCAGTTGCGATTCTCCATCAGTTTAATATCTTGCCGGAGATGTATCAAGTTGGCTACACAAAGTTGTTTTTCAGAACTGG CCAGATTGGGGTTCTTGAGGACACAAGGAACCGTACTCTCCACGGCATTTTACGTGTTCAAAGTTCTTTTAGAGGATACC AAGCACGCTGTCTCCTGAAGGAACTTAAAAGGGGAATTTCTATTCTCCAATCATTTGTTCGTGGAGAGAAGATAAGAAAA GAGTTTGCTGAGTTACGAAGGAGGCATAAGGCTGCTGCTACTATACAGAGCCAAGTTAAAAGCAAGATTGCTAGGATACA GTATAAGGGCATAGCCGATGCATCAGTTGTGATACAATCAGCAATTCGTGGTTGGTTGGTTAGAAGATGTTCAGGGGATA TTGGATGGTTAAAATCTGGAGGTGCCAAGACAAATGAGTTAGGTGAGGTGCTAGTGAAAGCATCAGTACTTTCCGAGCTC CAACGCAGGGTACTTAAAGCGGAAGCTGCTCTGCGTGAAAAGGAAGAAGAGAACGACATTCTTCAGCAGAGGCTTCAACA ATATGAGAACCGGTGGTCAGAGTATGAGACAAAGATGAAATCAATGGAAGAAATCTGGCAAAAGCAAATGAGGTCGTTGC AGTCCAGTCTTTCCATAGCAAAGAAAAGCTTAGCTGTTGAGGACTCAGCGAGAAACTCAGATGCATCTGTCAATGCGAGT GATGCAACAGATTGGGATTCAAGCAGTAATCAGTTCAGGAGCCAAACAAGCAATGGAGTAGGGTCAAGACTACAGCCTAT GAGCGCAGGGCTGAGCGTGATTGGGCGGTTAGCAGAAGAATTCGAGCAGAGAGCTCAAGTGTTTGGTGATGATGCAAAGT TCTTGGTGGAAGTGAAATCTGGTCAGGTGGAAGCAAACTTGGACCCAGACAGAGAACTGAGGAGGCTGAAACAGATGTTT GAGACGTGGAAAAAGGATTATGGAGGGAGATTGCGGGAAACGAAACTGATACTGAGCAAGCTCGGGAGCGAAGAGAGCAG TGGTTCGATGGAGAAAGTGAAGAGGAAGTGGTGGGGAAGGAGAAATAGCACCAGGTATTGA |
Microexon DNA seq | TTTTACTAGAAAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CATTTTAGTGAAAGTGGAAAGATATCGGGTGCTCAAATTCAAACCTTTTTACTAGAAAAGTCTAGAGTGGTCCAATGTGCTGAAGGGGAAAGGTCATATCATATTTTT |
Microexon-tag Amino Acid seq | HFSESGKISGAQIQTFLLEKSRVVQCAEGERSYHIF |
Transcript ID | AT3G19960.2 |
Gene ID | At.14035 |
Gene Name | ATM1 |
Pfam domain motif | Myosin_head |
Motif E-value | 2.5e-213 |
Motif start | 167 |
Motif end | 801 |
Protein seq | >AT3G19960.2 MSQKVTPFMQSLKSLPADYRFDGSPVSDRLENSSGASVRLTNSNVPRKGGLRNGVSRTDTAAGDSEDSPYSGHGVFVEEQ SLTDDVDSGAATMPLPQSDERRWSDTSAYARKKILQSWIQLPNGNWELGKILSTSGEESVISLPEGKVIKVISETLVPAN PDILDGVDDLMQLSYLNEPSVLYNLNYRYNQDMIYTKAGPVLVAVNPFKEVPLYGNRYIEAYRKKSNESPHVYAIADTAI REMIRDEVNQSIIIRCICIHESMTYSISSSSGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRN DNSSRFGKLIEIHFSESGKISGAQIQTFLLEKSRVVQCAEGERSYHIFYQLCAGASPALREKLNLTSAHEYKYLGQSNCY SINGVDDAERFHTVKEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADESFLFHSLGSWCWKQECLLH NMCLSTVAKLIGCNINELTLTLSKRNMRVRNDTIVQKLTLPQAIDARDALAKSIYSCLFDWLVEQINKSLAVGKRRTGRS ISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWTRVDFEDNQNCLSLFEKKPLGLLSLLDE ESTFPNGTDLTLANKLKQHLQSNSCFRGDKGKLFTVVHYAGEVTYETTGFLEKNRDLLHSDSIQLLSSCSCLLPQAFASS MLIQSEKPVVGPLYKAGGADSQRLSVATKFKSQLFQLMQRLGNTTPHFIRCIKPNNIQSPGVYEQGLVLQQLRCCGVLEV LCKGPYKRFFIIAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSSFRGYQARCLLKELKRGISILQ SFVRGEKIRKEFAELRRRHKAAATIQSQVKSKIARIQYKGIADASVVIQSAIRGWLVRRCSGDIGWLKSGGAKTNELGEV LVKASVLSELQRRVLKAEAALREKEEENDILQQRLQQYENRWSEYETKMKSMEEIWQKQMRSLQSSLSIAKKSLAVEDSA RNSDASVNASDATDWDSSSNQFRSQTSNGVGSRLQPMSAGLSVIGRLAEEFEQRAQVFGDDAKFLVEVKSGQVEANLDPD RELRRLKQMFETWKKDYGGRLRETKLILSKLGSEESSGSMEKVKRKWWGRRNSTRY* |
CDS seq | >AT3G19960.2 ATGTCTCAGAAGGTTACTCCATTCATGCAGTCACTTAAATCTTTGCCAGCAGACTATAGATTTGATGGTTCACCAGTCTC TGACCGCCTTGAAAATTCTTCTGGTGCAAGTGTTCGCTTGACCAATTCGAATGTTCCAAGAAAAGGTGGCTTAAGGAATG GTGTTAGTCGAACTGATACTGCTGCTGGGGATAGTGAGGATTCACCATATAGCGGGCACGGTGTTTTTGTTGAAGAGCAG TCTTTAACGGATGATGTAGATTCTGGAGCTGCTACAATGCCCTTGCCTCAGAGTGATGAACGCAGGTGGAGTGACACTAG TGCATATGCTCGAAAGAAGATACTGCAATCTTGGATTCAACTTCCAAATGGTAACTGGGAGCTTGGGAAGATATTGTCAA CTTCAGGGGAGGAGTCTGTTATATCTTTGCCCGAAGGAAAAGTTATAAAAGTCATATCAGAGACTCTAGTACCTGCAAAT CCTGATATTCTTGATGGAGTGGACGATCTTATGCAGCTTAGTTACTTAAATGAGCCATCAGTGTTGTACAACCTCAACTA TAGGTACAACCAAGACATGATATATACAAAAGCAGGGCCAGTTTTGGTGGCTGTGAATCCTTTTAAGGAGGTTCCTTTAT ACGGAAATCGATACATTGAAGCATACAGGAAGAAATCAAATGAGAGTCCTCATGTGTATGCAATTGCAGATACAGCAATT CGCGAAATGATACGCGATGAAGTTAACCAATCTATCATTATCAGATGTATTTGTATTCATGAGTCCATGACCTATTCTAT TTCTTCTTCCAGCGGCGAGAGTGGAGCAGGGAAAACTGAGACTGCTAAAATAGCTATGCAATACTTGGCTGCTCTTGGAG GCGGAAGCGGGATCGAATATGAGATACTTAAGACTAATCCCATTTTGGAAGCATTTGGAAATGCAAAAACATTGAGAAAT GATAATTCTAGTCGTTTTGGGAAGCTAATAGAGATTCATTTTAGTGAAAGTGGAAAGATATCGGGTGCTCAAATTCAAAC CTTTTTACTAGAAAAGTCTAGAGTGGTCCAATGTGCTGAAGGGGAAAGGTCATATCATATTTTTTATCAACTTTGTGCTG GGGCTTCACCTGCACTTAGAGAGAAGCTAAATCTGACAAGCGCCCATGAGTATAAATATTTGGGACAGAGTAATTGTTAT TCAATTAACGGAGTTGACGATGCTGAACGTTTTCACACTGTTAAGGAAGCTCTGGACATTGTGCATGTTAGTAAAGAAGA TCAAGAAAGTGTATTTGCAATGCTTGCTGCAGTTTTATGGCTGGGAAACGTTTCCTTCACCGTTATTGACAATGAAAACC ATGTTGAACCTGTAGCAGATGAAAGTTTTTTGTTTCATTCTCTTGGGTCCTGGTGTTGGAAACAAGAATGTTTGCTGCAT AATATGTGTTTGTCAACTGTTGCTAAATTGATTGGGTGCAACATCAATGAGCTTACGCTAACTTTATCGAAACGTAACAT GAGAGTTAGGAATGATACCATTGTACAGAAGCTAACGCTACCACAGGCCATTGATGCAAGAGATGCTTTAGCAAAATCAA TCTATTCGTGCCTGTTTGACTGGCTGGTTGAACAGATCAACAAATCTCTTGCTGTGGGAAAGAGGCGAACTGGCAGATCT ATCAGTATTCTTGATATCTACGGCTTTGAATCATTTGATAAAAATAGCTTCGAGCAGTTCTGTATAAATTATGCAAATGA GAGATTGCAGCAACACTTTAACCGTCATCTATTCAAGCTGGAGCAAGAGGAATATATCCAGGATGGCATTGACTGGACAA GGGTTGATTTTGAGGACAACCAAAATTGTCTGAGTCTTTTTGAAAAGAAACCATTGGGGCTGCTCTCCCTTTTGGATGAG GAATCTACATTTCCGAATGGCACAGATTTGACACTTGCAAACAAGCTAAAACAGCATCTACAGTCTAATTCATGTTTCAG AGGAGATAAAGGGAAGCTTTTCACAGTTGTGCATTATGCAGGAGAGGTTACATATGAGACGACTGGATTTCTAGAGAAGA ATAGAGACTTGTTGCATTCGGATTCTATTCAACTTTTGTCCTCTTGTTCTTGCCTCCTTCCTCAAGCATTTGCTTCTAGC ATGCTGATCCAATCTGAAAAACCCGTTGTGGGTCCTTTATACAAAGCAGGTGGTGCTGATTCCCAGCGTTTGAGTGTAGC TACTAAATTTAAGAGTCAACTCTTCCAATTGATGCAACGTTTAGGAAACACTACCCCACATTTCATTCGCTGTATCAAGC CAAATAACATCCAGTCTCCCGGGGTGTATGAGCAAGGGCTTGTTTTACAGCAGCTAAGATGTTGTGGGGTCCTAGAAGTG TTGTGCAAGGGACCGTACAAGCGTTTCTTCATAATTGCGATTCTCCATCAGTTTAATATCTTGCCGGAGATGTATCAAGT TGGCTACACAAAGTTGTTTTTCAGAACTGGCCAGATTGGGGTTCTTGAGGACACAAGGAACCGTACTCTCCACGGCATTT TACGTGTTCAAAGTTCTTTTAGAGGATACCAAGCACGCTGTCTCCTGAAGGAACTTAAAAGGGGAATTTCTATTCTCCAA TCATTTGTTCGTGGAGAGAAGATAAGAAAAGAGTTTGCTGAGTTACGAAGGAGGCATAAGGCTGCTGCTACTATACAGAG CCAAGTTAAAAGCAAGATTGCTAGGATACAGTATAAGGGCATAGCCGATGCATCAGTTGTGATACAATCAGCAATTCGTG GTTGGTTGGTTAGAAGATGTTCAGGGGATATTGGATGGTTAAAATCTGGAGGTGCCAAGACAAATGAGTTAGGTGAGGTG CTAGTGAAAGCATCAGTACTTTCCGAGCTCCAACGCAGGGTACTTAAAGCGGAAGCTGCTCTGCGTGAAAAGGAAGAAGA GAACGACATTCTTCAGCAGAGGCTTCAACAATATGAGAACCGGTGGTCAGAGTATGAGACAAAGATGAAATCAATGGAAG AAATCTGGCAAAAGCAAATGAGGTCGTTGCAGTCCAGTCTTTCCATAGCAAAGAAAAGCTTAGCTGTTGAGGACTCAGCG AGAAACTCAGATGCATCTGTCAATGCGAGTGATGCAACAGATTGGGATTCAAGCAGTAATCAGTTCAGGAGCCAAACAAG CAATGGAGTAGGGTCAAGACTACAGCCTATGAGCGCAGGGCTGAGCGTGATTGGGCGGTTAGCAGAAGAATTCGAGCAGA GAGCTCAAGTGTTTGGTGATGATGCAAAGTTCTTGGTGGAAGTGAAATCTGGTCAGGTGGAAGCAAACTTGGACCCAGAC AGAGAACTGAGGAGGCTGAAACAGATGTTTGAGACGTGGAAAAAGGATTATGGAGGGAGATTGCGGGAAACGAAACTGAT ACTGAGCAAGCTCGGGAGCGAAGAGAGCAGTGGTTCGATGGAGAAAGTGAAGAGGAAGTGGTGGGGAAGGAGAAATAGCA CCAGGTATTGA |