
Microexon ID | At_1:18652603-18652616:+ |
Species | Arabidopsis thaliana | Coordinates | 1:18652603..18652616 |
Microexon Cluster ID | MEP38 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Myosin_head |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CAYTTYARTRMAACTGGRAARATATSTGGTGCYAADATTCAAACWTTTYTRCTTGARAAGTCWAGAGTWGTYCARYKTGCWGAWGGWGARAGRTCATAYCATATWTTT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTTACTAGAAAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CATTTTAGTGAAACAGGGAAGATTTCGGGTGCTCAAATTCAAACATTTTTACTAGAAAAGTCAAGAGTGGTTCAATGTACGGAAGGAGAAAGGTCATATCATATATTC |
Microexon-tag Amino Acid Seq | HFSETGKISGAQIQTFLLEKSRVVQCTEGERSYHIF |
Microexon-tag spanning region | 18652464-18652763 |
Microexon-tag prediction score | 0.9661 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT1G50360.1x |
Reference Transcript ID | AT1G50360.1 |
Gene ID | AT1G50360 |
Gene Name | VIII-A |
Transcript ID | AT1G50360.1 |
Protein ID | AT1G50360.1 |
Gene ID | AT1G50360 |
Gene Name | VIII-A |
Pfam domain motif | Myosin_head |
Motif E-value | 8e-245 |
Motif start | 159 |
Motif end | 817 |
Protein seq | >AT1G50360.1 MAHKVKASFQSLKTMPADYRFLGSPISDHLETNLITPPNGHLKNGVNGTASSVGGMDSVNEDSPYSVRSILNGERSSIGD GDSILPLPESNDRKWSDTNVYARKKVLQFWVQLPNGNWELGKIMSTSGEESVIVVTEGKVLKVKSETLVPANPDILDGVD DLMQLSYLNEPAVLYNLEYRYNQDMIYTKAGPVLVAVNPFKEVPLYGNRNIEAYRKRSNESPHVYAIADTAIREMIRDEV NQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGAQ IQTFLLEKSRVVQCTEGERSYHIFYQLCAGASPTLREKLNLTSAKQYNYLKQSNCYSINGVDDAERFHAVKEALDIVHVS KEDQENVFAMLAAVLWLGNVSFTIIDNENHVEPEPDESLSTVAKLIGCNINELKLALSKRNMRVNNDTIVQKLTLSQAID ARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNKNSFEQFCINYANERLQQHFNRHLFKLEQEEY IQDGIDWTRVDFEDNQECLSLFEKKPLGLLSLLDEESTFPNGTDLTLANKLKQHLNDNSCFRGDRGKAFTVAHYAGEVTY ETTGFLEKNRDLLHSDSIQLLSSCSCHLPQAFASSMLIYSEKPLVGPLHKAGGADSQRLSVATKFKGQLFQLMQRLGNTT PHFIRCIKPNNVQSAGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMFHHKFARRYGFLLLENIAAKDPLSVSVAILHQF NILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRLQSYFRGHQARCRLKELKTGITILQSFVRGEKMRKEYTELLQR HRASAAIQSHVKRRIASQQYKATVDASAVIQSAIRGELVRRCAGDIGWLSSGGTKRNESDEVLVKASYLSDLQRRVLRTE AALREKEEENDILRQRVQQYDNRWSEYETKMKSMEEIWQKQMKSLQSSLSIAKKSLEVEDSARNSDASVNASDATDLDSG GSHYQMGHGRSRSVGVGLSVISRLAEEFGQRAQVFGDDRKFLMEVKSGQVEANLNPDRELRRLKQMFETWKKDYGGRLRE TKLILSKLGSEETGGSAEKVKMNWWGRLRSTRY* |
CDS seq | >AT1G50360.1 ATGGCACACAAGGTTAAGGCATCTTTTCAGTCACTTAAAACGATGCCGGCTGACTATAGATTTCTTGGTTCACCAATCTC TGATCACCTTGAGACCAATTTGATTACTCCACCAAATGGTCACTTAAAGAATGGGGTTAATGGCACTGCAAGTTCTGTTG GTGGAATGGATAGTGTTAATGAGGATTCACCTTATAGTGTCCGCAGCATTTTAAATGGAGAGCGGTCTTCAATTGGTGAT GGAGATTCTATTTTGCCCTTGCCTGAGAGTAATGATCGCAAGTGGAGCGACACAAATGTATATGCTCGGAAAAAGGTACT GCAATTTTGGGTCCAACTTCCAAACGGTAACTGGGAGCTGGGAAAGATAATGTCAACTTCAGGAGAAGAGTCTGTTATCG TGGTAACTGAGGGAAAAGTTTTAAAAGTCAAATCAGAGACTTTAGTACCTGCAAATCCTGATATTCTTGATGGAGTAGAC GATCTCATGCAACTAAGTTATTTAAATGAGCCAGCAGTGTTGTACAACCTTGAGTATAGGTACAACCAGGACATGATATA TACAAAAGCAGGGCCGGTTCTGGTGGCTGTGAATCCCTTCAAGGAGGTTCCTTTGTACGGTAATCGCAACATTGAAGCAT ACAGGAAGAGATCAAATGAGAGCCCTCATGTCTATGCTATTGCAGATACAGCAATACGTGAAATGATACGAGATGAAGTT AACCAATCAATCATTATCAGTGGAGAGAGTGGAGCAGGAAAGACTGAGACAGCAAAGATAGCGATGCAATACTTGGCTGC TCTTGGAGGTGGAAGTGGGATCGAGTATGAGATACTAAAGACTAATCCCATCTTGGAAGCATTTGGAAATGCAAAAACAT TGAGAAACGATAATTCTAGTCGTTTTGGTAAGTTGATAGAAATTCATTTTAGTGAAACAGGGAAGATTTCGGGTGCTCAA ATTCAAACATTTTTACTAGAAAAGTCAAGAGTGGTTCAATGTACGGAAGGAGAAAGGTCATATCATATATTCTATCAACT TTGTGCTGGGGCTTCACCTACACTTAGAGAGAAGTTAAATTTGACAAGTGCAAAACAGTATAACTATTTGAAACAAAGCA ATTGCTATTCAATTAACGGAGTTGATGACGCTGAACGTTTTCACGCCGTTAAGGAAGCTTTAGATATTGTGCATGTTAGT AAAGAAGATCAAGAAAATGTATTTGCAATGCTTGCTGCAGTATTATGGCTAGGGAATGTTTCTTTTACCATTATTGACAA CGAAAATCACGTTGAACCTGAACCAGATGAAAGTTTGTCAACTGTTGCTAAATTGATTGGGTGCAACATCAATGAGCTTA AGCTAGCTCTATCAAAGCGTAATATGAGAGTTAATAATGATACTATTGTACAGAAGCTAACACTATCGCAGGCCATTGAC GCAAGAGATGCTTTAGCAAAGTCAATCTATGCCTGCCTATTTGACTGGCTAGTTGAACAGATTAACAAATCTCTTGCGGT GGGAAAGAGGAGAACTGGCAGATCCATCAGCATTCTTGATATCTATGGCTTTGAATCATTCAATAAAAATAGTTTTGAGC AGTTCTGTATAAATTATGCAAATGAGAGATTGCAGCAACACTTCAACCGTCATCTCTTCAAGCTTGAGCAGGAGGAATAT ATTCAGGATGGCATTGACTGGACAAGGGTTGATTTTGAGGACAACCAAGAATGTCTTAGTCTCTTTGAAAAGAAACCATT AGGGCTGCTTTCTCTTCTGGATGAGGAATCCACATTTCCAAATGGCACAGATTTGACACTTGCCAACAAGCTTAAACAAC ATCTAAATGATAATTCCTGTTTTAGAGGAGATCGGGGGAAGGCTTTCACAGTTGCGCATTATGCTGGAGAGGTTACATAT GAGACGACTGGATTTCTAGAGAAGAACCGAGATTTGTTGCATTCAGATTCTATTCAACTTTTGTCGTCTTGCTCTTGCCA CCTCCCTCAGGCGTTTGCTTCTAGTATGCTCATTTATTCTGAAAAACCTCTTGTCGGTCCTTTACACAAAGCAGGTGGAG CTGATTCCCAGCGACTGAGTGTAGCAACTAAATTTAAGGGTCAACTTTTCCAATTGATGCAACGTCTAGGGAACACTACC CCACATTTTATTCGCTGCATAAAGCCAAACAATGTTCAGTCTGCCGGGTTGTATGAGCAAGGACTTGTCTTACAGCAGCT AAGATGTTGTGGTGTCCTAGAGGTCGTTCGAATATCCCGGTCTGGATTTCCCACGAGAATGTTTCATCATAAATTTGCCC GAAGGTATGGTTTCCTTCTGCTGGAGAACATTGCAGCAAAAGATCCTCTAAGTGTTTCGGTTGCAATTCTCCATCAGTTT AATATCTTGCCAGAGATGTACCAAGTTGGCTACACAAAATTGTTTTTCAGAACTGGCCAGATTGGGGTTCTTGAAGATAC AAGGAATCGCACTCTGCATGGCATTTTACGTCTTCAAAGTTATTTTAGAGGGCACCAAGCTCGCTGTCGTCTAAAAGAGC TTAAAACCGGAATTACTATTCTTCAATCATTTGTTCGTGGAGAAAAGATGAGAAAGGAATACACGGAGTTACTGCAGAGG CATCGAGCTTCTGCTGCTATACAAAGCCATGTTAAGAGAAGGATTGCTAGCCAACAGTATAAAGCCACAGTTGATGCATC TGCTGTAATACAATCAGCAATTCGTGGAGAGCTGGTTAGAAGATGTGCGGGGGATATTGGATGGCTTAGTTCTGGTGGCA CCAAGAGAAATGAGTCAGACGAGGTGCTAGTGAAGGCATCATATCTTTCCGATCTTCAGCGTAGGGTTCTTAGAACCGAA GCTGCTCTTCGTGAGAAAGAAGAGGAGAACGACATCCTCCGACAAAGAGTCCAGCAGTACGATAACCGGTGGTCTGAATA TGAAACAAAGATGAAATCCATGGAAGAAATTTGGCAAAAGCAGATGAAATCTTTGCAATCCAGTCTTTCCATCGCAAAGA AAAGCCTAGAGGTTGAGGACTCAGCGAGAAACTCGGATGCATCGGTGAATGCAAGCGATGCAACAGATTTAGATTCAGGA GGTAGTCATTACCAAATGGGCCATGGCAGGTCAAGAAGTGTAGGCGTGGGTTTAAGCGTGATAAGCCGGTTAGCTGAGGA ATTTGGACAAAGAGCTCAGGTATTTGGTGACGACAGAAAGTTCTTGATGGAAGTGAAATCTGGTCAGGTGGAAGCAAACT TGAATCCGGACCGGGAGCTACGAAGGCTGAAACAGATGTTTGAGACATGGAAGAAAGATTATGGAGGGAGACTAAGGGAA ACGAAACTGATACTTAGCAAACTTGGGAGTGAAGAAACAGGTGGTTCAGCGGAGAAGGTGAAGATGAATTGGTGGGGGAG GTTGAGGAGTACTAGGTATTAA |
Microexon DNA seq | TTTTACTAGAAAAG |
Microexon Amino Acid seq | FLLEK |
Microexon-tag DNA Seq | CATTTTAGTGAAACAGGGAAGATTTCGGGTGCTCAAATTCAAACATTTTTACTAGAAAAGTCAAGAGTGGTTCAATGTACGGAAGGAGAAAGGTCATATCATATATTC |
Microexon-tag Amino Acid seq | HFSETGKISGAQIQTFLLEKSRVVQCTEGERSYHIF |
Transcript ID | AT1G50360.1 |
Gene ID | At.4242 |
Gene Name | VIII-A |
Pfam domain motif | Myosin_head |
Motif E-value | 8e-245 |
Motif start | 159 |
Motif end | 817 |
Protein seq | >AT1G50360.1 MAHKVKASFQSLKTMPADYRFLGSPISDHLETNLITPPNGHLKNGVNGTASSVGGMDSVNEDSPYSVRSILNGERSSIGD GDSILPLPESNDRKWSDTNVYARKKVLQFWVQLPNGNWELGKIMSTSGEESVIVVTEGKVLKVKSETLVPANPDILDGVD DLMQLSYLNEPAVLYNLEYRYNQDMIYTKAGPVLVAVNPFKEVPLYGNRNIEAYRKRSNESPHVYAIADTAIREMIRDEV NQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGAQ IQTFLLEKSRVVQCTEGERSYHIFYQLCAGASPTLREKLNLTSAKQYNYLKQSNCYSINGVDDAERFHAVKEALDIVHVS KEDQENVFAMLAAVLWLGNVSFTIIDNENHVEPEPDESLSTVAKLIGCNINELKLALSKRNMRVNNDTIVQKLTLSQAID ARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNKNSFEQFCINYANERLQQHFNRHLFKLEQEEY IQDGIDWTRVDFEDNQECLSLFEKKPLGLLSLLDEESTFPNGTDLTLANKLKQHLNDNSCFRGDRGKAFTVAHYAGEVTY ETTGFLEKNRDLLHSDSIQLLSSCSCHLPQAFASSMLIYSEKPLVGPLHKAGGADSQRLSVATKFKGQLFQLMQRLGNTT PHFIRCIKPNNVQSAGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMFHHKFARRYGFLLLENIAAKDPLSVSVAILHQF NILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRLQSYFRGHQARCRLKELKTGITILQSFVRGEKMRKEYTELLQR HRASAAIQSHVKRRIASQQYKATVDASAVIQSAIRGELVRRCAGDIGWLSSGGTKRNESDEVLVKASYLSDLQRRVLRTE AALREKEEENDILRQRVQQYDNRWSEYETKMKSMEEIWQKQMKSLQSSLSIAKKSLEVEDSARNSDASVNASDATDLDSG GSHYQMGHGRSRSVGVGLSVISRLAEEFGQRAQVFGDDRKFLMEVKSGQVEANLNPDRELRRLKQMFETWKKDYGGRLRE TKLILSKLGSEETGGSAEKVKMNWWGRLRSTRY* |
CDS seq | >AT1G50360.1 ATGGCACACAAGGTTAAGGCATCTTTTCAGTCACTTAAAACGATGCCGGCTGACTATAGATTTCTTGGTTCACCAATCTC TGATCACCTTGAGACCAATTTGATTACTCCACCAAATGGTCACTTAAAGAATGGGGTTAATGGCACTGCAAGTTCTGTTG GTGGAATGGATAGTGTTAATGAGGATTCACCTTATAGTGTCCGCAGCATTTTAAATGGAGAGCGGTCTTCAATTGGTGAT GGAGATTCTATTTTGCCCTTGCCTGAGAGTAATGATCGCAAGTGGAGCGACACAAATGTATATGCTCGGAAAAAGGTACT GCAATTTTGGGTCCAACTTCCAAACGGTAACTGGGAGCTGGGAAAGATAATGTCAACTTCAGGAGAAGAGTCTGTTATCG TGGTAACTGAGGGAAAAGTTTTAAAAGTCAAATCAGAGACTTTAGTACCTGCAAATCCTGATATTCTTGATGGAGTAGAC GATCTCATGCAACTAAGTTATTTAAATGAGCCAGCAGTGTTGTACAACCTTGAGTATAGGTACAACCAGGACATGATATA TACAAAAGCAGGGCCGGTTCTGGTGGCTGTGAATCCCTTCAAGGAGGTTCCTTTGTACGGTAATCGCAACATTGAAGCAT ACAGGAAGAGATCAAATGAGAGCCCTCATGTCTATGCTATTGCAGATACAGCAATACGTGAAATGATACGAGATGAAGTT AACCAATCAATCATTATCAGTGGAGAGAGTGGAGCAGGAAAGACTGAGACAGCAAAGATAGCGATGCAATACTTGGCTGC TCTTGGAGGTGGAAGTGGGATCGAGTATGAGATACTAAAGACTAATCCCATCTTGGAAGCATTTGGAAATGCAAAAACAT TGAGAAACGATAATTCTAGTCGTTTTGGTAAGTTGATAGAAATTCATTTTAGTGAAACAGGGAAGATTTCGGGTGCTCAA ATTCAAACATTTTTACTAGAAAAGTCAAGAGTGGTTCAATGTACGGAAGGAGAAAGGTCATATCATATATTCTATCAACT TTGTGCTGGGGCTTCACCTACACTTAGAGAGAAGTTAAATTTGACAAGTGCAAAACAGTATAACTATTTGAAACAAAGCA ATTGCTATTCAATTAACGGAGTTGATGACGCTGAACGTTTTCACGCCGTTAAGGAAGCTTTAGATATTGTGCATGTTAGT AAAGAAGATCAAGAAAATGTATTTGCAATGCTTGCTGCAGTATTATGGCTAGGGAATGTTTCTTTTACCATTATTGACAA CGAAAATCACGTTGAACCTGAACCAGATGAAAGTTTGTCAACTGTTGCTAAATTGATTGGGTGCAACATCAATGAGCTTA AGCTAGCTCTATCAAAGCGTAATATGAGAGTTAATAATGATACTATTGTACAGAAGCTAACACTATCGCAGGCCATTGAC GCAAGAGATGCTTTAGCAAAGTCAATCTATGCCTGCCTATTTGACTGGCTAGTTGAACAGATTAACAAATCTCTTGCGGT GGGAAAGAGGAGAACTGGCAGATCCATCAGCATTCTTGATATCTATGGCTTTGAATCATTCAATAAAAATAGTTTTGAGC AGTTCTGTATAAATTATGCAAATGAGAGATTGCAGCAACACTTCAACCGTCATCTCTTCAAGCTTGAGCAGGAGGAATAT ATTCAGGATGGCATTGACTGGACAAGGGTTGATTTTGAGGACAACCAAGAATGTCTTAGTCTCTTTGAAAAGAAACCATT AGGGCTGCTTTCTCTTCTGGATGAGGAATCCACATTTCCAAATGGCACAGATTTGACACTTGCCAACAAGCTTAAACAAC ATCTAAATGATAATTCCTGTTTTAGAGGAGATCGGGGGAAGGCTTTCACAGTTGCGCATTATGCTGGAGAGGTTACATAT GAGACGACTGGATTTCTAGAGAAGAACCGAGATTTGTTGCATTCAGATTCTATTCAACTTTTGTCGTCTTGCTCTTGCCA CCTCCCTCAGGCGTTTGCTTCTAGTATGCTCATTTATTCTGAAAAACCTCTTGTCGGTCCTTTACACAAAGCAGGTGGAG CTGATTCCCAGCGACTGAGTGTAGCAACTAAATTTAAGGGTCAACTTTTCCAATTGATGCAACGTCTAGGGAACACTACC CCACATTTTATTCGCTGCATAAAGCCAAACAATGTTCAGTCTGCCGGGTTGTATGAGCAAGGACTTGTCTTACAGCAGCT AAGATGTTGTGGTGTCCTAGAGGTCGTTCGAATATCCCGGTCTGGATTTCCCACGAGAATGTTTCATCATAAATTTGCCC GAAGGTATGGTTTCCTTCTGCTGGAGAACATTGCAGCAAAAGATCCTCTAAGTGTTTCGGTTGCAATTCTCCATCAGTTT AATATCTTGCCAGAGATGTACCAAGTTGGCTACACAAAATTGTTTTTCAGAACTGGCCAGATTGGGGTTCTTGAAGATAC AAGGAATCGCACTCTGCATGGCATTTTACGTCTTCAAAGTTATTTTAGAGGGCACCAAGCTCGCTGTCGTCTAAAAGAGC TTAAAACCGGAATTACTATTCTTCAATCATTTGTTCGTGGAGAAAAGATGAGAAAGGAATACACGGAGTTACTGCAGAGG CATCGAGCTTCTGCTGCTATACAAAGCCATGTTAAGAGAAGGATTGCTAGCCAACAGTATAAAGCCACAGTTGATGCATC TGCTGTAATACAATCAGCAATTCGTGGAGAGCTGGTTAGAAGATGTGCGGGGGATATTGGATGGCTTAGTTCTGGTGGCA CCAAGAGAAATGAGTCAGACGAGGTGCTAGTGAAGGCATCATATCTTTCCGATCTTCAGCGTAGGGTTCTTAGAACCGAA GCTGCTCTTCGTGAGAAAGAAGAGGAGAACGACATCCTCCGACAAAGAGTCCAGCAGTACGATAACCGGTGGTCTGAATA TGAAACAAAGATGAAATCCATGGAAGAAATTTGGCAAAAGCAGATGAAATCTTTGCAATCCAGTCTTTCCATCGCAAAGA AAAGCCTAGAGGTTGAGGACTCAGCGAGAAACTCGGATGCATCGGTGAATGCAAGCGATGCAACAGATTTAGATTCAGGA GGTAGTCATTACCAAATGGGCCATGGCAGGTCAAGAAGTGTAGGCGTGGGTTTAAGCGTGATAAGCCGGTTAGCTGAGGA ATTTGGACAAAGAGCTCAGGTATTTGGTGACGACAGAAAGTTCTTGATGGAAGTGAAATCTGGTCAGGTGGAAGCAAACT TGAATCCGGACCGGGAGCTACGAAGGCTGAAACAGATGTTTGAGACATGGAAGAAAGATTATGGAGGGAGACTAAGGGAA ACGAAACTGATACTTAGCAAACTTGGGAGTGAAGAAACAGGTGGTTCAGCGGAGAAGGTGAAGATGAATTGGTGGGGGAG GTTGAGGAGTACTAGGTATTAA |