Microexon ID Zm_7:144110413-144110426:+
Species Zea mays
Coordinates 7:144110413..144110426
Microexon Cluster ID MEP37
Size 14
Phase 1
Pfam Domain Motif Trigger_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGAAAACTCCAGAC
Microexon Amino Acid seq GKTPD
Microexon-tag DNA Seq GTTGCCGCCGCACAACCCCTTCCTGGTTTTCGACGAATGAAAGGAGGGAAAACTCCAGACATACCGAAAGAAGTCGCTCTACACTTAATTGGGCCATCAAAAGTGAAG
Microexon-tag Amino Acid Seq VAAAQPLPGFRRMKGGKTPDIPKEVALHLIGPSKVK
Microexon-tag spanning region144110090-144110589
Microexon-tag prediction score0.9535
Overlapped with the annotated transcript (%) 100
New Transcript ID Zm00001d021148_T001x
Reference Transcript ID Zm00001d021148_T001
Gene ID Zm00001d021148
Gene Name NA
Transcript ID Zm00001d021148_T001
Protein ID Zm00001d021148_P001
Gene ID Zm00001d021148
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 6.9e-09
Motif start 12
Motif end 132
Protein seq >Zm00001d021148_P001
MQSLVSFSDFSVSVCTEENSLIKLQVHVSGTITDSIFKKVFTKNVAAAQPLPGFRRMKGGKTPDIPKEVALHLIGPSKVK
KETIMKIINSTVVEYVRKEGLTASKNLSVQHSYEELEAAFEPGKELCFGATVRLD
CDS seq >Zm00001d021148_T001
ATGCAGTCGTTAGTATCTTTCAGTGACTTCTCTGTTTCAGTGTGTACTGAAGAGAATAGTCTGATAAAGCTACAGGTCCA
TGTATCTGGCACAATAACAGATTCCATCTTCAAGAAAGTTTTCACAAAGAATGTTGCCGCCGCACAACCCCTTCCTGGTT
TTCGACGAATGAAAGGAGGGAAAACTCCAGACATACCGAAAGAAGTCGCTCTACACTTAATTGGGCCATCAAAAGTGAAG
AAAGAAACCATAATGAAAATTATAAATAGCACGGTTGTTGAGTATGTTCGAAAGGAGGGCCTGACTGCATCAAAGAATCT
GAGTGTTCAGCATAGCTACGAAGAACTTGAAGCAGCATTTGAGCCAGGGAAAGAATTATGCTTTGGCGCGACAGTTCGTT
TAGAC
Zm_7:144110413-144110426:+ does not have available information here.