
Microexon ID | Zm_7:144110413-144110426:+ |
Species | Zea mays | Coordinates | 7:144110413..144110426 |
Microexon Cluster ID | MEP37 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Trigger_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGAAAACTCCAGAC |
Microexon Amino Acid seq | GKTPD |
Microexon-tag DNA Seq | GTTGCCGCCGCACAACCCCTTCCTGGTTTTCGACGAATGAAAGGAGGGAAAACTCCAGACATACCGAAAGAAGTCGCTCTACACTTAATTGGGCCATCAAAAGTGAAG |
Microexon-tag Amino Acid Seq | VAAAQPLPGFRRMKGGKTPDIPKEVALHLIGPSKVK |
Microexon-tag spanning region | 144110090-144110589 |
Microexon-tag prediction score | 0.9535 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Zm00001d021148_T001x |
Reference Transcript ID | Zm00001d021148_T001 |
Gene ID | Zm00001d021148 |
Gene Name | NA |
Transcript ID | Zm00001d021148_T001 |
Protein ID | Zm00001d021148_P001 |
Gene ID | Zm00001d021148 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 6.9e-09 |
Motif start | 12 |
Motif end | 132 |
Protein seq | >Zm00001d021148_P001 MQSLVSFSDFSVSVCTEENSLIKLQVHVSGTITDSIFKKVFTKNVAAAQPLPGFRRMKGGKTPDIPKEVALHLIGPSKVK KETIMKIINSTVVEYVRKEGLTASKNLSVQHSYEELEAAFEPGKELCFGATVRLD |
CDS seq | >Zm00001d021148_T001 ATGCAGTCGTTAGTATCTTTCAGTGACTTCTCTGTTTCAGTGTGTACTGAAGAGAATAGTCTGATAAAGCTACAGGTCCA TGTATCTGGCACAATAACAGATTCCATCTTCAAGAAAGTTTTCACAAAGAATGTTGCCGCCGCACAACCCCTTCCTGGTT TTCGACGAATGAAAGGAGGGAAAACTCCAGACATACCGAAAGAAGTCGCTCTACACTTAATTGGGCCATCAAAAGTGAAG AAAGAAACCATAATGAAAATTATAAATAGCACGGTTGTTGAGTATGTTCGAAAGGAGGGCCTGACTGCATCAAAGAATCT GAGTGTTCAGCATAGCTACGAAGAACTTGAAGCAGCATTTGAGCCAGGGAAAGAATTATGCTTTGGCGCGACAGTTCGTT TAGAC |
Zm_7:144110413-144110426:+ does not have available information here.