Microexon ID Zm_3:171047237-171047250:+
Species Zea mays
Coordinates 3:171047237..171047250
Microexon Cluster ID MEP37
Size 14
Phase 1
Pfam Domain Motif Trigger_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGAAAACATCAAAT
Microexon Amino Acid seq GKTSN
Microexon-tag DNA Seq GCCCGTGATGCGCCACCGGTTCCTGGTTTTAGAAAGTCCAAAGGAGGGAAAACATCAAATATACCCAGCAGCATCCTGCTGCAGATGCTTGGCAAGAGCCGGGTCACC
Microexon-tag Amino Acid Seq ARDAPPVPGFRKSKGGKTSNIPSSILLQMLGKSRVT
Microexon-tag spanning region171046976-171047587
Microexon-tag prediction score0.9486
Overlapped with the annotated transcript (%) 100
New Transcript ID Zm00001d042533_T001x
Reference Transcript ID Zm00001d042533_T001
Gene ID Zm00001d042533
Gene Name NA
Transcript ID Zm00001d042533_T001
Protein ID Zm00001d042533_P001
Gene ID Zm00001d042533
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 1.7e-10
Motif start 88
Motif end 191
Protein seq >Zm00001d042533_P001
MASAATATLPKVQLRPRCNSYFQVTGQVHAHTKTCGACKCPTHIHGLLVSAGGRRTFLPVSAVGSGQGSSVTEADRKSDL
SLENVKTSVVSRDGEKINVRVQLPGKATQKVFDEALTFLARDAPPVPGFRKSKGGKTSNIPSSILLQMLGKSRVTKFVLQ
EILSITIEEFVKKENLKVKPEIQTTQSEGEMESAFAPGSAFGFNVVLQLETPDSDDPEEKPGSDDDLQEESGSSE*
CDS seq >Zm00001d042533_T001
ATGGCCTCGGCTGCTACTGCAACCCTCCCCAAGGTTCAGTTGAGGCCAAGATGCAACAGCTACTTCCAGGTGACCGGTCA
AGTCCATGCCCACACCAAAACATGCGGTGCCTGCAAGTGTCCGACCCATATCCACGGGTTGCTTGTTTCAGCTGGAGGAA
GGAGGACATTCCTGCCGGTGTCTGCAGTTGGATCAGGTCAGGGCTCATCGGTCACTGAGGCCGACAGGAAGAGCGATTTG
TCGCTGGAGAACGTCAAGACGTCCGTTGTATCCCGCGACGGTGAAAAGATTAATGTACGAGTGCAGTTGCCTGGAAAGGC
GACGCAAAAGGTGTTTGATGAGGCTCTGACGTTCTTGGCCCGTGATGCGCCACCGGTTCCTGGTTTTAGAAAGTCCAAAG
GAGGGAAAACATCAAATATACCCAGCAGCATCCTGCTGCAGATGCTTGGCAAGAGCCGGGTCACCAAATTCGTTCTTCAG
GAAATACTGAGCATCACCATTGAAGAATTTGTCAAGAAGGAAAACCTGAAGGTGAAACCTGAGATCCAGACAACCCAGTC
CGAAGGCGAGATGGAGTCCGCGTTCGCGCCGGGATCAGCATTTGGGTTCAATGTTGTCCTTCAGCTCGAGACACCTGACT
CTGATGATCCAGAGGAGAAACCTGGCTCTGATGACGATTTACAGGAGGAATCTGGTTCCTCGGAGTAG
Microexon DNA seq GGAAAACATCAAAT
Microexon Amino Acid seq GKTSN
Microexon-tag DNA Seq GCCCGTGATGCGCCACCGGTTCCTGGTTTTAGAAAGTCCAAAGGAGGGAAAACATCAAATATACCCAGCAGCATCCTGCTGCAGATGCTTGGCAAGAGCCGGGTCACC
Microexon-tag Amino Acid seq ARDAPPVPGFRKSKGGKTSNIPSSILLQMLGKSRVT
Transcript ID Zm00001d042533_T001
Gene ID Zm.15619
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 1.7e-10
Motif start 88
Motif end 191
Protein seq >Zm00001d042533_T001
MASAATATLPKVQLRPRCNSYFQVTGQVHAHTKTCGACKCPTHIHGLLVSAGGRRTFLPVSAVGSGQGSSVTEADRKSDL
SLENVKTSVVSRDGEKINVRVQLPGKATQKVFDEALTFLARDAPPVPGFRKSKGGKTSNIPSSILLQMLGKSRVTKFVLQ
EILSITIEEFVKKENLKVKPEIQTTQSEGEMESAFAPGSAFGFNVVLQLETPDSDDPEEKPGSDDDLQEESGSSE*
CDS seq >Zm00001d042533_T001
ATGGCCTCGGCTGCTACTGCAACCCTCCCCAAGGTTCAGTTGAGGCCAAGATGCAACAGCTACTTCCAGGTGACCGGTCA
AGTCCATGCCCACACCAAAACATGCGGTGCCTGCAAGTGTCCGACCCATATCCACGGGTTGCTTGTTTCAGCTGGAGGAA
GGAGGACATTCCTGCCGGTGTCTGCAGTTGGATCAGGTCAGGGCTCATCGGTCACTGAGGCCGACAGGAAGAGCGATTTG
TCGCTGGAGAACGTCAAGACGTCCGTTGTATCCCGCGACGGTGAAAAGATTAATGTACGAGTGCAGTTGCCTGGAAAGGC
GACGCAAAAGGTGTTTGATGAGGCTCTGACGTTCTTGGCCCGTGATGCGCCACCGGTTCCTGGTTTTAGAAAGTCCAAAG
GAGGGAAAACATCAAATATACCCAGCAGCATCCTGCTGCAGATGCTTGGCAAGAGCCGGGTCACCAAATTCGTTCTTCAG
GAAATACTGAGCATCACCATTGAAGAATTTGTCAAGAAGGAAAACCTGAAGGTGAAACCTGAGATCCAGACAACCCAGTC
CGAAGGCGAGATGGAGTCCGCGTTCGCGCCGGGATCAGCATTTGGGTTCAATGTTGTCCTTCAGCTCGAGACACCTGACT
CTGATGATCCAGAGGAGAAACCTGGCTCTGATGACGATTTACAGGAGGAATCTGGTTCCTCGGAGTAG