
Microexon ID | Vv_5:23721232-23721245:- |
Species | Vistis vinifera | Coordinates | 5:23721232..23721245 |
Microexon Cluster ID | MEP37 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Trigger_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAAAACACCCGAT |
Microexon Amino Acid seq | GKTPD |
Microexon-tag DNA Seq | GTAGCTGATGCTCAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACACCCGATATACCCAGAGACATCCTTTTAGAAGTCCTTGGTCCTTCTAAAGTTTAT |
Microexon-tag Amino Acid Seq | VADAQPIPGFRRVKGGKTPDIPRDILLEVLGPSKVY |
Microexon-tag spanning region | 23720585-23722378 |
Microexon-tag prediction score | 0.9513 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | VIT_05s0094g00410.t01x |
Reference Transcript ID | VIT_05s0094g00410.t01 |
Gene ID | VIT_05s0094g00410 |
Gene Name | NA |
Transcript ID | VIT_05s0094g00410.t01 |
Protein ID | VIT_05s0094g00410.t01 |
Gene ID | VIT_05s0094g00410 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 2.4e-10 |
Motif start | 80 |
Motif end | 202 |
Protein seq | >VIT_05s0094g00410.t01 MEIAVNPLSWGLNPKMIHHKQTVLPNFFSIRPCCSLQMKYNTQAFRVRAIHKYCPAVCAVSSGVKDPGVSSSQFEDFSVT ATSTGNAKELKISVELSGVKTRTIFDNVFSKMVADAQPIPGFRRVKGGKTPDIPRDILLEVLGPSKVYMQVIKKVINSTV AEYVEKEGIKVSKDLRVEQSFEDLEDAFEPGEEFRFDAVVQLQEMV* |
CDS seq | >VIT_05s0094g00410.t01 ATGGAAATAGCGGTTAACCCCCTCTCATGGGGGTTGAATCCTAAGATGATTCACCACAAGCAAACAGTTCTTCCAAATTT TTTTTCTATCAGACCATGTTGTTCACTCCAGATGAAATACAATACCCAAGCCTTTCGCGTAAGAGCAATCCATAAATATT GTCCTGCTGTTTGTGCCGTGTCATCAGGTGTCAAAGATCCTGGAGTTTCTTCTTCTCAATTTGAAGACTTTTCAGTTACT GCTACTAGTACTGGCAATGCTAAAGAACTGAAGATTAGCGTGGAGTTATCTGGTGTCAAGACTCGAACAATTTTTGACAA TGTGTTTTCTAAAATGGTAGCTGATGCTCAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACACCCGATATAC CCAGAGACATCCTTTTAGAAGTCCTTGGTCCTTCTAAAGTTTATATGCAGGTTATCAAAAAAGTAATCAACTCCACTGTT GCTGAATATGTAGAAAAGGAAGGTATAAAGGTAAGCAAAGACCTGAGGGTTGAGCAGAGCTTCGAAGATCTTGAGGACGC ATTTGAACCGGGCGAAGAATTCAGATTTGATGCAGTTGTTCAGCTTCAAGAAATGGTTTGA |
Microexon DNA seq | GAAAAACACCCGAT |
Microexon Amino Acid seq | GKTPD |
Microexon-tag DNA Seq | GTAGCTGATGCTCAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACACCCGATATACCCAGAGACATCCTTTTAGAAGTCCTTGGTCCTTCTAAAGTTTAT |
Microexon-tag Amino Acid seq | VADAQPIPGFRRVKGGKTPDIPRDILLEVLGPSKVY |
Transcript ID | Vv.26114.1 |
Gene ID | Vv.26114 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 2.8e-10 |
Motif start | 80 |
Motif end | 202 |
Protein seq | >Vv.26114.1 MEIAVNPLSWGLNPKMIHHKQTVLPNFFSIRPCCSLQMKYNTQAFRVRAIHKYCPAVCAVSSGVKDPGVSSSQFEDFSVT ATSTGNAKELKISVELSGVKTRTIFDNVFSKMVADAQPIPGFRRVKGGKTPDIPRDILLEVLGPSKVYMQVIKKVINSTV AEYVEKEGIKVSKDLRVEQSFEDLEDAFEPGEEFRFDAVVQLQEMD* |
CDS seq | >Vv.26114.1 ATGGAAATAGCGGTTAACCCCCTCTCATGGGGGTTGAATCCTAAGATGATTCACCACAAGCAAACAGTTCTTCCAAATTT TTTTTCTATCAGACCATGTTGTTCACTCCAGATGAAATACAATACCCAAGCCTTTCGCGTAAGAGCAATCCATAAATATT GTCCTGCTGTTTGTGCCGTGTCATCAGGTGTCAAAGATCCTGGAGTTTCTTCTTCTCAATTTGAAGACTTTTCAGTTACT GCTACTAGTACTGGCAATGCTAAAGAACTGAAGATTAGCGTGGAGTTATCTGGTGTCAAGACTCGAACAATTTTTGACAA TGTGTTTTCTAAAATGGTAGCTGATGCTCAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACACCCGATATAC CCAGAGACATCCTTTTAGAAGTCCTTGGTCCTTCTAAAGTTTATATGCAGGTTATCAAAAAAGTAATCAACTCCACTGTT GCTGAATATGTAGAAAAGGAAGGTATAAAGGTAAGCAAAGACCTGAGGGTTGAGCAGAGCTTCGAAGATCTTGAGGACGC ATTTGAACCGGGCGAAGAATTCAGATTTGATGCAGTTGTTCAGCTTCAAGAAATGGATTAA |