Microexon ID Vv_5:23721232-23721245:-
Species Vistis vinifera
Coordinates 5:23721232..23721245
Microexon Cluster ID MEP37
Size 14
Phase 1
Pfam Domain Motif Trigger_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAAAAACACCCGAT
Microexon Amino Acid seq GKTPD
Microexon-tag DNA Seq GTAGCTGATGCTCAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACACCCGATATACCCAGAGACATCCTTTTAGAAGTCCTTGGTCCTTCTAAAGTTTAT
Microexon-tag Amino Acid Seq VADAQPIPGFRRVKGGKTPDIPRDILLEVLGPSKVY
Microexon-tag spanning region23720585-23722378
Microexon-tag prediction score0.9513
Overlapped with the annotated transcript (%) 100
New Transcript ID VIT_05s0094g00410.t01x
Reference Transcript ID VIT_05s0094g00410.t01
Gene ID VIT_05s0094g00410
Gene Name NA
Transcript ID VIT_05s0094g00410.t01
Protein ID VIT_05s0094g00410.t01
Gene ID VIT_05s0094g00410
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 2.4e-10
Motif start 80
Motif end 202
Protein seq >VIT_05s0094g00410.t01
MEIAVNPLSWGLNPKMIHHKQTVLPNFFSIRPCCSLQMKYNTQAFRVRAIHKYCPAVCAVSSGVKDPGVSSSQFEDFSVT
ATSTGNAKELKISVELSGVKTRTIFDNVFSKMVADAQPIPGFRRVKGGKTPDIPRDILLEVLGPSKVYMQVIKKVINSTV
AEYVEKEGIKVSKDLRVEQSFEDLEDAFEPGEEFRFDAVVQLQEMV*
CDS seq >VIT_05s0094g00410.t01
ATGGAAATAGCGGTTAACCCCCTCTCATGGGGGTTGAATCCTAAGATGATTCACCACAAGCAAACAGTTCTTCCAAATTT
TTTTTCTATCAGACCATGTTGTTCACTCCAGATGAAATACAATACCCAAGCCTTTCGCGTAAGAGCAATCCATAAATATT
GTCCTGCTGTTTGTGCCGTGTCATCAGGTGTCAAAGATCCTGGAGTTTCTTCTTCTCAATTTGAAGACTTTTCAGTTACT
GCTACTAGTACTGGCAATGCTAAAGAACTGAAGATTAGCGTGGAGTTATCTGGTGTCAAGACTCGAACAATTTTTGACAA
TGTGTTTTCTAAAATGGTAGCTGATGCTCAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACACCCGATATAC
CCAGAGACATCCTTTTAGAAGTCCTTGGTCCTTCTAAAGTTTATATGCAGGTTATCAAAAAAGTAATCAACTCCACTGTT
GCTGAATATGTAGAAAAGGAAGGTATAAAGGTAAGCAAAGACCTGAGGGTTGAGCAGAGCTTCGAAGATCTTGAGGACGC
ATTTGAACCGGGCGAAGAATTCAGATTTGATGCAGTTGTTCAGCTTCAAGAAATGGTTTGA
Microexon DNA seq GAAAAACACCCGAT
Microexon Amino Acid seq GKTPD
Microexon-tag DNA Seq GTAGCTGATGCTCAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACACCCGATATACCCAGAGACATCCTTTTAGAAGTCCTTGGTCCTTCTAAAGTTTAT
Microexon-tag Amino Acid seq VADAQPIPGFRRVKGGKTPDIPRDILLEVLGPSKVY
Transcript ID Vv.26114.1
Gene ID Vv.26114
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 2.8e-10
Motif start 80
Motif end 202
Protein seq >Vv.26114.1
MEIAVNPLSWGLNPKMIHHKQTVLPNFFSIRPCCSLQMKYNTQAFRVRAIHKYCPAVCAVSSGVKDPGVSSSQFEDFSVT
ATSTGNAKELKISVELSGVKTRTIFDNVFSKMVADAQPIPGFRRVKGGKTPDIPRDILLEVLGPSKVYMQVIKKVINSTV
AEYVEKEGIKVSKDLRVEQSFEDLEDAFEPGEEFRFDAVVQLQEMD*
CDS seq >Vv.26114.1
ATGGAAATAGCGGTTAACCCCCTCTCATGGGGGTTGAATCCTAAGATGATTCACCACAAGCAAACAGTTCTTCCAAATTT
TTTTTCTATCAGACCATGTTGTTCACTCCAGATGAAATACAATACCCAAGCCTTTCGCGTAAGAGCAATCCATAAATATT
GTCCTGCTGTTTGTGCCGTGTCATCAGGTGTCAAAGATCCTGGAGTTTCTTCTTCTCAATTTGAAGACTTTTCAGTTACT
GCTACTAGTACTGGCAATGCTAAAGAACTGAAGATTAGCGTGGAGTTATCTGGTGTCAAGACTCGAACAATTTTTGACAA
TGTGTTTTCTAAAATGGTAGCTGATGCTCAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACACCCGATATAC
CCAGAGACATCCTTTTAGAAGTCCTTGGTCCTTCTAAAGTTTATATGCAGGTTATCAAAAAAGTAATCAACTCCACTGTT
GCTGAATATGTAGAAAAGGAAGGTATAAAGGTAAGCAAAGACCTGAGGGTTGAGCAGAGCTTCGAAGATCTTGAGGACGC
ATTTGAACCGGGCGAAGAATTCAGATTTGATGCAGTTGTTCAGCTTCAAGAAATGGATTAA