Microexon ID Ta_5D:403938314-403938327:-
Species Triticum   Aestivum
Coordinates 5D:403938314..403938327
Microexon Cluster ID MEP37
Size 14
Phase 1
Pfam Domain Motif Trigger_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGAAAACTCCAAAT
Microexon Amino Acid seq GKTPN
Microexon-tag DNA Seq ATTGCCGCGGCACAACCACTTCCAGGATTTCGGCGATTGAAAGGAGGGAAAACTCCAAATGTACCAAAAGAAGTCGCTCTGCACTTGATTGGACCATCAAAAGTGAAG
Microexon-tag Amino Acid Seq IAAAQPLPGFRRLKGGKTPNVPKEVALHLIGPSKVK
Microexon-tag spanning region403938161-403938764
Microexon-tag prediction score0.9574
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS5D02G307200.1x
Reference Transcript ID TraesCS5D02G307200.1
Gene ID TraesCS5D02G307200
Gene Name NA
Transcript ID TraesCS5D02G307200.1
Protein ID
Gene ID TraesCS5D02G307200
Gene Name
Pfam domain motif Trigger_N
Motif E-value 1.60E-08
Motif start 70
Motif end 190
Protein seq >TraesCS5D02G307200.1
MVNHKCTRGLGPQLQFSHDVPSSACLMIFNKECSKRINHKVCRALQAVSPLQCAENPMQAPVAFKDFHVSVLTEEDGVIE
IRVTVSSKMTGSVFEKVLSKHIAAAQPLPGFRRLKGGKTPNVPKEVALHLIGPSKVKKAAIKKIINRAVAEYVEKENLDA
SKNLKVLQSYEELEATFEPGKEFCFDTAVHLTGS*
CDS seq >TraesCS5D02G307200.1
ATGGTGAATCACAAATGCACCAGGGGGCTTGGACCTCAACTTCAGTTTTCGCATGATGTACCATCTTCTGCTTGTCTGAT
GATATTTAACAAAGAATGTTCAAAACGAATCAACCACAAAGTTTGCAGAGCGCTTCAGGCAGTATCTCCACTACAATGTG
CAGAAAATCCCATGCAAGCACCAGTAGCCTTTAAAGATTTTCACGTTTCTGTGCTTACTGAAGAAGATGGAGTGATAGAG
ATACGAGTAACTGTTAGCAGTAAAATGACAGGTTCTGTCTTTGAGAAAGTCTTATCAAAGCATATTGCCGCGGCACAACC
ACTTCCAGGATTTCGGCGATTGAAAGGAGGGAAAACTCCAAATGTACCAAAAGAAGTCGCTCTGCACTTGATTGGACCAT
CAAAAGTGAAGAAAGCAGCCATCAAGAAAATCATCAATCGCGCAGTAGCTGAATATGTTGAAAAGGAGAACCTTGACGCG
TCGAAGAACCTGAAGGTTCTGCAAAGCTACGAGGAGCTCGAGGCCACGTTCGAACCTGGAAAAGAGTTCTGCTTCGACAC
GGCTGTCCATCTAACAGGAAGCTGA
Ta_5D:403938314-403938327:- does not have available information here.