
Microexon ID | Ta_5D:403938314-403938327:- |
Species | Triticum Aestivum | Coordinates | 5D:403938314..403938327 |
Microexon Cluster ID | MEP37 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Trigger_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGAAAACTCCAAAT |
Microexon Amino Acid seq | GKTPN |
Microexon-tag DNA Seq | ATTGCCGCGGCACAACCACTTCCAGGATTTCGGCGATTGAAAGGAGGGAAAACTCCAAATGTACCAAAAGAAGTCGCTCTGCACTTGATTGGACCATCAAAAGTGAAG |
Microexon-tag Amino Acid Seq | IAAAQPLPGFRRLKGGKTPNVPKEVALHLIGPSKVK |
Microexon-tag spanning region | 403938161-403938764 |
Microexon-tag prediction score | 0.9574 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5D02G307200.1x |
Reference Transcript ID | TraesCS5D02G307200.1 |
Gene ID | TraesCS5D02G307200 |
Gene Name | NA |
Transcript ID | TraesCS5D02G307200.1 |
Protein ID | |
Gene ID | TraesCS5D02G307200 |
Gene Name | |
Pfam domain motif | Trigger_N |
Motif E-value | 1.60E-08 |
Motif start | 70 |
Motif end | 190 |
Protein seq | >TraesCS5D02G307200.1 MVNHKCTRGLGPQLQFSHDVPSSACLMIFNKECSKRINHKVCRALQAVSPLQCAENPMQAPVAFKDFHVSVLTEEDGVIE IRVTVSSKMTGSVFEKVLSKHIAAAQPLPGFRRLKGGKTPNVPKEVALHLIGPSKVKKAAIKKIINRAVAEYVEKENLDA SKNLKVLQSYEELEATFEPGKEFCFDTAVHLTGS* |
CDS seq | >TraesCS5D02G307200.1 ATGGTGAATCACAAATGCACCAGGGGGCTTGGACCTCAACTTCAGTTTTCGCATGATGTACCATCTTCTGCTTGTCTGAT GATATTTAACAAAGAATGTTCAAAACGAATCAACCACAAAGTTTGCAGAGCGCTTCAGGCAGTATCTCCACTACAATGTG CAGAAAATCCCATGCAAGCACCAGTAGCCTTTAAAGATTTTCACGTTTCTGTGCTTACTGAAGAAGATGGAGTGATAGAG ATACGAGTAACTGTTAGCAGTAAAATGACAGGTTCTGTCTTTGAGAAAGTCTTATCAAAGCATATTGCCGCGGCACAACC ACTTCCAGGATTTCGGCGATTGAAAGGAGGGAAAACTCCAAATGTACCAAAAGAAGTCGCTCTGCACTTGATTGGACCAT CAAAAGTGAAGAAAGCAGCCATCAAGAAAATCATCAATCGCGCAGTAGCTGAATATGTTGAAAAGGAGAACCTTGACGCG TCGAAGAACCTGAAGGTTCTGCAAAGCTACGAGGAGCTCGAGGCCACGTTCGAACCTGGAAAAGAGTTCTGCTTCGACAC GGCTGTCCATCTAACAGGAAGCTGA |
Ta_5D:403938314-403938327:- does not have available information here.