Microexon ID Ta_5B:484735131-484735144:+
Species Triticum   Aestivum
Coordinates 5B:484735131..484735144
Microexon Cluster ID MEP37
Size 14
Phase 1
Pfam Domain Motif Trigger_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGAAAACTCCAAAT
Microexon Amino Acid seq GKTPN
Microexon-tag DNA Seq ATTGCCGCGGCACAACCACTTCCAGGATTTCGGCGACTGAAAGGAGGGAAAACTCCAAATGTACCAAAAGAAGTCGCTCTGCACTTGATTGGACCGTCAAAAGTGAAG
Microexon-tag Amino Acid Seq IAAAQPLPGFRRLKGGKTPNVPKEVALHLIGPSKVK
Microexon-tag spanning region484734712-484735297
Microexon-tag prediction score0.9541
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS5B02G300100.1x
Reference Transcript ID TraesCS5B02G300100.1
Gene ID TraesCS5B02G300100
Gene Name NA
Transcript ID TraesCS5B02G300100.1
Protein ID
Gene ID TraesCS5B02G300100
Gene Name
Pfam domain motif Trigger_N
Motif E-value 1.90E-09
Motif start 96
Motif end 213
Protein seq >TraesCS5B02G300100.1
MELSISMGGSAVATGLVNLKMVNHKCTRGLGRQLQFSHDVPSSVCLMIFNKEFSKRINHKVCGALQAVSPVQCTENPTQA
PVAFKDFHVSVLTEEDGVIETQIRVTISSKMTDSVFEKVLSKHIAAAQPLPGFRRLKGGKTPNVPKEVALHLIGPSKVKK
AAIKKIINRAVAEYVEKENLDAAKNLKVLQSYEELEATFEPGKEFCFDAAVHLTGS*
CDS seq >TraesCS5B02G300100.1
ATGGAGTTATCCATTTCCATGGGAGGCTCTGCTGTGGCAACGGGCCTCGTGAATCTCAAGATGGTGAATCACAAATGCAC
CAGGGGCCTTGGACGTCAACTTCAGTTTTCACATGATGTACCATCTTCTGTGTGCCTGATGATATTTAACAAAGAATTCT
CAAAACGAATCAACCACAAAGTTTGCGGAGCGCTTCAGGCAGTATCTCCAGTACAATGTACAGAAAATCCCACGCAAGCG
CCGGTAGCCTTTAAAGATTTTCATGTGTCTGTGCTTACTGAAGAAGATGGAGTGATAGAGACACAGATACGAGTAACTAT
TAGCAGTAAAATGACGGATTCTGTCTTTGAGAAAGTCTTATCAAAGCATATTGCCGCGGCACAACCACTTCCAGGATTTC
GGCGACTGAAAGGAGGGAAAACTCCAAATGTACCAAAAGAAGTCGCTCTGCACTTGATTGGACCGTCAAAAGTGAAGAAA
GCAGCCATCAAGAAAATCATCAACCGCGCAGTCGCTGAATATGTTGAAAAGGAGAACCTTGACGCGGCAAAGAACCTGAA
GGTTCTGCAAAGCTACGAGGAGCTCGAGGCCACGTTCGAACCTGGAAAAGAGTTCTGCTTCGACGCGGCTGTCCATCTAA
CAGGAAGCTGA
Ta_5B:484735131-484735144:+ does not have available information here.