
Microexon ID | Ta_5B:484735131-484735144:+ |
Species | Triticum Aestivum | Coordinates | 5B:484735131..484735144 |
Microexon Cluster ID | MEP37 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Trigger_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGAAAACTCCAAAT |
Microexon Amino Acid seq | GKTPN |
Microexon-tag DNA Seq | ATTGCCGCGGCACAACCACTTCCAGGATTTCGGCGACTGAAAGGAGGGAAAACTCCAAATGTACCAAAAGAAGTCGCTCTGCACTTGATTGGACCGTCAAAAGTGAAG |
Microexon-tag Amino Acid Seq | IAAAQPLPGFRRLKGGKTPNVPKEVALHLIGPSKVK |
Microexon-tag spanning region | 484734712-484735297 |
Microexon-tag prediction score | 0.9541 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5B02G300100.1x |
Reference Transcript ID | TraesCS5B02G300100.1 |
Gene ID | TraesCS5B02G300100 |
Gene Name | NA |
Transcript ID | TraesCS5B02G300100.1 |
Protein ID | |
Gene ID | TraesCS5B02G300100 |
Gene Name | |
Pfam domain motif | Trigger_N |
Motif E-value | 1.90E-09 |
Motif start | 96 |
Motif end | 213 |
Protein seq | >TraesCS5B02G300100.1 MELSISMGGSAVATGLVNLKMVNHKCTRGLGRQLQFSHDVPSSVCLMIFNKEFSKRINHKVCGALQAVSPVQCTENPTQA PVAFKDFHVSVLTEEDGVIETQIRVTISSKMTDSVFEKVLSKHIAAAQPLPGFRRLKGGKTPNVPKEVALHLIGPSKVKK AAIKKIINRAVAEYVEKENLDAAKNLKVLQSYEELEATFEPGKEFCFDAAVHLTGS* |
CDS seq | >TraesCS5B02G300100.1 ATGGAGTTATCCATTTCCATGGGAGGCTCTGCTGTGGCAACGGGCCTCGTGAATCTCAAGATGGTGAATCACAAATGCAC CAGGGGCCTTGGACGTCAACTTCAGTTTTCACATGATGTACCATCTTCTGTGTGCCTGATGATATTTAACAAAGAATTCT CAAAACGAATCAACCACAAAGTTTGCGGAGCGCTTCAGGCAGTATCTCCAGTACAATGTACAGAAAATCCCACGCAAGCG CCGGTAGCCTTTAAAGATTTTCATGTGTCTGTGCTTACTGAAGAAGATGGAGTGATAGAGACACAGATACGAGTAACTAT TAGCAGTAAAATGACGGATTCTGTCTTTGAGAAAGTCTTATCAAAGCATATTGCCGCGGCACAACCACTTCCAGGATTTC GGCGACTGAAAGGAGGGAAAACTCCAAATGTACCAAAAGAAGTCGCTCTGCACTTGATTGGACCGTCAAAAGTGAAGAAA GCAGCCATCAAGAAAATCATCAACCGCGCAGTCGCTGAATATGTTGAAAAGGAGAACCTTGACGCGGCAAAGAACCTGAA GGTTCTGCAAAGCTACGAGGAGCTCGAGGCCACGTTCGAACCTGGAAAAGAGTTCTGCTTCGACGCGGCTGTCCATCTAA CAGGAAGCTGA |
Ta_5B:484735131-484735144:+ does not have available information here.