Microexon ID Ta_5A:510279180-510279193:-
Species Triticum   Aestivum
Coordinates 5A:510279180..510279193
Microexon Cluster ID MEP37
Size 14
Phase 1
Pfam Domain Motif Trigger_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGAAAACTCCAAAT
Microexon Amino Acid seq GKTPN
Microexon-tag DNA Seq ATTGCCGCGGCACAACCACTTCCAGGATTTCGGCGATTGAAAGGAGGGAAAACTCCAAATGTACCAAAAGAAGTCGCTCTGCACTTGATTGGACCATCAAAAGTGAAG
Microexon-tag Amino Acid Seq IAAAQPLPGFRRLKGGKTPNVPKEVALHLIGPSKVK
Microexon-tag spanning region510279027-510279630
Microexon-tag prediction score0.9574
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS5A02G301200.1x
Reference Transcript ID TraesCS5A02G301200.1
Gene ID TraesCS5A02G301200
Gene Name NA
Transcript ID TraesCS5A02G301200.1
Protein ID
Gene ID TraesCS5A02G301200
Gene Name
Pfam domain motif Trigger_N
Motif E-value 1.50E-09
Motif start 13
Motif end 134
Protein seq >TraesCS5A02G301200.1
MQAPVAFKDFHVSVLTEEDGVIEIRVTVSSKMTVSVFEKVLSKHIAAAQPLPGFRRLKGGKTPNVPKEVALHLIGPSKVK
KAAIKKIINRAVAEYVEKENLDASKNLKVLQSYEELEATFEPGKEFCFDAAVHLTGS*
CDS seq >TraesCS5A02G301200.1
ATGCAAGCACCGGTAGCCTTTAAAGATTTTCATGTTTCTGTGCTTACCGAAGAAGATGGAGTGATAGAGATACGAGTAAC
TGTTAGCAGTAAAATGACGGTTTCTGTCTTTGAGAAAGTCTTATCAAAGCATATTGCCGCGGCACAACCACTTCCAGGAT
TTCGGCGATTGAAAGGAGGGAAAACTCCAAATGTACCAAAAGAAGTCGCTCTGCACTTGATTGGACCATCAAAAGTGAAG
AAAGCAGCCATCAAGAAAATCATCAATCGCGCAGTCGCTGAATATGTTGAAAAGGAGAACCTTGACGCGTCGAAGAACCT
GAAGGTTCTGCAAAGCTACGAGGAGCTCGAGGCCACGTTCGAACCTGGAAAAGAGTTCTGCTTTGACGCGGCTGTCCATC
TAACAGGAAGCTGA
Ta_5A:510279180-510279193:- does not have available information here.