Microexon ID Ta_3D:508586154-508586167:+
Species Triticum   Aestivum
Coordinates 3D:508586154..508586167
Microexon Cluster ID MEP37
Size 14
Phase 1
Pfam Domain Motif Trigger_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGAAAACATCAAAT
Microexon Amino Acid seq GKTSN
Microexon-tag DNA Seq GCCAAGGACGCGCCGCCGGTACCAGGTTTCAGAAGGTCCAAGGGAGGGAAAACATCAAATATACCAAGCAGCATTCTCCTGTCGATGCTCGGCAAGAGCCGGGTCACC
Microexon-tag Amino Acid Seq AKDAPPVPGFRRSKGGKTSNIPSSILLSMLGKSRVT
Microexon-tag spanning region508585983-508586676
Microexon-tag prediction score0.9133
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS3D02G393700.2x
Reference Transcript ID TraesCS3D02G393700.2
Gene ID TraesCS3D02G393700
Gene Name NA
Transcript ID TraesCS3D02G393700.2
Protein ID
Gene ID TraesCS3D02G393700
Gene Name
Pfam domain motif Trigger_N
Motif E-value 3.10E-11
Motif start 87
Motif end 218
Protein seq >TraesCS3D02G393700.2
MASAATFPKLQLGPRCLGFSQLQATDPVHIHMKIGDACKCPMPAQGLLVSTGRSARHTFLPVSAARSGRAASVAEAEKTG
LSLDSFKTTVVKRDEEKIHLRIELPGKETQKVFDAALTSLAKDAPPVPGFRRSKGGKTSNIPSSILLSMLGKSRVTKFIL
QEILSVTVGDFVKKENLKVNPEIATTQSEGDLESSFAPGSSFGFNVILELEKEPDTDDAIDVELSDSMDAPDVLQSDSEE
PSEEEPASSS*
CDS seq >TraesCS3D02G393700.2
ATGGCTTCAGCCGCGACGTTTCCGAAGCTCCAGCTTGGTCCGCGATGCCTCGGCTTCTCCCAGCTTCAGGCGACCGACCC
GGTTCATATCCACATGAAGATTGGTGATGCCTGCAAGTGCCCCATGCCTGCCCAAGGGTTGCTTGTTTCGACCGGGAGAA
GTGCGAGGCACACATTCCTGCCGGTGTCGGCGGCTCGATCAGGTCGGGCCGCATCGGTCGCCGAGGCCGAGAAGACCGGG
CTCTCGCTGGATAGCTTCAAGACAACCGTTGTCAAACGTGACGAAGAAAAGATCCATTTAAGAATCGAGCTGCCCGGGAA
GGAAACGCAGAAGGTGTTTGATGCAGCCCTGACGAGCCTGGCCAAGGACGCGCCGCCGGTACCAGGTTTCAGAAGGTCCA
AGGGAGGGAAAACATCAAATATACCAAGCAGCATTCTCCTGTCGATGCTCGGCAAGAGCCGGGTCACCAAGTTCATCCTT
CAAGAAATACTCAGCGTCACCGTCGGCGATTTCGTCAAGAAGGAGAACCTCAAGGTGAACCCTGAGATCGCGACGACGCA
ATCGGAAGGCGACCTGGAGTCGTCGTTCGCGCCGGGCTCGTCGTTCGGGTTCAATGTGATCCTGGAGCTGGAGAAGGAGC
CTGACACCGATGACGCCATTGATGTGGAGCTGTCCGACTCCATGGACGCTCCTGACGTGTTGCAGTCCGACTCTGAAGAG
CCTTCTGAAGAGGAGCCTGCCTCCTCCTCCTGA
Ta_3D:508586154-508586167:+ does not have available information here.