
Microexon ID | Ta_3D:508586154-508586167:+ |
Species | Triticum Aestivum | Coordinates | 3D:508586154..508586167 |
Microexon Cluster ID | MEP37 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Trigger_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGAAAACATCAAAT |
Microexon Amino Acid seq | GKTSN |
Microexon-tag DNA Seq | GCCAAGGACGCGCCGCCGGTACCAGGTTTCAGAAGGTCCAAGGGAGGGAAAACATCAAATATACCAAGCAGCATTCTCCTGTCGATGCTCGGCAAGAGCCGGGTCACC |
Microexon-tag Amino Acid Seq | AKDAPPVPGFRRSKGGKTSNIPSSILLSMLGKSRVT |
Microexon-tag spanning region | 508585983-508586676 |
Microexon-tag prediction score | 0.9133 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS3D02G393700.2x |
Reference Transcript ID | TraesCS3D02G393700.2 |
Gene ID | TraesCS3D02G393700 |
Gene Name | NA |
Transcript ID | TraesCS3D02G393700.2 |
Protein ID | |
Gene ID | TraesCS3D02G393700 |
Gene Name | |
Pfam domain motif | Trigger_N |
Motif E-value | 3.10E-11 |
Motif start | 87 |
Motif end | 218 |
Protein seq | >TraesCS3D02G393700.2 MASAATFPKLQLGPRCLGFSQLQATDPVHIHMKIGDACKCPMPAQGLLVSTGRSARHTFLPVSAARSGRAASVAEAEKTG LSLDSFKTTVVKRDEEKIHLRIELPGKETQKVFDAALTSLAKDAPPVPGFRRSKGGKTSNIPSSILLSMLGKSRVTKFIL QEILSVTVGDFVKKENLKVNPEIATTQSEGDLESSFAPGSSFGFNVILELEKEPDTDDAIDVELSDSMDAPDVLQSDSEE PSEEEPASSS* |
CDS seq | >TraesCS3D02G393700.2 ATGGCTTCAGCCGCGACGTTTCCGAAGCTCCAGCTTGGTCCGCGATGCCTCGGCTTCTCCCAGCTTCAGGCGACCGACCC GGTTCATATCCACATGAAGATTGGTGATGCCTGCAAGTGCCCCATGCCTGCCCAAGGGTTGCTTGTTTCGACCGGGAGAA GTGCGAGGCACACATTCCTGCCGGTGTCGGCGGCTCGATCAGGTCGGGCCGCATCGGTCGCCGAGGCCGAGAAGACCGGG CTCTCGCTGGATAGCTTCAAGACAACCGTTGTCAAACGTGACGAAGAAAAGATCCATTTAAGAATCGAGCTGCCCGGGAA GGAAACGCAGAAGGTGTTTGATGCAGCCCTGACGAGCCTGGCCAAGGACGCGCCGCCGGTACCAGGTTTCAGAAGGTCCA AGGGAGGGAAAACATCAAATATACCAAGCAGCATTCTCCTGTCGATGCTCGGCAAGAGCCGGGTCACCAAGTTCATCCTT CAAGAAATACTCAGCGTCACCGTCGGCGATTTCGTCAAGAAGGAGAACCTCAAGGTGAACCCTGAGATCGCGACGACGCA ATCGGAAGGCGACCTGGAGTCGTCGTTCGCGCCGGGCTCGTCGTTCGGGTTCAATGTGATCCTGGAGCTGGAGAAGGAGC CTGACACCGATGACGCCATTGATGTGGAGCTGTCCGACTCCATGGACGCTCCTGACGTGTTGCAGTCCGACTCTGAAGAG CCTTCTGAAGAGGAGCCTGCCTCCTCCTCCTGA |
Ta_3D:508586154-508586167:+ does not have available information here.