
Microexon ID | Ta_3B:671749932-671749945:+ |
Species | Triticum Aestivum | Coordinates | 3B:671749932..671749945 |
Microexon Cluster ID | MEP37 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Trigger_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGAAAACATCGAAT |
Microexon Amino Acid seq | GKTSN |
Microexon-tag DNA Seq | GCCAAGGATGCGCCGCCGGTTCCAGGTTTCAGAAGGTCCAAGGGTGGGAAAACATCGAATATACCAAGCAGCATTCTCCTGTCGATGCTCGGCAAGAGCCGGGTCACC |
Microexon-tag Amino Acid Seq | AKDAPPVPGFRRSKGGKTSNIPSSILLSMLGKSRVT |
Microexon-tag spanning region | 671749762-671750449 |
Microexon-tag prediction score | 0.9088 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS3B02G432600.1x |
Reference Transcript ID | TraesCS3B02G432600.1 |
Gene ID | TraesCS3B02G432600 |
Gene Name | NA |
Transcript ID | TraesCS3B02G432600.1 |
Protein ID | |
Gene ID | TraesCS3B02G432600 |
Gene Name | |
Pfam domain motif | Trigger_N |
Motif E-value | 2.80E-11 |
Motif start | 87 |
Motif end | 223 |
Protein seq | >TraesCS3B02G432600.1 MASAATFPKLRLGPRCHGFSQLQAADPVHIHMKIGDACKCPMPAQRLLVSTGRNARHTFLPVSAARSGRGASVAEAEKTG LSLDSFKTTVVKRDDEKIHLRIELPGKETQKVFDAALTSLAKDAPPVPGFRRSKGGKTSNIPSSILLSMLGKSRVTKFIL QEILSVTVGDFVKKENIKVNPEIATTQSEGDLESSFAPGSSFGFNVILELEKEPDTDDAIDVELSDSKDAPDVLQSDSEE PSEEQPASST* |
CDS seq | >TraesCS3B02G432600.1 ATGGCTTCAGCCGCGACCTTTCCGAAGCTCCGGCTCGGTCCACGATGCCACGGCTTCTCCCAGCTTCAGGCGGCTGACCC GGTTCATATCCACATGAAGATTGGTGATGCCTGCAAGTGCCCCATGCCTGCCCAACGGTTGCTTGTTTCTACCGGGAGAA ATGCGAGGCACACATTCCTGCCGGTTTCGGCGGCTCGATCAGGTCGGGGCGCATCGGTCGCCGAGGCCGAGAAGACTGGG CTCTCGCTGGATAGCTTCAAGACAACCGTTGTCAAACGCGACGACGAAAAGATCCATCTAAGAATCGAGCTGCCCGGGAA GGAAACGCAGAAGGTGTTTGATGCAGCCTTGACAAGCCTGGCCAAGGATGCGCCGCCGGTTCCAGGTTTCAGAAGGTCCA AGGGTGGGAAAACATCGAATATACCAAGCAGCATTCTCCTGTCGATGCTCGGCAAGAGCCGGGTCACCAAGTTCATCCTT CAGGAAATACTCAGCGTAACCGTCGGCGATTTCGTCAAGAAGGAAAACATCAAGGTGAACCCTGAAATCGCGACGACACA ATCGGAAGGCGACCTGGAGTCGTCGTTCGCGCCGGGCTCGTCGTTCGGGTTCAATGTGATCCTTGAGCTGGAGAAGGAGC CTGACACCGATGATGCTATTGACGTGGAGCTGTCCGACTCCAAGGACGCTCCGGACGTGTTGCAGTCCGACTCTGAAGAG CCTTCCGAAGAGCAGCCCGCCTCCTCCACCTGA |
Ta_3B:671749932-671749945:+ does not have available information here.