Microexon ID Ta_3A:646583892-646583905:+
Species Triticum   Aestivum
Coordinates 3A:646583892..646583905
Microexon Cluster ID MEP37
Size 14
Phase 1
Pfam Domain Motif Trigger_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGAAAACATCAAAT
Microexon Amino Acid seq GKTSN
Microexon-tag DNA Seq GCCAAGGACGCGCCGCCGGTTCCAGGTTTCAGAAGGTCTAAGGGAGGGAAAACATCAAATATACCAAGCAGCATTCTCCTGTCGATGCTCGGCAAGAGCCGGGTCACC
Microexon-tag Amino Acid Seq AKDAPPVPGFRRSKGGKTSNIPSSILLSMLGKSRVT
Microexon-tag spanning region646583710-646584417
Microexon-tag prediction score0.9201
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS3A02G399600.2x
Reference Transcript ID TraesCS3A02G399600.2
Gene ID TraesCS3A02G399600
Gene Name NA
Transcript ID TraesCS3A02G399600.2
Protein ID
Gene ID TraesCS3A02G399600
Gene Name
Pfam domain motif Trigger_N
Motif E-value 1.30E-11
Motif start 87
Motif end 226
Protein seq >TraesCS3A02G399600.2
MASAATFPKLQLGPRCHGYSHLQAADPVHVHMKIGDSCKCPMPAQGLLVSTGRSARHTFLPVSAARSGRGASVAEAEKTG
LSLDSFKTTVVKRDDEKIHLRIELPGKETQKVFDAALTSLAKDAPPVPGFRRSKGGKTSNIPSSILLSMLGKSRVTKFIL
QEILSVTVGDFVKKENLKVNPEIATTQSEGDLESSFAPGSSFGFNVILELEKEPDTDDAIDIELSDSKDAPDVKQSDSEE
PSEEEPPSST*
CDS seq >TraesCS3A02G399600.2
ATGGCTTCAGCCGCGACCTTTCCGAAGCTCCAGCTTGGTCCGCGATGCCACGGCTACTCCCATCTTCAGGCGGCTGACCC
GGTCCATGTCCACATGAAGATTGGTGATTCTTGCAAGTGCCCCATGCCCGCCCAAGGGTTGCTTGTTTCTACCGGGAGAA
GTGCAAGGCACACATTCCTGCCGGTGTCGGCGGCTCGATCAGGTCGGGGCGCATCGGTCGCCGAGGCCGAGAAGACCGGG
CTCTCGCTGGATAGCTTCAAGACAACCGTTGTCAAACGCGACGACGAAAAGATCCATTTAAGAATCGAGCTGCCCGGGAA
GGAAACGCAGAAGGTGTTTGATGCAGCCCTGACGAGCCTGGCCAAGGACGCGCCGCCGGTTCCAGGTTTCAGAAGGTCTA
AGGGAGGGAAAACATCAAATATACCAAGCAGCATTCTCCTGTCGATGCTCGGCAAGAGCCGGGTCACCAAGTTCATCCTT
CAGGAAATACTCAGTGTCACCGTCGGCGATTTCGTCAAGAAGGAGAACCTCAAGGTGAACCCTGAGATCGCGACGACGCA
GTCAGAAGGCGACCTGGAGTCGTCGTTCGCGCCGGGCTCGTCGTTCGGGTTCAATGTGATCCTCGAGCTGGAGAAGGAGC
CTGACACGGATGACGCCATTGATATCGAGCTATCGGACTCCAAGGACGCCCCTGACGTGAAGCAGTCCGACTCCGAAGAG
CCTTCCGAAGAGGAGCCCCCCTCCTCCACCTGA
Ta_3A:646583892-646583905:+ does not have available information here.