
Microexon ID | Ta_3A:646583892-646583905:+ |
Species | Triticum Aestivum | Coordinates | 3A:646583892..646583905 |
Microexon Cluster ID | MEP37 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Trigger_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGAAAACATCAAAT |
Microexon Amino Acid seq | GKTSN |
Microexon-tag DNA Seq | GCCAAGGACGCGCCGCCGGTTCCAGGTTTCAGAAGGTCTAAGGGAGGGAAAACATCAAATATACCAAGCAGCATTCTCCTGTCGATGCTCGGCAAGAGCCGGGTCACC |
Microexon-tag Amino Acid Seq | AKDAPPVPGFRRSKGGKTSNIPSSILLSMLGKSRVT |
Microexon-tag spanning region | 646583710-646584417 |
Microexon-tag prediction score | 0.9201 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS3A02G399600.2x |
Reference Transcript ID | TraesCS3A02G399600.2 |
Gene ID | TraesCS3A02G399600 |
Gene Name | NA |
Transcript ID | TraesCS3A02G399600.2 |
Protein ID | |
Gene ID | TraesCS3A02G399600 |
Gene Name | |
Pfam domain motif | Trigger_N |
Motif E-value | 1.30E-11 |
Motif start | 87 |
Motif end | 226 |
Protein seq | >TraesCS3A02G399600.2 MASAATFPKLQLGPRCHGYSHLQAADPVHVHMKIGDSCKCPMPAQGLLVSTGRSARHTFLPVSAARSGRGASVAEAEKTG LSLDSFKTTVVKRDDEKIHLRIELPGKETQKVFDAALTSLAKDAPPVPGFRRSKGGKTSNIPSSILLSMLGKSRVTKFIL QEILSVTVGDFVKKENLKVNPEIATTQSEGDLESSFAPGSSFGFNVILELEKEPDTDDAIDIELSDSKDAPDVKQSDSEE PSEEEPPSST* |
CDS seq | >TraesCS3A02G399600.2 ATGGCTTCAGCCGCGACCTTTCCGAAGCTCCAGCTTGGTCCGCGATGCCACGGCTACTCCCATCTTCAGGCGGCTGACCC GGTCCATGTCCACATGAAGATTGGTGATTCTTGCAAGTGCCCCATGCCCGCCCAAGGGTTGCTTGTTTCTACCGGGAGAA GTGCAAGGCACACATTCCTGCCGGTGTCGGCGGCTCGATCAGGTCGGGGCGCATCGGTCGCCGAGGCCGAGAAGACCGGG CTCTCGCTGGATAGCTTCAAGACAACCGTTGTCAAACGCGACGACGAAAAGATCCATTTAAGAATCGAGCTGCCCGGGAA GGAAACGCAGAAGGTGTTTGATGCAGCCCTGACGAGCCTGGCCAAGGACGCGCCGCCGGTTCCAGGTTTCAGAAGGTCTA AGGGAGGGAAAACATCAAATATACCAAGCAGCATTCTCCTGTCGATGCTCGGCAAGAGCCGGGTCACCAAGTTCATCCTT CAGGAAATACTCAGTGTCACCGTCGGCGATTTCGTCAAGAAGGAGAACCTCAAGGTGAACCCTGAGATCGCGACGACGCA GTCAGAAGGCGACCTGGAGTCGTCGTTCGCGCCGGGCTCGTCGTTCGGGTTCAATGTGATCCTCGAGCTGGAGAAGGAGC CTGACACGGATGACGCCATTGATATCGAGCTATCGGACTCCAAGGACGCCCCTGACGTGAAGCAGTCCGACTCCGAAGAG CCTTCCGAAGAGGAGCCCCCCTCCTCCACCTGA |
Ta_3A:646583892-646583905:+ does not have available information here.