Microexon ID Sb_2:64853564-64853577:+
Species Sorghum   Bicolor
Coordinates 2:64853564..64853577
Microexon Cluster ID MEP37
Size 14
Phase 1
Pfam Domain Motif Trigger_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGAAAACTCCAGAT
Microexon Amino Acid seq GKTPD
Microexon-tag DNA Seq GTTGCCGCCGCACAACCCCTTCCTGGCTTTCGACGAATGAAAGGCGGGAAAACTCCAGATATTCCAAAAGAAGTCGCTCTACACTTAATTGGACCATCAAAAGTGAAG
Microexon-tag Amino Acid Seq VAAAQPLPGFRRMKGGKTPDIPKEVALHLIGPSKVK
Microexon-tag spanning region64853228-64853748
Microexon-tag prediction score0.9515
Overlapped with the annotated transcript (%) 100
New Transcript ID EER99178x
Reference Transcript ID EER99178
Gene ID SORBI_3002G264000
Gene Name NA
Transcript ID EER99178
Protein ID
Gene ID SORBI_3002G264000
Gene Name
Pfam domain motif Trigger_N
Motif E-value 2.40E-09
Motif start 94
Motif end 216
Protein seq >EER99178
MELSTPIGSSLARTAAMALVSPNLKVGLQITNQMCVRGMQLQCQFSHRLPSVSCSMLLNTQPSQRTNHKDCGLLQVQCTQ
NLMQSSVSFSDFSVSVCTKEDGLIKLQVNVSGTMTDSIFEKVFTKNVAAAQPLPGFRRMKGGKTPDIPKEVALHLIGPSK
VKKETIKKIINSTVAEYVQKEGLTASKNLKVQQSYEELEAAFEPGKEFCFDATVHLQ*
CDS seq >EER99178
ATGGAGTTATCCACTCCCATCGGGAGCTCCCTTGCTAGAACTGCGGCCATGGCCCTCGTCAGCCCCAACCTCAAGGTTGG
TCTGCAGATAACCAATCAAATGTGTGTGAGGGGGATGCAACTTCAGTGCCAATTTTCTCATAGACTACCATCTGTATCTT
GTTCAATGTTGTTAAACACACAACCTTCACAACGAACCAACCATAAAGATTGTGGTTTGCTTCAGGTGCAATGTACACAA
AACCTGATGCAGTCGTCAGTATCTTTCAGTGACTTCTCTGTTTCAGTGTGTACTAAAGAGGATGGTCTGATAAAGCTACA
GGTAAATGTATCTGGCACAATGACAGATTCTATCTTCGAGAAAGTTTTCACGAAGAATGTTGCCGCCGCACAACCCCTTC
CTGGCTTTCGACGAATGAAAGGCGGGAAAACTCCAGATATTCCAAAAGAAGTCGCTCTACACTTAATTGGACCATCAAAA
GTGAAGAAAGAAACCATCAAGAAAATTATAAATAGCACGGTTGCTGAGTATGTTCAAAAGGAGGGCCTGACTGCATCGAA
GAATCTGAAAGTTCAGCAGAGCTATGAAGAACTTGAAGCAGCATTTGAACCAGGGAAAGAATTTTGCTTTGACGCAACAG
TTCATTTACAATAA
Sb_2:64853564-64853577:+ does not have available information here.