
Microexon ID | Sb_2:64853564-64853577:+ |
Species | Sorghum Bicolor | Coordinates | 2:64853564..64853577 |
Microexon Cluster ID | MEP37 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Trigger_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGAAAACTCCAGAT |
Microexon Amino Acid seq | GKTPD |
Microexon-tag DNA Seq | GTTGCCGCCGCACAACCCCTTCCTGGCTTTCGACGAATGAAAGGCGGGAAAACTCCAGATATTCCAAAAGAAGTCGCTCTACACTTAATTGGACCATCAAAAGTGAAG |
Microexon-tag Amino Acid Seq | VAAAQPLPGFRRMKGGKTPDIPKEVALHLIGPSKVK |
Microexon-tag spanning region | 64853228-64853748 |
Microexon-tag prediction score | 0.9515 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EER99178x |
Reference Transcript ID | EER99178 |
Gene ID | SORBI_3002G264000 |
Gene Name | NA |
Transcript ID | EER99178 |
Protein ID | |
Gene ID | SORBI_3002G264000 |
Gene Name | |
Pfam domain motif | Trigger_N |
Motif E-value | 2.40E-09 |
Motif start | 94 |
Motif end | 216 |
Protein seq | >EER99178 MELSTPIGSSLARTAAMALVSPNLKVGLQITNQMCVRGMQLQCQFSHRLPSVSCSMLLNTQPSQRTNHKDCGLLQVQCTQ NLMQSSVSFSDFSVSVCTKEDGLIKLQVNVSGTMTDSIFEKVFTKNVAAAQPLPGFRRMKGGKTPDIPKEVALHLIGPSK VKKETIKKIINSTVAEYVQKEGLTASKNLKVQQSYEELEAAFEPGKEFCFDATVHLQ* |
CDS seq | >EER99178 ATGGAGTTATCCACTCCCATCGGGAGCTCCCTTGCTAGAACTGCGGCCATGGCCCTCGTCAGCCCCAACCTCAAGGTTGG TCTGCAGATAACCAATCAAATGTGTGTGAGGGGGATGCAACTTCAGTGCCAATTTTCTCATAGACTACCATCTGTATCTT GTTCAATGTTGTTAAACACACAACCTTCACAACGAACCAACCATAAAGATTGTGGTTTGCTTCAGGTGCAATGTACACAA AACCTGATGCAGTCGTCAGTATCTTTCAGTGACTTCTCTGTTTCAGTGTGTACTAAAGAGGATGGTCTGATAAAGCTACA GGTAAATGTATCTGGCACAATGACAGATTCTATCTTCGAGAAAGTTTTCACGAAGAATGTTGCCGCCGCACAACCCCTTC CTGGCTTTCGACGAATGAAAGGCGGGAAAACTCCAGATATTCCAAAAGAAGTCGCTCTACACTTAATTGGACCATCAAAA GTGAAGAAAGAAACCATCAAGAAAATTATAAATAGCACGGTTGCTGAGTATGTTCAAAAGGAGGGCCTGACTGCATCGAA GAATCTGAAAGTTCAGCAGAGCTATGAAGAACTTGAAGCAGCATTTGAACCAGGGAAAGAATTTTGCTTTGACGCAACAG TTCATTTACAATAA |
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