
Microexon ID | Ps_NC_039367.1:62984239-62984252:+ |
Species | Papaver somniferum | Coordinates | NC_039367.1:62984239..62984252 |
Microexon Cluster ID | MEP37 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Trigger_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAAGACATCCAAT |
Microexon Amino Acid seq | GKTSN |
Microexon-tag DNA Seq | GCTAAATCAGCACCACCTGTTCCTGGGTTCCGCAAAATGAAAGGAGGAAAGACATCCAATATTCCAAAGAGCTTTATATTACGGGCTCTTGGTGAAGATCGTGTGACC |
Microexon-tag Amino Acid Seq | AKSAPPVPGFRKMKGGKTSNIPKSFILRALGEDRVT |
Microexon-tag spanning region | 62984055-62984377 |
Microexon-tag prediction score | 0.925 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026566437.1x |
Reference Transcript ID | XM_026566437.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026566437.1 |
Protein ID | XP_026422222.1 |
Gene ID | LOC113318290 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 2.2e-08 |
Motif start | 93 |
Motif end | 233 |
Protein seq | >XP_026422222.1 MACVSMSTVPSKTLSFPSIREVSIGTFNNPGHICGSTKSFSVHYTRNHNFPRLLFSSGESHRRSSQITYAVDSGVESSIT ADQDIVRHLKQAKVVIESRDDDKIQVRVDLTGIETLKIHDVVIANLAKSAPPVPGFRKMKGGKTSNIPKSFILRALGEDR VTKFTVQEIVSATMTEFVKTENLTVNNTFKTIQSAAELKATFKPGKEFGFNATLDIEKENSDQTSSSPSEVEVLPDTVKE NSDQTTSSPSEVEVLPQ* |
CDS seq | >XM_026566437.1 ATGGCGTGTGTATCGATGTCTACAGTTCCTTCAAAAACCCTTTCATTTCCAAGTATTAGAGAGGTTTCTATAGGGACCTT TAACAATCCTGGGCATATATGTGGAAGCACTAAAAGCTTCAGTGTTCACTACACAAGAAATCACAATTTTCCTAGGTTAT TATTCTCAAGCGGCGAAAGTCACAGGCGATCATCCCAGATCACATATGCAGTTGATTCAGGAGTTGAGTCGTCAATTACT GCTGATCAAGACATTGTTCGTCACTTAAAACAAGCAAAGGTAGTCATTGAGTCACGAGATGATGATAAGATCCAAGTTAG AGTGGACTTAACTGGAATAGAAACACTAAAAATACATGATGTGGTTATAGCAAATTTGGCTAAATCAGCACCACCTGTTC CTGGGTTCCGCAAAATGAAAGGAGGAAAGACATCCAATATTCCAAAGAGCTTTATATTACGGGCTCTTGGTGAAGATCGT GTGACCAAGTTCACTGTACAAGAAATTGTCAGTGCAACCATGACCGAATTTGTAAAGACGGAAAATTTAACTGTGAACAA CACATTCAAGACAATACAATCAGCAGCAGAGCTAAAAGCGACTTTTAAACCAGGAAAAGAATTTGGTTTCAATGCTACAC TGGATATTGAAAAAGAAAATAGTGATCAGACCAGTTCAAGCCCCTCGGAGGTTGAAGTTTTGCCTGATACTGTGAAAGAA AACAGTGACCAGACAACATCAAGCCCCTCAGAGGTTGAAGTTTTGCCGCAATGA |
Microexon DNA seq | GAAAGACATCCAAT |
Microexon Amino Acid seq | GKTSN |
Microexon-tag DNA Seq | GCTAAATCAGCACCACCTGTTCCTGGGTTCCGCAAAATGAAAGGAGGAAAGACATCCAATATTCCAAAGAGCTTTATATTACGGGCTCTTGGTGAAGATCGTGTGACC |
Microexon-tag Amino Acid seq | AKSAPPVPGFRKMKGGKTSNIPKSFILRALGEDRVT |
Transcript ID | Ps.61190.1 |
Gene ID | Ps.61190 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 2e-05 |
Motif start | 93 |
Motif end | 181 |
Protein seq | >Ps.61190.1 MACVSMSTVPSKTLSFPSIREVSIGTFNNPGHICGSTKSFSVHYTRNHNFPRLLFSSGESHRRSSQITYAVDSGVESSIT ADQDIVRHLKQAKVVIESRDDDKIQVRVDLTGIETLKIHDVVIANLAKSAPPVPGFRKMKGGKTSNIPKSFILRALGEDR VTKFTVQEIVSATMTEFVKTASYQT* |
CDS seq | >Ps.61190.1 ATGGCGTGTGTATCGATGTCTACAGTTCCTTCAAAAACCCTTTCATTTCCAAGTATTAGAGAGGTTTCTATAGGGACCTT TAACAATCCTGGGCATATATGTGGAAGCACTAAAAGCTTCAGTGTTCACTACACAAGAAATCACAATTTTCCTAGGTTAT TATTCTCAAGCGGCGAAAGTCACAGGCGATCATCCCAGATCACATATGCAGTTGATTCAGGAGTTGAGTCGTCAATTACT GCTGATCAAGACATTGTTCGTCACTTAAAACAAGCAAAGGTAGTCATTGAGTCACGAGATGATGATAAGATCCAAGTTAG AGTGGACTTAACTGGAATAGAAACACTAAAAATACATGATGTGGTTATAGCAAATTTGGCTAAATCAGCACCACCTGTTC CTGGGTTCCGCAAAATGAAAGGAGGAAAGACATCCAATATTCCAAAGAGCTTTATATTACGGGCTCTTGGTGAAGATCGT GTGACCAAGTTCACTGTACAAGAAATTGTCAGTGCAACCATGACCGAATTTGTAAAGACGGCAAGTTATCAAACTTAA |