Microexon ID Ps_NC_039367.1:62977357-62977370:-
Species Papaver somniferum
Coordinates NC_039367.1:62977357..62977370
Microexon Cluster ID MEP37
Size 14
Phase 1
Pfam Domain Motif Trigger_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAAAAACTCCAAAT
Microexon Amino Acid seq GKTPN
Microexon-tag DNA Seq GTTGCTGCCGCACAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACTCCAAATATACCTAAAGATATACTCGTGCAAGTCCTTGGGCCAGAAAAAGTTTAC
Microexon-tag Amino Acid Seq VAAAQPIPGFRRVKGGKTPNIPKDILVQVLGPEKVY
Microexon-tag spanning region62977096-62977595
Microexon-tag prediction score0.9547
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026565714.1x
Reference Transcript ID XM_026565714.1
Gene ID NA
Gene Name NA
Transcript ID XM_026565714.1
Protein ID XP_026421499.1
Gene ID LOC113317561
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 9.1e-11
Motif start 46
Motif end 153
Protein seq >XP_026421499.1
MIQFCCAGSEFVEKSQPCLLQKKKCKQAEEVGVSTTSLDGISVAAKTTSEPLELKIRIDVTGAKTQEIFDDVFSKMVAAA
QPIPGFRRVKGGKTPNIPKDILVQVLGPEKVYKNVIKRVINSSIADYVEKEGLKITKELSVEQNYEELEAKFEPDSDEKH
KDRTYDLEEQTHIDGPLPCTLCGEN*
CDS seq >XM_026565714.1
ATGATACAATTTTGTTGCGCAGGAAGCGAGTTCGTGGAAAAGTCGCAACCATGTTTACTTCAGAAGAAGAAGTGCAAGCA
AGCAGAAGAAGTAGGTGTTTCTACTACTTCATTGGACGGCATCTCAGTTGCTGCTAAAACTACTTCTGAGCCACTAGAGT
TGAAGATACGGATAGATGTTACTGGTGCGAAAACACAAGAAATTTTTGACGACGTTTTTTCCAAAATGGTTGCTGCCGCA
CAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACTCCAAATATACCTAAAGATATACTCGTGCAAGTCCTTGG
GCCAGAAAAAGTTTACAAGAATGTGATCAAGAGAGTAATAAACTCAAGCATTGCTGATTATGTAGAGAAGGAAGGTTTGA
AGATTACCAAGGAGCTTAGTGTTGAGCAGAACTATGAAGAGCTTGAAGCAAAATTTGAACCTGACAGTGACGAGAAGCAT
AAGGATCGCACATACGACCTAGAGGAACAAACTCATATCGACGGGCCTCTACCCTGTACTTTGTGTGGAGAGAACTAA
Microexon DNA seq GAAAAACTCCAAAT
Microexon Amino Acid seq GKTPN
Microexon-tag DNA Seq GTTGCTGCCGCACAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACTCCAAATATACCTAAAGATATACTCGTGCAAGTCCTTGGGCCAGAAAAAGTTTAC
Microexon-tag Amino Acid seq VAAAQPIPGFRRVKGGKTPNIPKDILVQVLGPEKVY
Transcript ID XM_026565716.1
Gene ID Ps.61189
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 9e-11
Motif start 44
Motif end 151
Protein seq >XM_026565716.1
MIQFCCAGSEFVEKSQPCLLQKKKCKQEVGVSTTSLDGISVAAKTTSEPLELKIRIDVTGAKTQEIFDDVFSKMVAAAQP
IPGFRRVKGGKTPNIPKDILVQVLGPEKVYKNVIKRVINSSIADYVEKEGLKITKELSVEQNYEELEAKFEPDSDEKHKD
RTYDLEEQTHIDGPLPCTLCGEN*
CDS seq >XM_026565716.1
ATGATACAATTTTGTTGCGCAGGAAGCGAGTTCGTGGAAAAGTCGCAACCATGTTTACTTCAGAAGAAGAAGTGCAAGCA
AGAAGTAGGTGTTTCTACTACTTCATTGGACGGCATCTCAGTTGCTGCTAAAACTACTTCTGAGCCACTAGAGTTGAAGA
TACGGATAGATGTTACTGGTGCGAAAACACAAGAAATTTTTGACGACGTTTTTTCCAAAATGGTTGCTGCCGCACAGCCC
ATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACTCCAAATATACCTAAAGATATACTCGTGCAAGTCCTTGGGCCAGA
AAAAGTTTACAAGAATGTGATCAAGAGAGTAATAAACTCAAGCATTGCTGATTATGTAGAGAAGGAAGGTTTGAAGATTA
CCAAGGAGCTTAGTGTTGAGCAGAACTATGAAGAGCTTGAAGCAAAATTTGAACCTGACAGTGACGAGAAGCATAAGGAT
CGCACATACGACCTAGAGGAACAAACTCATATCGACGGGCCTCTACCCTGTACTTTGTGTGGAGAGAACTAA