
Microexon ID | Ps_NC_039367.1:62977357-62977370:- |
Species | Papaver somniferum | Coordinates | NC_039367.1:62977357..62977370 |
Microexon Cluster ID | MEP37 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Trigger_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAAAACTCCAAAT |
Microexon Amino Acid seq | GKTPN |
Microexon-tag DNA Seq | GTTGCTGCCGCACAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACTCCAAATATACCTAAAGATATACTCGTGCAAGTCCTTGGGCCAGAAAAAGTTTAC |
Microexon-tag Amino Acid Seq | VAAAQPIPGFRRVKGGKTPNIPKDILVQVLGPEKVY |
Microexon-tag spanning region | 62977096-62977595 |
Microexon-tag prediction score | 0.9547 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026565714.1x |
Reference Transcript ID | XM_026565714.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026565714.1 |
Protein ID | XP_026421499.1 |
Gene ID | LOC113317561 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 9.1e-11 |
Motif start | 46 |
Motif end | 153 |
Protein seq | >XP_026421499.1 MIQFCCAGSEFVEKSQPCLLQKKKCKQAEEVGVSTTSLDGISVAAKTTSEPLELKIRIDVTGAKTQEIFDDVFSKMVAAA QPIPGFRRVKGGKTPNIPKDILVQVLGPEKVYKNVIKRVINSSIADYVEKEGLKITKELSVEQNYEELEAKFEPDSDEKH KDRTYDLEEQTHIDGPLPCTLCGEN* |
CDS seq | >XM_026565714.1 ATGATACAATTTTGTTGCGCAGGAAGCGAGTTCGTGGAAAAGTCGCAACCATGTTTACTTCAGAAGAAGAAGTGCAAGCA AGCAGAAGAAGTAGGTGTTTCTACTACTTCATTGGACGGCATCTCAGTTGCTGCTAAAACTACTTCTGAGCCACTAGAGT TGAAGATACGGATAGATGTTACTGGTGCGAAAACACAAGAAATTTTTGACGACGTTTTTTCCAAAATGGTTGCTGCCGCA CAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACTCCAAATATACCTAAAGATATACTCGTGCAAGTCCTTGG GCCAGAAAAAGTTTACAAGAATGTGATCAAGAGAGTAATAAACTCAAGCATTGCTGATTATGTAGAGAAGGAAGGTTTGA AGATTACCAAGGAGCTTAGTGTTGAGCAGAACTATGAAGAGCTTGAAGCAAAATTTGAACCTGACAGTGACGAGAAGCAT AAGGATCGCACATACGACCTAGAGGAACAAACTCATATCGACGGGCCTCTACCCTGTACTTTGTGTGGAGAGAACTAA |
Microexon DNA seq | GAAAAACTCCAAAT |
Microexon Amino Acid seq | GKTPN |
Microexon-tag DNA Seq | GTTGCTGCCGCACAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACTCCAAATATACCTAAAGATATACTCGTGCAAGTCCTTGGGCCAGAAAAAGTTTAC |
Microexon-tag Amino Acid seq | VAAAQPIPGFRRVKGGKTPNIPKDILVQVLGPEKVY |
Transcript ID | XM_026565716.1 |
Gene ID | Ps.61189 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 9e-11 |
Motif start | 44 |
Motif end | 151 |
Protein seq | >XM_026565716.1 MIQFCCAGSEFVEKSQPCLLQKKKCKQEVGVSTTSLDGISVAAKTTSEPLELKIRIDVTGAKTQEIFDDVFSKMVAAAQP IPGFRRVKGGKTPNIPKDILVQVLGPEKVYKNVIKRVINSSIADYVEKEGLKITKELSVEQNYEELEAKFEPDSDEKHKD RTYDLEEQTHIDGPLPCTLCGEN* |
CDS seq | >XM_026565716.1 ATGATACAATTTTGTTGCGCAGGAAGCGAGTTCGTGGAAAAGTCGCAACCATGTTTACTTCAGAAGAAGAAGTGCAAGCA AGAAGTAGGTGTTTCTACTACTTCATTGGACGGCATCTCAGTTGCTGCTAAAACTACTTCTGAGCCACTAGAGTTGAAGA TACGGATAGATGTTACTGGTGCGAAAACACAAGAAATTTTTGACGACGTTTTTTCCAAAATGGTTGCTGCCGCACAGCCC ATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACTCCAAATATACCTAAAGATATACTCGTGCAAGTCCTTGGGCCAGA AAAAGTTTACAAGAATGTGATCAAGAGAGTAATAAACTCAAGCATTGCTGATTATGTAGAGAAGGAAGGTTTGAAGATTA CCAAGGAGCTTAGTGTTGAGCAGAACTATGAAGAGCTTGAAGCAAAATTTGAACCTGACAGTGACGAGAAGCATAAGGAT CGCACATACGACCTAGAGGAACAAACTCATATCGACGGGCCTCTACCCTGTACTTTGTGTGGAGAGAACTAA |