
Microexon ID | Ps_NC_039359.1:107851178-107851191:+ |
Species | Papaver somniferum | Coordinates | NC_039359.1:107851178..107851191 |
Microexon Cluster ID | MEP37 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Trigger_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAAGACATCCAAT |
Microexon Amino Acid seq | GKTSN |
Microexon-tag DNA Seq | GCTAAATCAGCACCACCTGTTCCTGGGTTCCGCAAAATGAAAGGAGGAAAGACATCCAATATTCCAAAGAGCTTTATATTACGGGCTCTTGGTGAAGATCGTGTGACC |
Microexon-tag Amino Acid Seq | AKSAPPVPGFRKMKGGKTSNIPKSFILRALGEDRVT |
Microexon-tag spanning region | 107850994-107851316 |
Microexon-tag prediction score | 0.925 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026597287.1x |
Reference Transcript ID | XM_026597287.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026597287.1 |
Protein ID | XP_026453072.1 |
Gene ID | LOC113353791 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 7.8e-08 |
Motif start | 93 |
Motif end | 217 |
Protein seq | >XP_026453072.1 MACVSMSTVPSKTLSFPSIREVSIGTFNNPMHICGSTKSFSVHYTRNHNFPRLLFSSRESQSRSSQITYAVDSGVASSTT ADQDIVRHLKQAKVVIESRDDDKIQVRVELTGLETLKIHDVVIANLAKSAPPVPGFRKMKGGKTSNIPKSFILRALGEDR VTKFTIQEIVSATMTEFVKTENLTVNNTFKTIQSAAELKKAFTPGKEFGFNAMLDFEKEKSDQTSSSPSEVEVLPDTEKE NSDQTRSSLSEAEVLPQ* |
CDS seq | >XM_026597287.1 ATGGCGTGTGTATCAATGTCTACAGTTCCTTCAAAAACCCTTTCATTTCCAAGTATTAGAGAGGTTTCTATAGGGACCTT TAACAATCCTATGCATATATGTGGAAGCACTAAAAGCTTCAGTGTCCACTACACAAGAAATCATAATTTTCCTAGGTTAT TATTCTCAAGCCGGGAAAGTCAAAGTCGATCATCCCAGATCACATATGCAGTTGATTCAGGTGTCGCGTCGTCAACTACT GCTGATCAAGACATTGTTCGTCATTTAAAACAAGCAAAGGTAGTCATTGAGTCACGAGATGATGATAAGATCCAAGTTAG AGTGGAGTTAACTGGATTAGAAACACTAAAAATACATGACGTGGTTATAGCAAATCTGGCTAAATCAGCACCACCTGTTC CTGGGTTCCGCAAAATGAAAGGAGGAAAGACATCCAATATTCCAAAGAGCTTTATATTACGGGCTCTTGGTGAAGATCGT GTGACCAAGTTCACTATACAAGAAATTGTCAGTGCGACCATGACCGAATTTGTAAAGACGGAAAATTTGACTGTGAACAA CACGTTCAAGACAATACAATCAGCAGCAGAGCTAAAAAAGGCTTTCACTCCAGGAAAAGAATTTGGTTTCAATGCTATGC TGGATTTTGAAAAAGAAAAAAGTGATCAGACCAGTTCAAGCCCATCAGAGGTTGAAGTTTTGCCTGATACTGAAAAAGAA AATAGTGACCAGACAAGATCAAGCCTCTCAGAGGCTGAAGTTTTGCCGCAATGA |
Microexon DNA seq | GAAAGACATCCAAT |
Microexon Amino Acid seq | GKTSN |
Microexon-tag DNA Seq | GCTAAATCAGCACCACCTGTTCCTGGGTTCCGCAAAATGAAAGGAGGAAAGACATCCAATATTCCAAAGAGCTTTATATTACGGGCTCTTGGTGAAGATCGTGTGACC |
Microexon-tag Amino Acid seq | AKSAPPVPGFRKMKGGKTSNIPKSFILRALGEDRVT |
Transcript ID | XM_026597287.1 |
Gene ID | Ps.11890 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 7.9e-08 |
Motif start | 93 |
Motif end | 217 |
Protein seq | >XM_026597287.1 MACVSMSTVPSKTLSFPSIREVSIGTFNNPMHICGSTKSFSVHYTRNHNFPRLLFSSRESQSRSSQITYAVDSGVASSTT ADQDIVRHLKQAKVVIESRDDDKIQVRVELTGLETLKIHDVVIANLAKSAPPVPGFRKMKGGKTSNIPKSFILRALGEDR VTKFTIQEIVSATMTEFVKTENLTVNNTFKTIQSAAELKKAFTPGKEFGFNAMLDFEKEKSDQTSSSPSEVEVLPDTEKE NSDQTRSSLSEAEVLPQ* |
CDS seq | >XM_026597287.1 ATGGCGTGTGTATCAATGTCTACAGTTCCTTCAAAAACCCTTTCATTTCCAAGTATTAGAGAGGTTTCTATAGGGACCTT TAACAATCCTATGCATATATGTGGAAGCACTAAAAGCTTCAGTGTCCACTACACAAGAAATCATAATTTTCCTAGGTTAT TATTCTCAAGCCGGGAAAGTCAAAGTCGATCATCCCAGATCACATATGCAGTTGATTCAGGTGTCGCGTCGTCAACTACT GCTGATCAAGACATTGTTCGTCATTTAAAACAAGCAAAGGTAGTCATTGAGTCACGAGATGATGATAAGATCCAAGTTAG AGTGGAGTTAACTGGATTAGAAACACTAAAAATACATGACGTGGTTATAGCAAATCTGGCTAAATCAGCACCACCTGTTC CTGGGTTCCGCAAAATGAAAGGAGGAAAGACATCCAATATTCCAAAGAGCTTTATATTACGGGCTCTTGGTGAAGATCGT GTGACCAAGTTCACTATACAAGAAATTGTCAGTGCGACCATGACCGAATTTGTAAAGACGGAAAATTTGACTGTGAACAA CACGTTCAAGACAATACAATCAGCAGCAGAGCTAAAAAAGGCTTTCACTCCAGGAAAAGAATTTGGTTTCAATGCTATGC TGGATTTTGAAAAAGAAAAAAGTGATCAGACCAGTTCAAGCCCATCAGAGGTTGAAGTTTTGCCTGATACTGAAAAAGAA AATAGTGACCAGACAAGATCAAGCCTCTCAGAGGCTGAAGTTTTGCCGCAATGA |