Microexon ID Ps_NC_039359.1:107836730-107836743:-
Species Papaver somniferum
Coordinates NC_039359.1:107836730..107836743
Microexon Cluster ID MEP37
Size 14
Phase 1
Pfam Domain Motif Trigger_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAAAAACTCCAAAT
Microexon Amino Acid seq GKTPN
Microexon-tag DNA Seq GTTGCTGCTGCACAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACTCCAAATATACCTGAAGATATACTCGTGCAAGTCCTTGGGCCAGAAAAAGTTTAC
Microexon-tag Amino Acid Seq VAAAQPIPGFRRVKGGKTPNIPEDILVQVLGPEKVY
Microexon-tag spanning region107836468-107836970
Microexon-tag prediction score0.9503
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026592584.1x
Reference Transcript ID XM_026592584.1
Gene ID NA
Gene Name NA
Transcript ID XM_026592584.1
Protein ID XP_026448369.1
Gene ID LOC113348732
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 3e-11
Motif start 109
Motif end 226
Protein seq >XP_026448369.1
MLFAYQCLEKIRFCKFLCYFLFDKMASLSISTFSPKVLLCGNGKEVSSWKARNHVYFRRSASVSIHYRKQEQSRVNQRSS
LCAFALSSESEEVGISTTSLDGISVAATTTSEPLELKIRIDVTGAKTQEIFDDVFSKMVAAAQPIPGFRRVKGGKTPNIP
EDILVQVLGPEKVYKNVIKRVINSSIAEYVEKEGLKITKELSVEQNYEELEAKFEPGTEFSFDAFIHLQETNKEKC*
CDS seq >XM_026592584.1
ATGCTATTTGCCTATCAATGCCTGGAAAAGATCAGGTTCTGTAAATTTCTCTGTTATTTTCTTTTTGATAAAATGGCGTC
TCTATCAATATCTACATTTTCTCCCAAAGTTCTTCTATGTGGAAACGGCAAAGAAGTGAGTTCGTGGAAAGCTCGCAACC
ATGTTTACTTCAGAAGAAGTGCAAGCGTTAGTATTCACTATCGAAAACAAGAGCAGTCTAGGGTAAATCAAAGATCTTCG
CTTTGTGCATTTGCTTTATCTTCAGAATCGGAAGAAGTAGGTATTTCTACTACTTCATTGGATGGCATCTCAGTTGCTGC
TACCACTACTTCTGAGCCACTAGAGTTGAAGATACGGATAGATGTTACTGGTGCGAAAACACAAGAAATTTTTGACGACG
TTTTTTCCAAAATGGTTGCTGCTGCACAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACTCCAAATATACCT
GAAGATATACTCGTGCAAGTCCTTGGGCCAGAAAAAGTTTACAAGAATGTGATCAAGAGAGTAATAAACTCAAGCATTGC
CGAGTACGTAGAGAAGGAAGGTTTGAAGATTACCAAGGAGCTTAGTGTTGAGCAGAACTATGAAGAGCTTGAAGCAAAAT
TTGAACCTGGTACAGAATTCAGCTTTGATGCATTTATTCATCTTCAAGAAACAAATAAAGAAAAATGTTAA
Microexon DNA seq GAAAAACTCCAAAT
Microexon Amino Acid seq GKTPN
Microexon-tag DNA Seq GTTGCTGCTGCACAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACTCCAAATATACCTGAAGATATACTCGTGCAAGTCCTTGGGCCAGAAAAAGTTTAC
Microexon-tag Amino Acid seq VAAAQPIPGFRRVKGGKTPNIPEDILVQVLGPEKVY
Transcript ID XM_026592585.1
Gene ID Ps.11888
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 1.2e-11
Motif start 44
Motif end 161
Protein seq >XM_026592585.1
MFTSEEVQAVNQRSSLCAFALSSESEEVGISTTSLDGISVAATTTSEPLELKIRIDVTGAKTQEIFDDVFSKMVAAAQPI
PGFRRVKGGKTPNIPEDILVQVLGPEKVYKNVIKRVINSSIAEYVEKEGLKITKELSVEQNYEELEAKFEPGTEFSFDAF
IHLQETNKEKC*
CDS seq >XM_026592585.1
ATGTTTACTTCAGAAGAAGTGCAAGCGGTAAATCAAAGATCTTCGCTTTGTGCATTTGCTTTATCTTCAGAATCGGAAGA
AGTAGGTATTTCTACTACTTCATTGGATGGCATCTCAGTTGCTGCTACCACTACTTCTGAGCCACTAGAGTTGAAGATAC
GGATAGATGTTACTGGTGCGAAAACACAAGAAATTTTTGACGACGTTTTTTCCAAAATGGTTGCTGCTGCACAGCCCATT
CCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACTCCAAATATACCTGAAGATATACTCGTGCAAGTCCTTGGGCCAGAAAA
AGTTTACAAGAATGTGATCAAGAGAGTAATAAACTCAAGCATTGCCGAGTACGTAGAGAAGGAAGGTTTGAAGATTACCA
AGGAGCTTAGTGTTGAGCAGAACTATGAAGAGCTTGAAGCAAAATTTGAACCTGGTACAGAATTCAGCTTTGATGCATTT
ATTCATCTTCAAGAAACAAATAAAGAAAAATGTTAA