
Microexon ID | Ps_NC_039359.1:107836730-107836743:- |
Species | Papaver somniferum | Coordinates | NC_039359.1:107836730..107836743 |
Microexon Cluster ID | MEP37 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Trigger_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAAAACTCCAAAT |
Microexon Amino Acid seq | GKTPN |
Microexon-tag DNA Seq | GTTGCTGCTGCACAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACTCCAAATATACCTGAAGATATACTCGTGCAAGTCCTTGGGCCAGAAAAAGTTTAC |
Microexon-tag Amino Acid Seq | VAAAQPIPGFRRVKGGKTPNIPEDILVQVLGPEKVY |
Microexon-tag spanning region | 107836468-107836970 |
Microexon-tag prediction score | 0.9503 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026592584.1x |
Reference Transcript ID | XM_026592584.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026592584.1 |
Protein ID | XP_026448369.1 |
Gene ID | LOC113348732 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 3e-11 |
Motif start | 109 |
Motif end | 226 |
Protein seq | >XP_026448369.1 MLFAYQCLEKIRFCKFLCYFLFDKMASLSISTFSPKVLLCGNGKEVSSWKARNHVYFRRSASVSIHYRKQEQSRVNQRSS LCAFALSSESEEVGISTTSLDGISVAATTTSEPLELKIRIDVTGAKTQEIFDDVFSKMVAAAQPIPGFRRVKGGKTPNIP EDILVQVLGPEKVYKNVIKRVINSSIAEYVEKEGLKITKELSVEQNYEELEAKFEPGTEFSFDAFIHLQETNKEKC* |
CDS seq | >XM_026592584.1 ATGCTATTTGCCTATCAATGCCTGGAAAAGATCAGGTTCTGTAAATTTCTCTGTTATTTTCTTTTTGATAAAATGGCGTC TCTATCAATATCTACATTTTCTCCCAAAGTTCTTCTATGTGGAAACGGCAAAGAAGTGAGTTCGTGGAAAGCTCGCAACC ATGTTTACTTCAGAAGAAGTGCAAGCGTTAGTATTCACTATCGAAAACAAGAGCAGTCTAGGGTAAATCAAAGATCTTCG CTTTGTGCATTTGCTTTATCTTCAGAATCGGAAGAAGTAGGTATTTCTACTACTTCATTGGATGGCATCTCAGTTGCTGC TACCACTACTTCTGAGCCACTAGAGTTGAAGATACGGATAGATGTTACTGGTGCGAAAACACAAGAAATTTTTGACGACG TTTTTTCCAAAATGGTTGCTGCTGCACAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACTCCAAATATACCT GAAGATATACTCGTGCAAGTCCTTGGGCCAGAAAAAGTTTACAAGAATGTGATCAAGAGAGTAATAAACTCAAGCATTGC CGAGTACGTAGAGAAGGAAGGTTTGAAGATTACCAAGGAGCTTAGTGTTGAGCAGAACTATGAAGAGCTTGAAGCAAAAT TTGAACCTGGTACAGAATTCAGCTTTGATGCATTTATTCATCTTCAAGAAACAAATAAAGAAAAATGTTAA |
Microexon DNA seq | GAAAAACTCCAAAT |
Microexon Amino Acid seq | GKTPN |
Microexon-tag DNA Seq | GTTGCTGCTGCACAGCCCATTCCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACTCCAAATATACCTGAAGATATACTCGTGCAAGTCCTTGGGCCAGAAAAAGTTTAC |
Microexon-tag Amino Acid seq | VAAAQPIPGFRRVKGGKTPNIPEDILVQVLGPEKVY |
Transcript ID | XM_026592585.1 |
Gene ID | Ps.11888 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 1.2e-11 |
Motif start | 44 |
Motif end | 161 |
Protein seq | >XM_026592585.1 MFTSEEVQAVNQRSSLCAFALSSESEEVGISTTSLDGISVAATTTSEPLELKIRIDVTGAKTQEIFDDVFSKMVAAAQPI PGFRRVKGGKTPNIPEDILVQVLGPEKVYKNVIKRVINSSIAEYVEKEGLKITKELSVEQNYEELEAKFEPGTEFSFDAF IHLQETNKEKC* |
CDS seq | >XM_026592585.1 ATGTTTACTTCAGAAGAAGTGCAAGCGGTAAATCAAAGATCTTCGCTTTGTGCATTTGCTTTATCTTCAGAATCGGAAGA AGTAGGTATTTCTACTACTTCATTGGATGGCATCTCAGTTGCTGCTACCACTACTTCTGAGCCACTAGAGTTGAAGATAC GGATAGATGTTACTGGTGCGAAAACACAAGAAATTTTTGACGACGTTTTTTCCAAAATGGTTGCTGCTGCACAGCCCATT CCAGGTTTTCGAAGAGTAAAAGGAGGAAAAACTCCAAATATACCTGAAGATATACTCGTGCAAGTCCTTGGGCCAGAAAA AGTTTACAAGAATGTGATCAAGAGAGTAATAAACTCAAGCATTGCCGAGTACGTAGAGAAGGAAGGTTTGAAGATTACCA AGGAGCTTAGTGTTGAGCAGAACTATGAAGAGCTTGAAGCAAAATTTGAACCTGGTACAGAATTCAGCTTTGATGCATTT ATTCATCTTCAAGAAACAAATAAAGAAAAATGTTAA |