
Microexon ID | Pp_14:13299195-13299208:+ |
Species | Physcomitrium patens | Coordinates | 14:13299195..13299208 |
Microexon Cluster ID | MEP37 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Trigger_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Pp_14:13299195-13299208:+ does not have available information here.
Transcript ID | Pp3c14_20300V3.1 |
Protein ID | Pp3c14_20300V3.1 |
Gene ID | Pp3c14_20300 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 2.8e-12 |
Motif start | 110 |
Motif end | 229 |
Protein seq | >Pp3c14_20300V3.1 MAMAAISSTTCTAAPSSTLRLSSNGSGLRSAFAGPQCSCGGFSSALFGAPILRVQRLSGTPRQRGPVQISAVKYEYKSSQ NTNDLSQAPLSSGNSNLTLIKDARIEAQPQDMKLKLRVDLTGQSTQKAFDTIVRSLAKNAPPVPGFRKAKGGKTSIVPTS VLLNMMGVSRVRKFVIEEIVRTVLVEYVEQEGIKAKKNLATDKTADELNAIFEPGQEFGFDATLELEDDSADEVAKPEAA DASEIEVVGA* |
CDS seq | >Pp3c14_20300V3.1 ATGGCTATGGCGGCGATCTCGTCGACGACGTGCACTGCAGCTCCCTCCAGTACTCTGAGGCTATCTAGCAACGGTAGTGG ATTACGAAGTGCTTTTGCTGGTCCTCAATGTAGCTGCGGAGGATTTTCATCAGCACTCTTCGGTGCCCCTATCTTGAGGG TCCAACGTCTAAGCGGTACACCTCGCCAACGAGGACCTGTTCAAATTTCTGCTGTCAAGTATGAATATAAATCTTCTCAG AATACAAATGATCTAAGTCAAGCTCCGCTATCTAGTGGAAATAGCAATTTGACGTTGATCAAGGATGCTCGCATCGAGGC TCAACCTCAAGACATGAAGCTCAAACTGAGAGTAGATTTGACAGGCCAATCTACACAGAAGGCCTTTGACACAATTGTGA GAAGTCTTGCTAAGAACGCTCCACCAGTACCTGGATTCCGTAAAGCTAAAGGAGGAAAAACATCCATTGTCCCTACAAGT GTGTTGCTGAATATGATGGGAGTCTCAAGGGTACGAAAGTTCGTGATTGAGGAGATTGTGCGGACGGTTTTGGTAGAGTA TGTTGAGCAGGAAGGAATCAAAGCAAAGAAGAACCTCGCAACAGATAAAACTGCGGACGAACTAAATGCCATATTTGAGC CTGGACAAGAATTTGGCTTTGATGCCACCCTTGAGCTGGAGGATGACTCAGCTGATGAAGTGGCAAAGCCAGAAGCAGCA GACGCATCCGAAATTGAGGTTGTGGGTGCATAA |
Microexon DNA seq | GAAAAACATCCATT |
Microexon Amino Acid seq | GKTSI |
Microexon-tag DNA Seq | GCTAAGAACGCTCCACCAGTACCTGGATTCCGTAAAGCTAAAGGAGGAAAAACATCCATTGTCCCTACAAGTGTGTTGCTGAATATGATGGGAGTCTCAAGGGTACGA |
Microexon-tag Amino Acid seq | AKNAPPVPGFRKAKGGKTSIVPTSVLLNMMGVSRVR |
Transcript ID | Pp3c14_20300V3.1 |
Gene ID | Pp.6096 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 2.9e-12 |
Motif start | 110 |
Motif end | 229 |
Protein seq | >Pp3c14_20300V3.1 MAMAAISSTTCTAAPSSTLRLSSNGSGLRSAFAGPQCSCGGFSSALFGAPILRVQRLSGTPRQRGPVQISAVKYEYKSSQ NTNDLSQAPLSSGNSNLTLIKDARIEAQPQDMKLKLRVDLTGQSTQKAFDTIVRSLAKNAPPVPGFRKAKGGKTSIVPTS VLLNMMGVSRVRKFVIEEIVRTVLVEYVEQEGIKAKKNLATDKTADELNAIFEPGQEFGFDATLELEDDSADEVAKPEAA DASEIEVVGA* |
CDS seq | >Pp3c14_20300V3.1 ATGGCTATGGCGGCGATCTCGTCGACGACGTGCACTGCAGCTCCCTCCAGTACTCTGAGGCTATCTAGCAACGGTAGTGG ATTACGAAGTGCTTTTGCTGGTCCTCAATGTAGCTGCGGAGGATTTTCATCAGCACTCTTCGGTGCCCCTATCTTGAGGG TCCAACGTCTAAGCGGTACACCTCGCCAACGAGGACCTGTTCAAATTTCTGCTGTCAAGTATGAATATAAATCTTCTCAG AATACAAATGATCTAAGTCAAGCTCCGCTATCTAGTGGAAATAGCAATTTGACGTTGATCAAGGATGCTCGCATCGAGGC TCAACCTCAAGACATGAAGCTCAAACTGAGAGTAGATTTGACAGGCCAATCTACACAGAAGGCCTTTGACACAATTGTGA GAAGTCTTGCTAAGAACGCTCCACCAGTACCTGGATTCCGTAAAGCTAAAGGAGGAAAAACATCCATTGTCCCTACAAGT GTGTTGCTGAATATGATGGGAGTCTCAAGGGTACGAAAGTTCGTGATTGAGGAGATTGTGCGGACGGTTTTGGTAGAGTA TGTTGAGCAGGAAGGAATCAAAGCAAAGAAGAACCTCGCAACAGATAAAACTGCGGACGAACTAAATGCCATATTTGAGC CTGGACAAGAATTTGGCTTTGATGCCACCCTTGAGCTGGAGGATGACTCAGCTGATGAAGTGGCAAAGCCAGAAGCAGCA GACGCATCCGAAATTGAGGTTGTGGGTGCATAA |