Microexon ID Pp_14:13299195-13299208:+
Species Physcomitrium patens
Coordinates 14:13299195..13299208
Microexon Cluster ID MEP37
Size 14
Phase 1
Pfam Domain Motif Trigger_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Pp_14:13299195-13299208:+ does not have available information here.
Transcript ID Pp3c14_20300V3.1
Protein ID Pp3c14_20300V3.1
Gene ID Pp3c14_20300
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 2.8e-12
Motif start 110
Motif end 229
Protein seq >Pp3c14_20300V3.1
MAMAAISSTTCTAAPSSTLRLSSNGSGLRSAFAGPQCSCGGFSSALFGAPILRVQRLSGTPRQRGPVQISAVKYEYKSSQ
NTNDLSQAPLSSGNSNLTLIKDARIEAQPQDMKLKLRVDLTGQSTQKAFDTIVRSLAKNAPPVPGFRKAKGGKTSIVPTS
VLLNMMGVSRVRKFVIEEIVRTVLVEYVEQEGIKAKKNLATDKTADELNAIFEPGQEFGFDATLELEDDSADEVAKPEAA
DASEIEVVGA*
CDS seq >Pp3c14_20300V3.1
ATGGCTATGGCGGCGATCTCGTCGACGACGTGCACTGCAGCTCCCTCCAGTACTCTGAGGCTATCTAGCAACGGTAGTGG
ATTACGAAGTGCTTTTGCTGGTCCTCAATGTAGCTGCGGAGGATTTTCATCAGCACTCTTCGGTGCCCCTATCTTGAGGG
TCCAACGTCTAAGCGGTACACCTCGCCAACGAGGACCTGTTCAAATTTCTGCTGTCAAGTATGAATATAAATCTTCTCAG
AATACAAATGATCTAAGTCAAGCTCCGCTATCTAGTGGAAATAGCAATTTGACGTTGATCAAGGATGCTCGCATCGAGGC
TCAACCTCAAGACATGAAGCTCAAACTGAGAGTAGATTTGACAGGCCAATCTACACAGAAGGCCTTTGACACAATTGTGA
GAAGTCTTGCTAAGAACGCTCCACCAGTACCTGGATTCCGTAAAGCTAAAGGAGGAAAAACATCCATTGTCCCTACAAGT
GTGTTGCTGAATATGATGGGAGTCTCAAGGGTACGAAAGTTCGTGATTGAGGAGATTGTGCGGACGGTTTTGGTAGAGTA
TGTTGAGCAGGAAGGAATCAAAGCAAAGAAGAACCTCGCAACAGATAAAACTGCGGACGAACTAAATGCCATATTTGAGC
CTGGACAAGAATTTGGCTTTGATGCCACCCTTGAGCTGGAGGATGACTCAGCTGATGAAGTGGCAAAGCCAGAAGCAGCA
GACGCATCCGAAATTGAGGTTGTGGGTGCATAA
Microexon DNA seq GAAAAACATCCATT
Microexon Amino Acid seq GKTSI
Microexon-tag DNA Seq GCTAAGAACGCTCCACCAGTACCTGGATTCCGTAAAGCTAAAGGAGGAAAAACATCCATTGTCCCTACAAGTGTGTTGCTGAATATGATGGGAGTCTCAAGGGTACGA
Microexon-tag Amino Acid seq AKNAPPVPGFRKAKGGKTSIVPTSVLLNMMGVSRVR
Transcript ID Pp3c14_20300V3.1
Gene ID Pp.6096
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 2.9e-12
Motif start 110
Motif end 229
Protein seq >Pp3c14_20300V3.1
MAMAAISSTTCTAAPSSTLRLSSNGSGLRSAFAGPQCSCGGFSSALFGAPILRVQRLSGTPRQRGPVQISAVKYEYKSSQ
NTNDLSQAPLSSGNSNLTLIKDARIEAQPQDMKLKLRVDLTGQSTQKAFDTIVRSLAKNAPPVPGFRKAKGGKTSIVPTS
VLLNMMGVSRVRKFVIEEIVRTVLVEYVEQEGIKAKKNLATDKTADELNAIFEPGQEFGFDATLELEDDSADEVAKPEAA
DASEIEVVGA*
CDS seq >Pp3c14_20300V3.1
ATGGCTATGGCGGCGATCTCGTCGACGACGTGCACTGCAGCTCCCTCCAGTACTCTGAGGCTATCTAGCAACGGTAGTGG
ATTACGAAGTGCTTTTGCTGGTCCTCAATGTAGCTGCGGAGGATTTTCATCAGCACTCTTCGGTGCCCCTATCTTGAGGG
TCCAACGTCTAAGCGGTACACCTCGCCAACGAGGACCTGTTCAAATTTCTGCTGTCAAGTATGAATATAAATCTTCTCAG
AATACAAATGATCTAAGTCAAGCTCCGCTATCTAGTGGAAATAGCAATTTGACGTTGATCAAGGATGCTCGCATCGAGGC
TCAACCTCAAGACATGAAGCTCAAACTGAGAGTAGATTTGACAGGCCAATCTACACAGAAGGCCTTTGACACAATTGTGA
GAAGTCTTGCTAAGAACGCTCCACCAGTACCTGGATTCCGTAAAGCTAAAGGAGGAAAAACATCCATTGTCCCTACAAGT
GTGTTGCTGAATATGATGGGAGTCTCAAGGGTACGAAAGTTCGTGATTGAGGAGATTGTGCGGACGGTTTTGGTAGAGTA
TGTTGAGCAGGAAGGAATCAAAGCAAAGAAGAACCTCGCAACAGATAAAACTGCGGACGAACTAAATGCCATATTTGAGC
CTGGACAAGAATTTGGCTTTGATGCCACCCTTGAGCTGGAGGATGACTCAGCTGATGAAGTGGCAAAGCCAGAAGCAGCA
GACGCATCCGAAATTGAGGTTGTGGGTGCATAA