
Microexon ID | Os_9:20075855-20075868:+ |
Species | Oryza sativa | Coordinates | 9:20075855..20075868 |
Microexon Cluster ID | MEP37 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Trigger_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGAAAACTCGAGAT |
Microexon Amino Acid seq | GKTRD |
Microexon-tag DNA Seq | GTTGCTGCTGCACAACCACTTCCTGGCTTTCGACGAATGAAAGGAGGGAAAACTCGAGATATACCAAAAGAGATTGCTCTGCACTTAATTGGGCCATCAAAGGTGAAG |
Microexon-tag Amino Acid Seq | VAAAQPLPGFRRMKGGKTRDIPKEIALHLIGPSKVK |
Microexon-tag spanning region | 20075289-20076065 |
Microexon-tag prediction score | 0.9598 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os09t0515400-01x |
Reference Transcript ID | Os09t0515400-01 |
Gene ID | Os09g0515400 |
Gene Name | NA |
Transcript ID | Os09t0515400-01 |
Protein ID | Os09t0515400-01 |
Gene ID | Os09g0515400 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 2.3e-08 |
Motif start | 88 |
Motif end | 208 |
Protein seq | >Os09t0515400-01 MELSIAPAAMAMAMGLLAKNPKMINHRYASDMQLQHRLSPACSVMFNKQCSYRITRKACSVLGAVSPIQCTETSTESLVS FKDFLVSVQTEEDGLIKLRVTVADTMTESIFEKVFSKNVAAAQPLPGFRRMKGGKTRDIPKEIALHLIGPSKVKKETIKN IISLTIAEYVQKEDLDASKNLKVLQTYEELEAAFEPGKEFCFDATFHLQ* |
CDS seq | >Os09t0515400-01 ATGGAGTTATCCATTGCGCCTGCGGCGATGGCGATGGCGATGGGCCTCCTCGCGAAGAACCCCAAGATGATCAATCACAG ATATGCCAGTGACATGCAACTGCAGCATCGCCTATCTCCAGCTTGTTCGGTGATGTTCAACAAGCAGTGTTCATACCGAA TCACCCGTAAAGCTTGCAGTGTTCTTGGGGCAGTATCTCCGATACAATGTACAGAAACCAGCACAGAGTCTTTAGTATCT TTCAAAGATTTTCTTGTGTCTGTGCAAACTGAAGAGGATGGACTGATAAAGCTACGAGTAACTGTAGCTGATACAATGAC AGAATCTATCTTTGAGAAAGTTTTCTCAAAGAATGTTGCTGCTGCACAACCACTTCCTGGCTTTCGACGAATGAAAGGAG GGAAAACTCGAGATATACCAAAAGAGATTGCTCTGCACTTAATTGGGCCATCAAAGGTGAAGAAAGAAACCATCAAGAAT ATCATCAGCCTCACAATTGCCGAATATGTCCAAAAGGAGGACCTCGATGCATCAAAAAATCTGAAGGTTCTACAGACCTA TGAGGAGCTTGAAGCAGCATTCGAACCTGGAAAAGAGTTTTGCTTTGATGCAACTTTTCATTTACAGTAG |
Microexon DNA seq | GGAAAACTCGAGAT |
Microexon Amino Acid seq | GKTRD |
Microexon-tag DNA Seq | GTTGCTGCTGCACAACCACTTCCTGGCTTTCGACGAATGAAAGGAGGGAAAACTCGAGATATACCAAAAGAGATTGCTCTGCACTTAATTGGGCCATCAAAGGTGAAG |
Microexon-tag Amino Acid seq | VAAAQPLPGFRRMKGGKTRDIPKEIALHLIGPSKVK |
Transcript ID | Os09t0515400-01 |
Gene ID | Os.38299 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 2.4e-08 |
Motif start | 88 |
Motif end | 208 |
Protein seq | >Os09t0515400-01 MELSIAPAAMAMAMGLLAKNPKMINHRYASDMQLQHRLSPACSVMFNKQCSYRITRKACSVLGAVSPIQCTETSTESLVS FKDFLVSVQTEEDGLIKLRVTVADTMTESIFEKVFSKNVAAAQPLPGFRRMKGGKTRDIPKEIALHLIGPSKVKKETIKN IISLTIAEYVQKEDLDASKNLKVLQTYEELEAAFEPGKEFCFDATFHLQ* |
CDS seq | >Os09t0515400-01 ATGGAGTTATCCATTGCGCCTGCGGCGATGGCGATGGCGATGGGCCTCCTCGCGAAGAACCCCAAGATGATCAATCACAG ATATGCCAGTGACATGCAACTGCAGCATCGCCTATCTCCAGCTTGTTCGGTGATGTTCAACAAGCAGTGTTCATACCGAA TCACCCGTAAAGCTTGCAGTGTTCTTGGGGCAGTATCTCCGATACAATGTACAGAAACCAGCACAGAGTCTTTAGTATCT TTCAAAGATTTTCTTGTGTCTGTGCAAACTGAAGAGGATGGACTGATAAAGCTACGAGTAACTGTAGCTGATACAATGAC AGAATCTATCTTTGAGAAAGTTTTCTCAAAGAATGTTGCTGCTGCACAACCACTTCCTGGCTTTCGACGAATGAAAGGAG GGAAAACTCGAGATATACCAAAAGAGATTGCTCTGCACTTAATTGGGCCATCAAAGGTGAAGAAAGAAACCATCAAGAAT ATCATCAGCCTCACAATTGCCGAATATGTCCAAAAGGAGGACCTCGATGCATCAAAAAATCTGAAGGTTCTACAGACCTA TGAGGAGCTTGAAGCAGCATTCGAACCTGGAAAAGAGTTTTGCTTTGATGCAACTTTTCATTTACAGTAG |