Microexon ID Os_9:20075855-20075868:+
Species Oryza sativa
Coordinates 9:20075855..20075868
Microexon Cluster ID MEP37
Size 14
Phase 1
Pfam Domain Motif Trigger_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGAAAACTCGAGAT
Microexon Amino Acid seq GKTRD
Microexon-tag DNA Seq GTTGCTGCTGCACAACCACTTCCTGGCTTTCGACGAATGAAAGGAGGGAAAACTCGAGATATACCAAAAGAGATTGCTCTGCACTTAATTGGGCCATCAAAGGTGAAG
Microexon-tag Amino Acid Seq VAAAQPLPGFRRMKGGKTRDIPKEIALHLIGPSKVK
Microexon-tag spanning region20075289-20076065
Microexon-tag prediction score0.9598
Overlapped with the annotated transcript (%) 100
New Transcript ID Os09t0515400-01x
Reference Transcript ID Os09t0515400-01
Gene ID Os09g0515400
Gene Name NA
Transcript ID Os09t0515400-01
Protein ID Os09t0515400-01
Gene ID Os09g0515400
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 2.3e-08
Motif start 88
Motif end 208
Protein seq >Os09t0515400-01
MELSIAPAAMAMAMGLLAKNPKMINHRYASDMQLQHRLSPACSVMFNKQCSYRITRKACSVLGAVSPIQCTETSTESLVS
FKDFLVSVQTEEDGLIKLRVTVADTMTESIFEKVFSKNVAAAQPLPGFRRMKGGKTRDIPKEIALHLIGPSKVKKETIKN
IISLTIAEYVQKEDLDASKNLKVLQTYEELEAAFEPGKEFCFDATFHLQ*
CDS seq >Os09t0515400-01
ATGGAGTTATCCATTGCGCCTGCGGCGATGGCGATGGCGATGGGCCTCCTCGCGAAGAACCCCAAGATGATCAATCACAG
ATATGCCAGTGACATGCAACTGCAGCATCGCCTATCTCCAGCTTGTTCGGTGATGTTCAACAAGCAGTGTTCATACCGAA
TCACCCGTAAAGCTTGCAGTGTTCTTGGGGCAGTATCTCCGATACAATGTACAGAAACCAGCACAGAGTCTTTAGTATCT
TTCAAAGATTTTCTTGTGTCTGTGCAAACTGAAGAGGATGGACTGATAAAGCTACGAGTAACTGTAGCTGATACAATGAC
AGAATCTATCTTTGAGAAAGTTTTCTCAAAGAATGTTGCTGCTGCACAACCACTTCCTGGCTTTCGACGAATGAAAGGAG
GGAAAACTCGAGATATACCAAAAGAGATTGCTCTGCACTTAATTGGGCCATCAAAGGTGAAGAAAGAAACCATCAAGAAT
ATCATCAGCCTCACAATTGCCGAATATGTCCAAAAGGAGGACCTCGATGCATCAAAAAATCTGAAGGTTCTACAGACCTA
TGAGGAGCTTGAAGCAGCATTCGAACCTGGAAAAGAGTTTTGCTTTGATGCAACTTTTCATTTACAGTAG
Microexon DNA seq GGAAAACTCGAGAT
Microexon Amino Acid seq GKTRD
Microexon-tag DNA Seq GTTGCTGCTGCACAACCACTTCCTGGCTTTCGACGAATGAAAGGAGGGAAAACTCGAGATATACCAAAAGAGATTGCTCTGCACTTAATTGGGCCATCAAAGGTGAAG
Microexon-tag Amino Acid seq VAAAQPLPGFRRMKGGKTRDIPKEIALHLIGPSKVK
Transcript ID Os09t0515400-01
Gene ID Os.38299
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 2.4e-08
Motif start 88
Motif end 208
Protein seq >Os09t0515400-01
MELSIAPAAMAMAMGLLAKNPKMINHRYASDMQLQHRLSPACSVMFNKQCSYRITRKACSVLGAVSPIQCTETSTESLVS
FKDFLVSVQTEEDGLIKLRVTVADTMTESIFEKVFSKNVAAAQPLPGFRRMKGGKTRDIPKEIALHLIGPSKVKKETIKN
IISLTIAEYVQKEDLDASKNLKVLQTYEELEAAFEPGKEFCFDATFHLQ*
CDS seq >Os09t0515400-01
ATGGAGTTATCCATTGCGCCTGCGGCGATGGCGATGGCGATGGGCCTCCTCGCGAAGAACCCCAAGATGATCAATCACAG
ATATGCCAGTGACATGCAACTGCAGCATCGCCTATCTCCAGCTTGTTCGGTGATGTTCAACAAGCAGTGTTCATACCGAA
TCACCCGTAAAGCTTGCAGTGTTCTTGGGGCAGTATCTCCGATACAATGTACAGAAACCAGCACAGAGTCTTTAGTATCT
TTCAAAGATTTTCTTGTGTCTGTGCAAACTGAAGAGGATGGACTGATAAAGCTACGAGTAACTGTAGCTGATACAATGAC
AGAATCTATCTTTGAGAAAGTTTTCTCAAAGAATGTTGCTGCTGCACAACCACTTCCTGGCTTTCGACGAATGAAAGGAG
GGAAAACTCGAGATATACCAAAAGAGATTGCTCTGCACTTAATTGGGCCATCAAAGGTGAAGAAAGAAACCATCAAGAAT
ATCATCAGCCTCACAATTGCCGAATATGTCCAAAAGGAGGACCTCGATGCATCAAAAAATCTGAAGGTTCTACAGACCTA
TGAGGAGCTTGAAGCAGCATTCGAACCTGGAAAAGAGTTTTGCTTTGATGCAACTTTTCATTTACAGTAG