Microexon ID Os_1:38901456-38901469:-
Species Oryza sativa
Coordinates 1:38901456..38901469
Microexon Cluster ID MEP37
Size 14
Phase 1
Pfam Domain Motif Trigger_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGAGAACATCAAAT
Microexon Amino Acid seq GRTSN
Microexon-tag DNA Seq GCTCGTGATGCACCGCCAGTTCCAGGTTTTAGGAAGTCCAAAGGAGGGAGAACATCAAATATACCAAGCAGCATTCTGCTGCAGATGCTTGGCAAAAGCCGGGTCACC
Microexon-tag Amino Acid Seq ARDAPPVPGFRKSKGGRTSNIPSSILLQMLGKSRVT
Microexon-tag spanning region38901062-38901678
Microexon-tag prediction score0.9565
Overlapped with the annotated transcript (%) 100
New Transcript ID Os01t0894700-01x
Reference Transcript ID Os01t0894700-01
Gene ID Os01g0894700
Gene Name NA
Transcript ID Os01t0894700-01
Protein ID Os01t0894700-01
Gene ID Os01g0894700
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 5.9e-11
Motif start 89
Motif end 211
Protein seq >Os01t0894700-01
MASAATLPKLRFRPKCHGHFQAIYPVHVHIKNCNACKCQIPTHGLLVSSARSRPVLPVSAVGSGGGSSVAEDERKSGLSL
QNAKTSVVSRDDETINVRVDLPGKATQKVFDEALTSLARDAPPVPGFRKSKGGRTSNIPSSILLQMLGKSRVTKFVLQEI
LSITVGDFVKKENLKVNPEIKTTQSEEELESSFTPGSSFSFSVVLQLEKPESDETSENSESDEASEPSS*
CDS seq >Os01t0894700-01
ATGGCGTCAGCGGCGACCCTTCCGAAGCTTCGGTTCAGGCCAAAATGCCACGGCCACTTCCAGGCAATCTATCCGGTTCA
TGTCCATATCAAGAACTGCAATGCTTGCAAGTGTCAGATTCCTACCCACGGGTTGCTTGTTTCCAGCGCGAGAAGTCGTC
CTGTCCTGCCAGTGTCGGCAGTTGGATCAGGCGGGGGCTCATCGGTTGCTGAGGACGAGAGGAAGAGTGGCTTGTCGCTG
CAGAACGCCAAGACATCCGTTGTGTCACGCGACGATGAAACGATCAATGTAAGAGTGGATTTGCCTGGAAAGGCGACACA
GAAGGTGTTTGATGAAGCCTTGACAAGCTTGGCTCGTGATGCACCGCCAGTTCCAGGTTTTAGGAAGTCCAAAGGAGGGA
GAACATCAAATATACCAAGCAGCATTCTGCTGCAGATGCTTGGCAAAAGCCGGGTCACCAAGTTCGTTCTTCAGGAAATA
CTCAGCATCACTGTTGGTGATTTTGTAAAGAAGGAAAACCTGAAGGTGAACCCTGAAATCAAGACAACCCAGTCAGAAGA
AGAGCTCGAGTCATCGTTTACGCCGGGTTCATCATTCAGTTTCAGTGTTGTTCTGCAGCTTGAGAAGCCTGAATCTGATG
AGACCTCAGAGAACTCTGAATCTGACGAGGCTTCTGAGCCCTCTTCTTGA
Microexon DNA seq GGAGAACATCAAAT
Microexon Amino Acid seq GRTSN
Microexon-tag DNA Seq GCTCGTGATGCACCGCCAGTTCCAGGTTTTAGGAAGTCCAAAGGAGGGAGAACATCAAATATACCAAGCAGCATTCTGCTGCAGATGCTTGGCAAAAGCCGGGTCACC
Microexon-tag Amino Acid seq ARDAPPVPGFRKSKGGRTSNIPSSILLQMLGKSRVT
Transcript ID Os01t0894700-01
Gene ID Os.4690
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 5.9e-11
Motif start 89
Motif end 211
Protein seq >Os01t0894700-01
MASAATLPKLRFRPKCHGHFQAIYPVHVHIKNCNACKCQIPTHGLLVSSARSRPVLPVSAVGSGGGSSVAEDERKSGLSL
QNAKTSVVSRDDETINVRVDLPGKATQKVFDEALTSLARDAPPVPGFRKSKGGRTSNIPSSILLQMLGKSRVTKFVLQEI
LSITVGDFVKKENLKVNPEIKTTQSEEELESSFTPGSSFSFSVVLQLEKPESDETSENSESDEASEPSS*
CDS seq >Os01t0894700-01
ATGGCGTCAGCGGCGACCCTTCCGAAGCTTCGGTTCAGGCCAAAATGCCACGGCCACTTCCAGGCAATCTATCCGGTTCA
TGTCCATATCAAGAACTGCAATGCTTGCAAGTGTCAGATTCCTACCCACGGGTTGCTTGTTTCCAGCGCGAGAAGTCGTC
CTGTCCTGCCAGTGTCGGCAGTTGGATCAGGCGGGGGCTCATCGGTTGCTGAGGACGAGAGGAAGAGTGGCTTGTCGCTG
CAGAACGCCAAGACATCCGTTGTGTCACGCGACGATGAAACGATCAATGTAAGAGTGGATTTGCCTGGAAAGGCGACACA
GAAGGTGTTTGATGAAGCCTTGACAAGCTTGGCTCGTGATGCACCGCCAGTTCCAGGTTTTAGGAAGTCCAAAGGAGGGA
GAACATCAAATATACCAAGCAGCATTCTGCTGCAGATGCTTGGCAAAAGCCGGGTCACCAAGTTCGTTCTTCAGGAAATA
CTCAGCATCACTGTTGGTGATTTTGTAAAGAAGGAAAACCTGAAGGTGAACCCTGAAATCAAGACAACCCAGTCAGAAGA
AGAGCTCGAGTCATCGTTTACGCCGGGTTCATCATTCAGTTTCAGTGTTGTTCTGCAGCTTGAGAAGCCTGAATCTGATG
AGACCTCAGAGAACTCTGAATCTGACGAGGCTTCTGAGCCCTCTTCTTGA