Microexon ID Hv_3H:561065753-561065766:+
Species Hordeum   Vulgare
Coordinates 3H:561065753..561065766
Microexon Cluster ID MEP37
Size 14
Phase 1
Pfam Domain Motif Trigger_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGAAAACATCAAAT
Microexon Amino Acid seq GKTSN
Microexon-tag DNA Seq GCACGCGACGCGCCGCCGGTTCCAGGTTTCAGAAGGTCCAAGGGAGGGAAAACATCAAATATACCAAGCAGCATTCTCCTGTCAATGCTGGGCAAGAGCCGGGTCACA
Microexon-tag Amino Acid Seq ARDAPPVPGFRRSKGGKTSNIPSSILLSMLGKSRVT
Microexon-tag spanning region561065585-561066268
Microexon-tag prediction score0.9304
Overlapped with the annotated transcript (%) 100
New Transcript ID HORVU.MOREX.r3.3HG0306130.1x
Reference Transcript ID HORVU.MOREX.r3.3HG0306130.1
Gene ID HORVU.MOREX.r3.3HG0306130
Gene Name NA
Transcript ID HORVU.MOREX.r3.3HG0306130.1
Protein ID
Gene ID HORVU.MOREX.r3.3HG0306130
Gene Name
Pfam domain motif Trigger_N
Motif E-value 6.90E-11
Motif start 89
Motif end 228
Protein seq >HORVU.MOREX.r3.3HG0306130.1
MASAATFPKLRLGPRCHGYSQLQAADPVHIHMKIGGSCKCPMPAQGLLVSTGRSAARHAFLPVSAARSGRGAPVADAAEK
TGLSLDSFKTSVVKRDDEKIHLRIELPGKATQKVFDEALTSLARDAPPVPGFRRSKGGKTSNIPSSILLSMLGKSRVTKF
ILQEILSVTVGDFVKKENLKVNPEIATTQSEGDLESSFAPGSSFGFNVILELEKEADTDDAIDVEVSDSMDAPDVKQSDS
EEPSEEEPPSSTP*
CDS seq >HORVU.MOREX.r3.3HG0306130.1
ATGGCTTCAGCCGCGACCTTTCCGAAGCTCCGGCTCGGTCCACGATGCCACGGCTACTCCCAGCTTCAGGCGGCCGACCC
GGTCCACATCCACATGAAGATTGGCGGTTCCTGCAAGTGCCCCATGCCTGCCCAAGGGTTGCTTGTTTCTACCGGGAGAA
GCGCCGCGAGGCACGCGTTCCTGCCGGTGTCGGCCGCCCGATCAGGTCGGGGCGCACCGGTCGCCGATGCCGCCGAGAAG
ACCGGGCTGTCGTTGGACAGCTTCAAGACATCCGTTGTCAAACGCGACGACGAAAAGATCCATTTAAGAATCGAGTTGCC
TGGGAAGGCAACACAGAAGGTGTTTGATGAGGCTCTGACGAGCCTGGCACGCGACGCGCCGCCGGTTCCAGGTTTCAGAA
GGTCCAAGGGAGGGAAAACATCAAATATACCAAGCAGCATTCTCCTGTCAATGCTGGGCAAGAGCCGGGTCACAAAGTTC
ATCCTTCAGGAAATACTCAGCGTCACCGTCGGAGACTTCGTCAAGAAGGAGAACCTCAAGGTGAACCCTGAAATCGCGAC
GACACAATCGGAAGGCGACCTGGAGTCGTCGTTCGCGCCGGGCTCGTCGTTCGGGTTCAATGTGATCCTGGAGCTGGAGA
AGGAGGCTGACACTGATGATGCTATTGATGTGGAGGTATCCGACTCCATGGATGCTCCCGACGTGAAGCAATCCGACTCC
GAAGAGCCTTCCGAAGAGGAGCCCCCCTCCTCCACGCCCTGA
Hv_3H:561065753-561065766:+ does not have available information here.