Microexon ID Gm_4:13825989-13826002:-
Species Glycine max
Coordinates 4:13825989..13826002
Microexon Cluster ID MEP37
Size 14
Phase 1
Pfam Domain Motif Trigger_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAAAAACGCCAGAT
Microexon Amino Acid seq GKTPD
Microexon-tag DNA Seq GTTGCAGCTGCACAACCTATCCCAGGATTTCGAAGAGTAAAAGGAGGAAAAACGCCAGATATACCAAAAAACATTTTATTAGAGGTGCTTGGACCTTCCAAAGTTTTC
Microexon-tag Amino Acid Seq VAAAQPIPGFRRVKGGKTPDIPKNILLEVLGPSKVF
Microexon-tag spanning region13824972-13826870
Microexon-tag prediction score0.9532
Overlapped with the annotated transcript (%) 100
New Transcript ID KRH62586x
Reference Transcript ID KRH62586
Gene ID GLYMA_04G117800
Gene Name NA
Transcript ID KRH62586
Protein ID KRH62586
Gene ID GLYMA_04G117800
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 2.7e-12
Motif start 81
Motif end 202
Protein seq >KRH62586
MNAASQTFILNLTPQVATCKQRVHEFIVPSLNCRHFGLSWKLRHGARNILRREYIKCLPTADVLSDAQISSDQFEDFSVS
VADNNDSSELKISVEVSGNKTQRIFDDVFKKMVAAAQPIPGFRRVKGGKTPDIPKNILLEVLGPSKVFNEVIKKIINSTV
AEYVEKECLIVSKDLRVEQSFEDLETTFEEGEKFSFDVVLELQK*
CDS seq >KRH62586
ATGAATGCAGCATCTCAAACCTTCATCTTAAATCTAACTCCACAGGTGGCCACATGTAAGCAGAGAGTACATGAGTTTAT
TGTGCCTAGCCTGAATTGTAGACATTTCGGTCTTTCATGGAAGCTTAGACATGGTGCAAGAAATATTTTAAGAAGGGAAT
ACATTAAATGCCTTCCTACTGCTGATGTATTATCAGATGCCCAAATTTCTTCTGATCAGTTTGAGGACTTCTCTGTCTCT
GTTGCTGACAACAATGATTCTAGTGAACTAAAGATAAGCGTAGAAGTATCTGGAAACAAAACTCAAAGGATATTTGATGA
CGTCTTTAAGAAAATGGTTGCAGCTGCACAACCTATCCCAGGATTTCGAAGAGTAAAAGGAGGAAAAACGCCAGATATAC
CAAAAAACATTTTATTAGAGGTGCTTGGACCTTCCAAAGTTTTCAATGAAGTTATCAAGAAAATAATCAACTCAACTGTA
GCTGAATACGTGGAGAAGGAGTGTTTGATAGTTAGCAAGGACCTTAGAGTTGAGCAAAGCTTTGAAGATCTTGAAACTAC
TTTTGAGGAAGGAGAAAAATTCAGCTTTGATGTTGTACTTGAGCTTCAAAAATAA
Microexon DNA seq GAAAAACGCCAGAT
Microexon Amino Acid seq GKTPD
Microexon-tag DNA Seq GTTGCAGCTGCACAACCTATCCCAGGATTTCGAAGAGTAAAAGGAGGAAAAACGCCAGATATACCAAAAAACATTTTATTAGAGGTGCTTGGACCTTCCAAAGTTTTC
Microexon-tag Amino Acid seq VAAAQPIPGFRRVKGGKTPDIPKNILLEVLGPSKVF
Transcript ID Gm.38537.1
Gene ID Gm.38537
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 2.7e-12
Motif start 81
Motif end 202
Protein seq >Gm.38537.1
MNAASQTFILNLTPQVATCKQRVHEFIVPSLNCRHFGLSWKLRHGARNILRREYIKCLPTADVLSDAQISSDQFEDFSVS
VADNNDSSELKISVEVSGNKTQRIFDDVFKKMVAAAQPIPGFRRVKGGKTPDIPKNILLEVLGPSKVFNEVIKKIINSTV
AEYVEKECLIVSKDLRVEQSFEDLETTFEEGEKFSFDVVLELQK*
CDS seq >Gm.38537.1
ATGAATGCAGCATCTCAAACCTTCATCTTAAATCTAACTCCACAGGTGGCCACATGTAAGCAGAGAGTACATGAGTTTAT
TGTGCCTAGCCTGAATTGTAGACATTTCGGTCTTTCATGGAAGCTTAGACATGGTGCAAGAAATATTTTAAGAAGGGAAT
ACATTAAATGCCTTCCTACTGCTGATGTATTATCAGATGCCCAAATTTCTTCTGATCAGTTTGAGGACTTCTCTGTCTCT
GTTGCTGACAACAATGATTCTAGTGAACTAAAGATAAGCGTAGAAGTATCTGGAAACAAAACTCAAAGGATATTTGATGA
CGTCTTTAAGAAAATGGTTGCAGCTGCACAACCTATCCCAGGATTTCGAAGAGTAAAAGGAGGAAAAACGCCAGATATAC
CAAAAAACATTTTATTAGAGGTGCTTGGACCTTCCAAAGTTTTCAATGAAGTTATCAAGAAAATAATCAACTCAACTGTA
GCTGAATACGTGGAGAAGGAGTGTTTGATAGTTAGCAAGGACCTTAGAGTTGAGCAAAGCTTTGAAGATCTTGAAACTAC
TTTTGAGGAAGGAGAAAAATTCAGCTTTGATGTTGTACTTGAGCTTCAAAAATAA