
Microexon ID | Gm_4:13825989-13826002:- |
Species | Glycine max | Coordinates | 4:13825989..13826002 |
Microexon Cluster ID | MEP37 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Trigger_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAAAACGCCAGAT |
Microexon Amino Acid seq | GKTPD |
Microexon-tag DNA Seq | GTTGCAGCTGCACAACCTATCCCAGGATTTCGAAGAGTAAAAGGAGGAAAAACGCCAGATATACCAAAAAACATTTTATTAGAGGTGCTTGGACCTTCCAAAGTTTTC |
Microexon-tag Amino Acid Seq | VAAAQPIPGFRRVKGGKTPDIPKNILLEVLGPSKVF |
Microexon-tag spanning region | 13824972-13826870 |
Microexon-tag prediction score | 0.9532 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH62586x |
Reference Transcript ID | KRH62586 |
Gene ID | GLYMA_04G117800 |
Gene Name | NA |
Transcript ID | KRH62586 |
Protein ID | KRH62586 |
Gene ID | GLYMA_04G117800 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 2.7e-12 |
Motif start | 81 |
Motif end | 202 |
Protein seq | >KRH62586 MNAASQTFILNLTPQVATCKQRVHEFIVPSLNCRHFGLSWKLRHGARNILRREYIKCLPTADVLSDAQISSDQFEDFSVS VADNNDSSELKISVEVSGNKTQRIFDDVFKKMVAAAQPIPGFRRVKGGKTPDIPKNILLEVLGPSKVFNEVIKKIINSTV AEYVEKECLIVSKDLRVEQSFEDLETTFEEGEKFSFDVVLELQK* |
CDS seq | >KRH62586 ATGAATGCAGCATCTCAAACCTTCATCTTAAATCTAACTCCACAGGTGGCCACATGTAAGCAGAGAGTACATGAGTTTAT TGTGCCTAGCCTGAATTGTAGACATTTCGGTCTTTCATGGAAGCTTAGACATGGTGCAAGAAATATTTTAAGAAGGGAAT ACATTAAATGCCTTCCTACTGCTGATGTATTATCAGATGCCCAAATTTCTTCTGATCAGTTTGAGGACTTCTCTGTCTCT GTTGCTGACAACAATGATTCTAGTGAACTAAAGATAAGCGTAGAAGTATCTGGAAACAAAACTCAAAGGATATTTGATGA CGTCTTTAAGAAAATGGTTGCAGCTGCACAACCTATCCCAGGATTTCGAAGAGTAAAAGGAGGAAAAACGCCAGATATAC CAAAAAACATTTTATTAGAGGTGCTTGGACCTTCCAAAGTTTTCAATGAAGTTATCAAGAAAATAATCAACTCAACTGTA GCTGAATACGTGGAGAAGGAGTGTTTGATAGTTAGCAAGGACCTTAGAGTTGAGCAAAGCTTTGAAGATCTTGAAACTAC TTTTGAGGAAGGAGAAAAATTCAGCTTTGATGTTGTACTTGAGCTTCAAAAATAA |
Microexon DNA seq | GAAAAACGCCAGAT |
Microexon Amino Acid seq | GKTPD |
Microexon-tag DNA Seq | GTTGCAGCTGCACAACCTATCCCAGGATTTCGAAGAGTAAAAGGAGGAAAAACGCCAGATATACCAAAAAACATTTTATTAGAGGTGCTTGGACCTTCCAAAGTTTTC |
Microexon-tag Amino Acid seq | VAAAQPIPGFRRVKGGKTPDIPKNILLEVLGPSKVF |
Transcript ID | Gm.38537.1 |
Gene ID | Gm.38537 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 2.7e-12 |
Motif start | 81 |
Motif end | 202 |
Protein seq | >Gm.38537.1 MNAASQTFILNLTPQVATCKQRVHEFIVPSLNCRHFGLSWKLRHGARNILRREYIKCLPTADVLSDAQISSDQFEDFSVS VADNNDSSELKISVEVSGNKTQRIFDDVFKKMVAAAQPIPGFRRVKGGKTPDIPKNILLEVLGPSKVFNEVIKKIINSTV AEYVEKECLIVSKDLRVEQSFEDLETTFEEGEKFSFDVVLELQK* |
CDS seq | >Gm.38537.1 ATGAATGCAGCATCTCAAACCTTCATCTTAAATCTAACTCCACAGGTGGCCACATGTAAGCAGAGAGTACATGAGTTTAT TGTGCCTAGCCTGAATTGTAGACATTTCGGTCTTTCATGGAAGCTTAGACATGGTGCAAGAAATATTTTAAGAAGGGAAT ACATTAAATGCCTTCCTACTGCTGATGTATTATCAGATGCCCAAATTTCTTCTGATCAGTTTGAGGACTTCTCTGTCTCT GTTGCTGACAACAATGATTCTAGTGAACTAAAGATAAGCGTAGAAGTATCTGGAAACAAAACTCAAAGGATATTTGATGA CGTCTTTAAGAAAATGGTTGCAGCTGCACAACCTATCCCAGGATTTCGAAGAGTAAAAGGAGGAAAAACGCCAGATATAC CAAAAAACATTTTATTAGAGGTGCTTGGACCTTCCAAAGTTTTCAATGAAGTTATCAAGAAAATAATCAACTCAACTGTA GCTGAATACGTGGAGAAGGAGTGTTTGATAGTTAGCAAGGACCTTAGAGTTGAGCAAAGCTTTGAAGATCTTGAAACTAC TTTTGAGGAAGGAGAAAAATTCAGCTTTGATGTTGTACTTGAGCTTCAAAAATAA |