Microexon ID Gm_12:3518383-3518396:-
Species Glycine max
Coordinates 12:3518383..3518396
Microexon Cluster ID MEP37
Size 14
Phase 1
Pfam Domain Motif Trigger_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAAAATCATCAAAG
Microexon Amino Acid seq GKSSK
Microexon-tag DNA Seq GGCCGTACTGCCCCACCAGTTCCTGGATTTCGCATGCAAAAAGGAGGAAAATCATCAAAGATCCCAAAGGACTTCCTTGTACAGATGCTTGGGGAAGAACGTGTCACC
Microexon-tag Amino Acid Seq GRTAPPVPGFRMQKGGKSSKIPKDFLVQMLGEERVT
Microexon-tag spanning region3518151-3519203
Microexon-tag prediction score0.9561
Overlapped with the annotated transcript (%) 100
New Transcript ID KRH24559x
Reference Transcript ID KRH24559
Gene ID GLYMA_12G048900
Gene Name NA
Transcript ID KRH24559
Protein ID KRH24559
Gene ID GLYMA_12G048900
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 2.7e-10
Motif start 100
Motif end 220
Protein seq >KRH24559
MVMASKSNSLTFGAACFTTCPFSRTKTCCIHFLAIPNAKSRATFSLGPTLSKRMSLGILSSPIETTPTHLITPISALNSG
LEASITDSNDISAILANAKIVVDSEDENKIQLRVDLTGDQTQKVFDRILTNLGRTAPPVPGFRMQKGGKSSKIPKDFLVQ
MLGEERVTKFSIQEILNSTMADYVKKENLDVKDRKISTTQTQEQLKKSFKPGNEFGFNVIIEPENS*
CDS seq >KRH24559
ATGGTGATGGCCTCCAAGTCTAATTCCCTAACATTTGGAGCTGCTTGTTTCACAACTTGCCCATTCTCTAGAACTAAAAC
CTGCTGCATTCACTTTCTTGCCATTCCAAATGCAAAATCCAGAGCCACTTTTTCTCTCGGTCCCACTCTGTCCAAGAGGA
TGAGCTTAGGTATTCTTTCTAGTCCCATCGAGACAACTCCCACACATCTCATTACACCAATTTCAGCTCTTAATTCAGGT
TTGGAAGCATCAATTACAGATTCGAACGATATTTCAGCCATCTTAGCAAATGCCAAAATAGTAGTAGATTCTGAAGATGA
AAATAAGATACAACTAAGAGTGGACTTGACTGGCGATCAAACACAGAAGGTATTCGACAGGATCCTAACAAACTTAGGCC
GTACTGCCCCACCAGTTCCTGGATTTCGCATGCAAAAAGGAGGAAAATCATCAAAGATCCCAAAGGACTTCCTTGTACAG
ATGCTTGGGGAAGAACGTGTCACCAAGTTTTCAATACAAGAAATACTCAATTCTACCATGGCTGATTATGTGAAAAAGGA
AAACTTGGATGTAAAGGACCGGAAGATAAGCACTACCCAAACGCAAGAACAACTCAAAAAATCATTCAAGCCAGGAAATG
AATTTGGCTTTAATGTTATAATTGAGCCTGAAAATTCATAA
Microexon DNA seq GAAAATCATCAAAG
Microexon Amino Acid seq GKSSK
Microexon-tag DNA Seq GGCCGTACTGCCCCACCAGTTCCTGGATTTCGCATGCAAAAAGGAGGAAAATCATCAAAGATCCCAAAGGACTTCCTTGTACAGATGCTTGGGGAAGAACGTGTCACC
Microexon-tag Amino Acid seq GRTAPPVPGFRMQKGGKSSKIPKDFLVQMLGEERVT
Transcript ID KRH24559
Gene ID Gm.8328
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 2.7e-10
Motif start 100
Motif end 220
Protein seq >KRH24559
MVMASKSNSLTFGAACFTTCPFSRTKTCCIHFLAIPNAKSRATFSLGPTLSKRMSLGILSSPIETTPTHLITPISALNSG
LEASITDSNDISAILANAKIVVDSEDENKIQLRVDLTGDQTQKVFDRILTNLGRTAPPVPGFRMQKGGKSSKIPKDFLVQ
MLGEERVTKFSIQEILNSTMADYVKKENLDVKDRKISTTQTQEQLKKSFKPGNEFGFNVIIEPENS*
CDS seq >KRH24559
ATGGTGATGGCCTCCAAGTCTAATTCCCTAACATTTGGAGCTGCTTGTTTCACAACTTGCCCATTCTCTAGAACTAAAAC
CTGCTGCATTCACTTTCTTGCCATTCCAAATGCAAAATCCAGAGCCACTTTTTCTCTCGGTCCCACTCTGTCCAAGAGGA
TGAGCTTAGGTATTCTTTCTAGTCCCATCGAGACAACTCCCACACATCTCATTACACCAATTTCAGCTCTTAATTCAGGT
TTGGAAGCATCAATTACAGATTCGAACGATATTTCAGCCATCTTAGCAAATGCCAAAATAGTAGTAGATTCTGAAGATGA
AAATAAGATACAACTAAGAGTGGACTTGACTGGCGATCAAACACAGAAGGTATTCGACAGGATCCTAACAAACTTAGGCC
GTACTGCCCCACCAGTTCCTGGATTTCGCATGCAAAAAGGAGGAAAATCATCAAAGATCCCAAAGGACTTCCTTGTACAG
ATGCTTGGGGAAGAACGTGTCACCAAGTTTTCAATACAAGAAATACTCAATTCTACCATGGCTGATTATGTGAAAAAGGA
AAACTTGGATGTAAAGGACCGGAAGATAAGCACTACCCAAACGCAAGAACAACTCAAAAAATCATTCAAGCCAGGAAATG
AATTTGGCTTTAATGTTATAATTGAGCCTGAAAATTCATAA