
Microexon ID | Gm_12:3518383-3518396:- |
Species | Glycine max | Coordinates | 12:3518383..3518396 |
Microexon Cluster ID | MEP37 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Trigger_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAAATCATCAAAG |
Microexon Amino Acid seq | GKSSK |
Microexon-tag DNA Seq | GGCCGTACTGCCCCACCAGTTCCTGGATTTCGCATGCAAAAAGGAGGAAAATCATCAAAGATCCCAAAGGACTTCCTTGTACAGATGCTTGGGGAAGAACGTGTCACC |
Microexon-tag Amino Acid Seq | GRTAPPVPGFRMQKGGKSSKIPKDFLVQMLGEERVT |
Microexon-tag spanning region | 3518151-3519203 |
Microexon-tag prediction score | 0.9561 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH24559x |
Reference Transcript ID | KRH24559 |
Gene ID | GLYMA_12G048900 |
Gene Name | NA |
Transcript ID | KRH24559 |
Protein ID | KRH24559 |
Gene ID | GLYMA_12G048900 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 2.7e-10 |
Motif start | 100 |
Motif end | 220 |
Protein seq | >KRH24559 MVMASKSNSLTFGAACFTTCPFSRTKTCCIHFLAIPNAKSRATFSLGPTLSKRMSLGILSSPIETTPTHLITPISALNSG LEASITDSNDISAILANAKIVVDSEDENKIQLRVDLTGDQTQKVFDRILTNLGRTAPPVPGFRMQKGGKSSKIPKDFLVQ MLGEERVTKFSIQEILNSTMADYVKKENLDVKDRKISTTQTQEQLKKSFKPGNEFGFNVIIEPENS* |
CDS seq | >KRH24559 ATGGTGATGGCCTCCAAGTCTAATTCCCTAACATTTGGAGCTGCTTGTTTCACAACTTGCCCATTCTCTAGAACTAAAAC CTGCTGCATTCACTTTCTTGCCATTCCAAATGCAAAATCCAGAGCCACTTTTTCTCTCGGTCCCACTCTGTCCAAGAGGA TGAGCTTAGGTATTCTTTCTAGTCCCATCGAGACAACTCCCACACATCTCATTACACCAATTTCAGCTCTTAATTCAGGT TTGGAAGCATCAATTACAGATTCGAACGATATTTCAGCCATCTTAGCAAATGCCAAAATAGTAGTAGATTCTGAAGATGA AAATAAGATACAACTAAGAGTGGACTTGACTGGCGATCAAACACAGAAGGTATTCGACAGGATCCTAACAAACTTAGGCC GTACTGCCCCACCAGTTCCTGGATTTCGCATGCAAAAAGGAGGAAAATCATCAAAGATCCCAAAGGACTTCCTTGTACAG ATGCTTGGGGAAGAACGTGTCACCAAGTTTTCAATACAAGAAATACTCAATTCTACCATGGCTGATTATGTGAAAAAGGA AAACTTGGATGTAAAGGACCGGAAGATAAGCACTACCCAAACGCAAGAACAACTCAAAAAATCATTCAAGCCAGGAAATG AATTTGGCTTTAATGTTATAATTGAGCCTGAAAATTCATAA |
Microexon DNA seq | GAAAATCATCAAAG |
Microexon Amino Acid seq | GKSSK |
Microexon-tag DNA Seq | GGCCGTACTGCCCCACCAGTTCCTGGATTTCGCATGCAAAAAGGAGGAAAATCATCAAAGATCCCAAAGGACTTCCTTGTACAGATGCTTGGGGAAGAACGTGTCACC |
Microexon-tag Amino Acid seq | GRTAPPVPGFRMQKGGKSSKIPKDFLVQMLGEERVT |
Transcript ID | KRH24559 |
Gene ID | Gm.8328 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 2.7e-10 |
Motif start | 100 |
Motif end | 220 |
Protein seq | >KRH24559 MVMASKSNSLTFGAACFTTCPFSRTKTCCIHFLAIPNAKSRATFSLGPTLSKRMSLGILSSPIETTPTHLITPISALNSG LEASITDSNDISAILANAKIVVDSEDENKIQLRVDLTGDQTQKVFDRILTNLGRTAPPVPGFRMQKGGKSSKIPKDFLVQ MLGEERVTKFSIQEILNSTMADYVKKENLDVKDRKISTTQTQEQLKKSFKPGNEFGFNVIIEPENS* |
CDS seq | >KRH24559 ATGGTGATGGCCTCCAAGTCTAATTCCCTAACATTTGGAGCTGCTTGTTTCACAACTTGCCCATTCTCTAGAACTAAAAC CTGCTGCATTCACTTTCTTGCCATTCCAAATGCAAAATCCAGAGCCACTTTTTCTCTCGGTCCCACTCTGTCCAAGAGGA TGAGCTTAGGTATTCTTTCTAGTCCCATCGAGACAACTCCCACACATCTCATTACACCAATTTCAGCTCTTAATTCAGGT TTGGAAGCATCAATTACAGATTCGAACGATATTTCAGCCATCTTAGCAAATGCCAAAATAGTAGTAGATTCTGAAGATGA AAATAAGATACAACTAAGAGTGGACTTGACTGGCGATCAAACACAGAAGGTATTCGACAGGATCCTAACAAACTTAGGCC GTACTGCCCCACCAGTTCCTGGATTTCGCATGCAAAAAGGAGGAAAATCATCAAAGATCCCAAAGGACTTCCTTGTACAG ATGCTTGGGGAAGAACGTGTCACCAAGTTTTCAATACAAGAAATACTCAATTCTACCATGGCTGATTATGTGAAAAAGGA AAACTTGGATGTAAAGGACCGGAAGATAAGCACTACCCAAACGCAAGAACAACTCAAAAAATCATTCAAGCCAGGAAATG AATTTGGCTTTAATGTTATAATTGAGCCTGAAAATTCATAA |