Microexon ID At_2:13079926-13079939:-
Species Arabidopsis thaliana
Coordinates 2:13079926..13079939
Microexon Cluster ID MEP37
Size 14
Phase 1
Pfam Domain Motif Trigger_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 46,14,48
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAAAGACCCCAAAT
Microexon Amino Acid seq GKTPN
Microexon-tag DNA Seq GTTGCTGCAGCTCAGCCAATCCCGGGGTTCCGAAGAGTTAAAGGAGGAAAGACCCCAAATATACCCAAAGATGTTTTGTTAGAGATCCTTGGATATTCTAAAGTCTAT
Microexon-tag Amino Acid Seq VAAAQPIPGFRRVKGGKTPNIPKDVLLEILGYSKVY
Microexon-tag spanning region13079611-13080340
Microexon-tag prediction score0.9436
Overlapped with the annotated transcript (%) 100
New Transcript ID AT2G30695.1x
Reference Transcript ID AT2G30695.1
Gene ID AT2G30695
Gene Name NA
Transcript ID AT2G30695.1
Protein ID AT2G30695.1
Gene ID AT2G30695
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 1.3e-12
Motif start 74
Motif end 195
Protein seq >AT2G30695.1
MQTIIHSLSFCSFNSTTINPKPRFQFSSFLTLPPTYSVQQKLCTRATNRQFVAVCAAPSDVETSSKDESVLITKVETETS
NEVKVHVQVSGEKTQTVFNHVFEKMVAAAQPIPGFRRVKGGKTPNIPKDVLLEILGYSKVYKQVIKKLINSAIEDYVKQE
DLKVGKELTVVQSYEDLEETFEPGESFSFDATIKLQEAS*
CDS seq >AT2G30695.1
ATGCAGACAATCATCCACAGTCTCTCGTTTTGTAGCTTTAACTCTACAACAATTAATCCAAAACCCAGATTTCAATTTTC
TTCGTTTTTAACTCTTCCTCCAACTTATTCAGTGCAACAGAAACTCTGTACAAGAGCAACGAATAGACAGTTTGTCGCGG
TTTGTGCTGCACCATCAGATGTAGAGACTTCTTCCAAGGATGAATCTGTTTTGATTACGAAAGTGGAGACTGAAACCAGC
AATGAGGTTAAGGTGCATGTACAAGTGTCAGGAGAGAAGACTCAAACTGTATTCAATCATGTTTTTGAGAAAATGGTTGC
TGCAGCTCAGCCAATCCCGGGGTTCCGAAGAGTTAAAGGAGGAAAGACCCCAAATATACCCAAAGATGTTTTGTTAGAGA
TCCTTGGATATTCTAAAGTCTATAAGCAGGTGATAAAGAAATTAATCAATTCTGCTATCGAAGACTATGTTAAACAGGAA
GACCTTAAGGTTGGCAAAGAGTTGACTGTTGTGCAAAGCTATGAAGATCTTGAAGAAACATTTGAACCAGGTGAAAGTTT
CAGCTTTGATGCTACTATAAAGCTTCAAGAAGCGAGTTGA
Microexon DNA seq GAAAGACCCCAAAT
Microexon Amino Acid seq GKTPN
Microexon-tag DNA Seq GTTGCTGCAGCTCAGCCAATCCCGGGGTTCCGAAGAGTTAAAGGAGGAAAGACCCCAAATATACCCAAAGATGTTTTGTTAGAGATCCTTGGATATTCTAAAGTCTAT
Microexon-tag Amino Acid seq VAAAQPIPGFRRVKGGKTPNIPKDVLLEILGYSKVY
Transcript ID AT2G30695.1
Gene ID At.9862
Gene Name NA
Pfam domain motif Trigger_N
Motif E-value 1.3e-12
Motif start 74
Motif end 195
Protein seq >AT2G30695.1
MQTIIHSLSFCSFNSTTINPKPRFQFSSFLTLPPTYSVQQKLCTRATNRQFVAVCAAPSDVETSSKDESVLITKVETETS
NEVKVHVQVSGEKTQTVFNHVFEKMVAAAQPIPGFRRVKGGKTPNIPKDVLLEILGYSKVYKQVIKKLINSAIEDYVKQE
DLKVGKELTVVQSYEDLEETFEPGESFSFDATIKLQEAS*
CDS seq >AT2G30695.1
ATGCAGACAATCATCCACAGTCTCTCGTTTTGTAGCTTTAACTCTACAACAATTAATCCAAAACCCAGATTTCAATTTTC
TTCGTTTTTAACTCTTCCTCCAACTTATTCAGTGCAACAGAAACTCTGTACAAGAGCAACGAATAGACAGTTTGTCGCGG
TTTGTGCTGCACCATCAGATGTAGAGACTTCTTCCAAGGATGAATCTGTTTTGATTACGAAAGTGGAGACTGAAACCAGC
AATGAGGTTAAGGTGCATGTACAAGTGTCAGGAGAGAAGACTCAAACTGTATTCAATCATGTTTTTGAGAAAATGGTTGC
TGCAGCTCAGCCAATCCCGGGGTTCCGAAGAGTTAAAGGAGGAAAGACCCCAAATATACCCAAAGATGTTTTGTTAGAGA
TCCTTGGATATTCTAAAGTCTATAAGCAGGTGATAAAGAAATTAATCAATTCTGCTATCGAAGACTATGTTAAACAGGAA
GACCTTAAGGTTGGCAAAGAGTTGACTGTTGTGCAAAGCTATGAAGATCTTGAAGAAACATTTGAACCAGGTGAAAGTTT
CAGCTTTGATGCTACTATAAAGCTTCAAGAAGCGAGTTGA