
Microexon ID | At_2:13079926-13079939:- |
Species | Arabidopsis thaliana | Coordinates | 2:13079926..13079939 |
Microexon Cluster ID | MEP37 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | Trigger_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 46,14,48 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYTSSTRCWGCACMRCCARTTCCWGGHTTYCGMAGRSWRAAAGGAGGRAAAACAYCARAKRTACCMARARRCWTYCTWYTRSARATKMTTGGWSMAKMMMRAGTBAMS |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAAGACCCCAAAT |
Microexon Amino Acid seq | GKTPN |
Microexon-tag DNA Seq | GTTGCTGCAGCTCAGCCAATCCCGGGGTTCCGAAGAGTTAAAGGAGGAAAGACCCCAAATATACCCAAAGATGTTTTGTTAGAGATCCTTGGATATTCTAAAGTCTAT |
Microexon-tag Amino Acid Seq | VAAAQPIPGFRRVKGGKTPNIPKDVLLEILGYSKVY |
Microexon-tag spanning region | 13079611-13080340 |
Microexon-tag prediction score | 0.9436 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT2G30695.1x |
Reference Transcript ID | AT2G30695.1 |
Gene ID | AT2G30695 |
Gene Name | NA |
Transcript ID | AT2G30695.1 |
Protein ID | AT2G30695.1 |
Gene ID | AT2G30695 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 1.3e-12 |
Motif start | 74 |
Motif end | 195 |
Protein seq | >AT2G30695.1 MQTIIHSLSFCSFNSTTINPKPRFQFSSFLTLPPTYSVQQKLCTRATNRQFVAVCAAPSDVETSSKDESVLITKVETETS NEVKVHVQVSGEKTQTVFNHVFEKMVAAAQPIPGFRRVKGGKTPNIPKDVLLEILGYSKVYKQVIKKLINSAIEDYVKQE DLKVGKELTVVQSYEDLEETFEPGESFSFDATIKLQEAS* |
CDS seq | >AT2G30695.1 ATGCAGACAATCATCCACAGTCTCTCGTTTTGTAGCTTTAACTCTACAACAATTAATCCAAAACCCAGATTTCAATTTTC TTCGTTTTTAACTCTTCCTCCAACTTATTCAGTGCAACAGAAACTCTGTACAAGAGCAACGAATAGACAGTTTGTCGCGG TTTGTGCTGCACCATCAGATGTAGAGACTTCTTCCAAGGATGAATCTGTTTTGATTACGAAAGTGGAGACTGAAACCAGC AATGAGGTTAAGGTGCATGTACAAGTGTCAGGAGAGAAGACTCAAACTGTATTCAATCATGTTTTTGAGAAAATGGTTGC TGCAGCTCAGCCAATCCCGGGGTTCCGAAGAGTTAAAGGAGGAAAGACCCCAAATATACCCAAAGATGTTTTGTTAGAGA TCCTTGGATATTCTAAAGTCTATAAGCAGGTGATAAAGAAATTAATCAATTCTGCTATCGAAGACTATGTTAAACAGGAA GACCTTAAGGTTGGCAAAGAGTTGACTGTTGTGCAAAGCTATGAAGATCTTGAAGAAACATTTGAACCAGGTGAAAGTTT CAGCTTTGATGCTACTATAAAGCTTCAAGAAGCGAGTTGA |
Microexon DNA seq | GAAAGACCCCAAAT |
Microexon Amino Acid seq | GKTPN |
Microexon-tag DNA Seq | GTTGCTGCAGCTCAGCCAATCCCGGGGTTCCGAAGAGTTAAAGGAGGAAAGACCCCAAATATACCCAAAGATGTTTTGTTAGAGATCCTTGGATATTCTAAAGTCTAT |
Microexon-tag Amino Acid seq | VAAAQPIPGFRRVKGGKTPNIPKDVLLEILGYSKVY |
Transcript ID | AT2G30695.1 |
Gene ID | At.9862 |
Gene Name | NA |
Pfam domain motif | Trigger_N |
Motif E-value | 1.3e-12 |
Motif start | 74 |
Motif end | 195 |
Protein seq | >AT2G30695.1 MQTIIHSLSFCSFNSTTINPKPRFQFSSFLTLPPTYSVQQKLCTRATNRQFVAVCAAPSDVETSSKDESVLITKVETETS NEVKVHVQVSGEKTQTVFNHVFEKMVAAAQPIPGFRRVKGGKTPNIPKDVLLEILGYSKVYKQVIKKLINSAIEDYVKQE DLKVGKELTVVQSYEDLEETFEPGESFSFDATIKLQEAS* |
CDS seq | >AT2G30695.1 ATGCAGACAATCATCCACAGTCTCTCGTTTTGTAGCTTTAACTCTACAACAATTAATCCAAAACCCAGATTTCAATTTTC TTCGTTTTTAACTCTTCCTCCAACTTATTCAGTGCAACAGAAACTCTGTACAAGAGCAACGAATAGACAGTTTGTCGCGG TTTGTGCTGCACCATCAGATGTAGAGACTTCTTCCAAGGATGAATCTGTTTTGATTACGAAAGTGGAGACTGAAACCAGC AATGAGGTTAAGGTGCATGTACAAGTGTCAGGAGAGAAGACTCAAACTGTATTCAATCATGTTTTTGAGAAAATGGTTGC TGCAGCTCAGCCAATCCCGGGGTTCCGAAGAGTTAAAGGAGGAAAGACCCCAAATATACCCAAAGATGTTTTGTTAGAGA TCCTTGGATATTCTAAAGTCTATAAGCAGGTGATAAAGAAATTAATCAATTCTGCTATCGAAGACTATGTTAAACAGGAA GACCTTAAGGTTGGCAAAGAGTTGACTGTTGTGCAAAGCTATGAAGATCTTGAAGAAACATTTGAACCAGGTGAAAGTTT CAGCTTTGATGCTACTATAAAGCTTCAAGAAGCGAGTTGA |