
Microexon ID | Vv_6:634354-634367:+ |
Species | Vistis vinifera | Coordinates | 6:634354..634367 |
Microexon Cluster ID | MEP36 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | EFP_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 15,31,14,48 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GACGCATATACCAG |
Microexon Amino Acid seq | GRIYQ |
Microexon-tag DNA Seq | TTTCTCGGCTCCGATGTCAGACCTGGAAATTGCATCAGAAGAAAAGGACGCATATACCAGGTTTTAAAAGCACAACACACACAGCATGGAAGAGGAGGAGCAACAATA |
Microexon-tag Amino Acid Seq | FLGSDVRPGNCIRRKGRIYQVLKAQHTQHGRGGATI |
Microexon-tag spanning region | 632769-634525 |
Microexon-tag prediction score | 0.9446 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | VIT_06s0004g00460.t01x |
Reference Transcript ID | VIT_06s0004g00460.t01 |
Gene ID | VIT_06s0004g00460 |
Gene Name | NA |
Transcript ID | VIT_06s0004g00460.t01 |
Protein ID | VIT_06s0004g00460.t01 |
Gene ID | VIT_06s0004g00460 |
Gene Name | NA |
Pfam domain motif | EFP_N |
Motif E-value | 4.1e-17 |
Motif start | 78 |
Motif end | 132 |
Protein seq | >VIT_06s0004g00460.t01 MRALLCRRLSRSLYETAASSSSFSSSFTSSSSSCFRRLGFRTLSSLTSSSNHTPLSRTLLASSPWSATQLRGAKFLGSDV RPGNCIRRKGRIYQVLKAQHTQHGRGGATIQVELRDIDSGSKVNEKFRTDETIESVFVEEKSFLYLYTDDDSIVLMEPGT FSQMEVSKDLFGKAAAYLKDDMKVTLHLCDGKPTSASVPKRVTCTVVEAQVPVKGSTATPQYKRVSLDNGLTVLAPPFVL AGDSIVIDTTDDSYITRA* |
CDS seq | >VIT_06s0004g00460.t01 ATGCGAGCTCTGCTCTGCCGGCGACTCTCTCGATCTCTCTACGAAACCGCGGCTTCATCATCATCATTTTCTTCTTCTTT TACTTCTTCTTCATCATCATGTTTTCGTCGGCTCGGATTCAGAACTCTAAGCTCACTCACATCGTCGTCAAACCACACGC CTCTCTCTCGAACCCTACTCGCATCATCCCCGTGGTCCGCCACTCAACTGCGCGGCGCCAAGTTTCTCGGCTCCGATGTC AGACCTGGAAATTGCATCAGAAGAAAAGGACGCATATACCAGGTTTTAAAAGCACAACACACACAGCATGGAAGAGGAGG AGCAACAATACAGGTGGAGCTCCGTGATATTGATAGTGGAAGCAAAGTAAATGAAAAGTTTCGTACTGATGAGACTATTG AAAGTGTATTTGTTGAGGAAAAATCTTTCTTATATTTGTATACTGATGACGACAGCATAGTGCTGATGGAGCCTGGCACA TTTTCACAAATGGAAGTCTCAAAGGACTTGTTTGGCAAAGCTGCTGCATATCTAAAAGATGACATGAAAGTTACACTGCA TTTATGTGATGGAAAGCCAACATCTGCATCAGTTCCAAAACGCGTGACATGCACTGTTGTGGAAGCACAAGTGCCTGTGA AAGGGAGTACAGCCACACCTCAGTATAAAAGGGTTTCGCTGGACAATGGCCTTACAGTGTTGGCACCACCTTTTGTCCTT GCTGGTGACTCAATAGTAATTGATACAACTGATGACTCTTATATCACCAGGGCATAG |
Microexon DNA seq | GACGCATATACCAG |
Microexon Amino Acid seq | GRIYQ |
Microexon-tag DNA Seq | TTTCTCGGCTCCGATGTCAGACCTGGAAATTGCATCAGAAGAAAAGGACGCATATACCAGGTTTTAAAAGCACAACACACACAGCATGGAAGAGGAGGAGCAACAATA |
Microexon-tag Amino Acid seq | FLGSDVRPGNCIRRKGRIYQVLKAQHTQHGRGGATI |
Transcript ID | VIT_06s0004g00460.t01 |
Gene ID | Vv.26317 |
Gene Name | NA |
Pfam domain motif | EFP_N |
Motif E-value | 4.1e-17 |
Motif start | 78 |
Motif end | 132 |
Protein seq | >VIT_06s0004g00460.t01 MRALLCRRLSRSLYETAASSSSFSSSFTSSSSSCFRRLGFRTLSSLTSSSNHTPLSRTLLASSPWSATQLRGAKFLGSDV RPGNCIRRKGRIYQVLKAQHTQHGRGGATIQVELRDIDSGSKVNEKFRTDETIESVFVEEKSFLYLYTDDDSIVLMEPGT FSQMEVSKDLFGKAAAYLKDDMKVTLHLCDGKPTSASVPKRVTCTVVEAQVPVKGSTATPQYKRVSLDNGLTVLAPPFVL AGDSIVIDTTDDSYITRA* |
CDS seq | >VIT_06s0004g00460.t01 ATGCGAGCTCTGCTCTGCCGGCGACTCTCTCGATCTCTCTACGAAACCGCGGCTTCATCATCATCATTTTCTTCTTCTTT TACTTCTTCTTCATCATCATGTTTTCGTCGGCTCGGATTCAGAACTCTAAGCTCACTCACATCGTCGTCAAACCACACGC CTCTCTCTCGAACCCTACTCGCATCATCCCCGTGGTCCGCCACTCAACTGCGCGGCGCCAAGTTTCTCGGCTCCGATGTC AGACCTGGAAATTGCATCAGAAGAAAAGGACGCATATACCAGGTTTTAAAAGCACAACACACACAGCATGGAAGAGGAGG AGCAACAATACAGGTGGAGCTCCGTGATATTGATAGTGGAAGCAAAGTAAATGAAAAGTTTCGTACTGATGAGACTATTG AAAGTGTATTTGTTGAGGAAAAATCTTTCTTATATTTGTATACTGATGACGACAGCATAGTGCTGATGGAGCCTGGCACA TTTTCACAAATGGAAGTCTCAAAGGACTTGTTTGGCAAAGCTGCTGCATATCTAAAAGATGACATGAAAGTTACACTGCA TTTATGTGATGGAAAGCCAACATCTGCATCAGTTCCAAAACGCGTGACATGCACTGTTGTGGAAGCACAAGTGCCTGTGA AAGGGAGTACAGCCACACCTCAGTATAAAAGGGTTTCGCTGGACAATGGCCTTACAGTGTTGGCACCACCTTTTGTCCTT GCTGGTGACTCAATAGTAATTGATACAACTGATGACTCTTATATCACCAGGGCATAG |