Microexon ID Vv_6:634354-634367:+
Species Vistis vinifera
Coordinates 6:634354..634367
Microexon Cluster ID MEP36
Size 14
Phase 1
Pfam Domain Motif EFP_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 15,31,14,48
Microexon location in the Microexon-tag 3
Microexon-tag DNA Seq KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GACGCATATACCAG
Microexon Amino Acid seq GRIYQ
Microexon-tag DNA Seq TTTCTCGGCTCCGATGTCAGACCTGGAAATTGCATCAGAAGAAAAGGACGCATATACCAGGTTTTAAAAGCACAACACACACAGCATGGAAGAGGAGGAGCAACAATA
Microexon-tag Amino Acid Seq FLGSDVRPGNCIRRKGRIYQVLKAQHTQHGRGGATI
Microexon-tag spanning region632769-634525
Microexon-tag prediction score0.9446
Overlapped with the annotated transcript (%) 100
New Transcript ID VIT_06s0004g00460.t01x
Reference Transcript ID VIT_06s0004g00460.t01
Gene ID VIT_06s0004g00460
Gene Name NA
Transcript ID VIT_06s0004g00460.t01
Protein ID VIT_06s0004g00460.t01
Gene ID VIT_06s0004g00460
Gene Name NA
Pfam domain motif EFP_N
Motif E-value 4.1e-17
Motif start 78
Motif end 132
Protein seq >VIT_06s0004g00460.t01
MRALLCRRLSRSLYETAASSSSFSSSFTSSSSSCFRRLGFRTLSSLTSSSNHTPLSRTLLASSPWSATQLRGAKFLGSDV
RPGNCIRRKGRIYQVLKAQHTQHGRGGATIQVELRDIDSGSKVNEKFRTDETIESVFVEEKSFLYLYTDDDSIVLMEPGT
FSQMEVSKDLFGKAAAYLKDDMKVTLHLCDGKPTSASVPKRVTCTVVEAQVPVKGSTATPQYKRVSLDNGLTVLAPPFVL
AGDSIVIDTTDDSYITRA*
CDS seq >VIT_06s0004g00460.t01
ATGCGAGCTCTGCTCTGCCGGCGACTCTCTCGATCTCTCTACGAAACCGCGGCTTCATCATCATCATTTTCTTCTTCTTT
TACTTCTTCTTCATCATCATGTTTTCGTCGGCTCGGATTCAGAACTCTAAGCTCACTCACATCGTCGTCAAACCACACGC
CTCTCTCTCGAACCCTACTCGCATCATCCCCGTGGTCCGCCACTCAACTGCGCGGCGCCAAGTTTCTCGGCTCCGATGTC
AGACCTGGAAATTGCATCAGAAGAAAAGGACGCATATACCAGGTTTTAAAAGCACAACACACACAGCATGGAAGAGGAGG
AGCAACAATACAGGTGGAGCTCCGTGATATTGATAGTGGAAGCAAAGTAAATGAAAAGTTTCGTACTGATGAGACTATTG
AAAGTGTATTTGTTGAGGAAAAATCTTTCTTATATTTGTATACTGATGACGACAGCATAGTGCTGATGGAGCCTGGCACA
TTTTCACAAATGGAAGTCTCAAAGGACTTGTTTGGCAAAGCTGCTGCATATCTAAAAGATGACATGAAAGTTACACTGCA
TTTATGTGATGGAAAGCCAACATCTGCATCAGTTCCAAAACGCGTGACATGCACTGTTGTGGAAGCACAAGTGCCTGTGA
AAGGGAGTACAGCCACACCTCAGTATAAAAGGGTTTCGCTGGACAATGGCCTTACAGTGTTGGCACCACCTTTTGTCCTT
GCTGGTGACTCAATAGTAATTGATACAACTGATGACTCTTATATCACCAGGGCATAG
Microexon DNA seq GACGCATATACCAG
Microexon Amino Acid seq GRIYQ
Microexon-tag DNA Seq TTTCTCGGCTCCGATGTCAGACCTGGAAATTGCATCAGAAGAAAAGGACGCATATACCAGGTTTTAAAAGCACAACACACACAGCATGGAAGAGGAGGAGCAACAATA
Microexon-tag Amino Acid seq FLGSDVRPGNCIRRKGRIYQVLKAQHTQHGRGGATI
Transcript ID VIT_06s0004g00460.t01
Gene ID Vv.26317
Gene Name NA
Pfam domain motif EFP_N
Motif E-value 4.1e-17
Motif start 78
Motif end 132
Protein seq >VIT_06s0004g00460.t01
MRALLCRRLSRSLYETAASSSSFSSSFTSSSSSCFRRLGFRTLSSLTSSSNHTPLSRTLLASSPWSATQLRGAKFLGSDV
RPGNCIRRKGRIYQVLKAQHTQHGRGGATIQVELRDIDSGSKVNEKFRTDETIESVFVEEKSFLYLYTDDDSIVLMEPGT
FSQMEVSKDLFGKAAAYLKDDMKVTLHLCDGKPTSASVPKRVTCTVVEAQVPVKGSTATPQYKRVSLDNGLTVLAPPFVL
AGDSIVIDTTDDSYITRA*
CDS seq >VIT_06s0004g00460.t01
ATGCGAGCTCTGCTCTGCCGGCGACTCTCTCGATCTCTCTACGAAACCGCGGCTTCATCATCATCATTTTCTTCTTCTTT
TACTTCTTCTTCATCATCATGTTTTCGTCGGCTCGGATTCAGAACTCTAAGCTCACTCACATCGTCGTCAAACCACACGC
CTCTCTCTCGAACCCTACTCGCATCATCCCCGTGGTCCGCCACTCAACTGCGCGGCGCCAAGTTTCTCGGCTCCGATGTC
AGACCTGGAAATTGCATCAGAAGAAAAGGACGCATATACCAGGTTTTAAAAGCACAACACACACAGCATGGAAGAGGAGG
AGCAACAATACAGGTGGAGCTCCGTGATATTGATAGTGGAAGCAAAGTAAATGAAAAGTTTCGTACTGATGAGACTATTG
AAAGTGTATTTGTTGAGGAAAAATCTTTCTTATATTTGTATACTGATGACGACAGCATAGTGCTGATGGAGCCTGGCACA
TTTTCACAAATGGAAGTCTCAAAGGACTTGTTTGGCAAAGCTGCTGCATATCTAAAAGATGACATGAAAGTTACACTGCA
TTTATGTGATGGAAAGCCAACATCTGCATCAGTTCCAAAACGCGTGACATGCACTGTTGTGGAAGCACAAGTGCCTGTGA
AAGGGAGTACAGCCACACCTCAGTATAAAAGGGTTTCGCTGGACAATGGCCTTACAGTGTTGGCACCACCTTTTGTCCTT
GCTGGTGACTCAATAGTAATTGATACAACTGATGACTCTTATATCACCAGGGCATAG