Microexon ID Ta_5D:509141128-509141141:-
Species Triticum   Aestivum
Coordinates 5D:509141128..509141141
Microexon Cluster ID MEP36
Size 14
Phase 1
Pfam Domain Motif EFP_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 15,31,14,48
Microexon location in the Microexon-tag 3
Microexon-tag DNA Seq KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCCGCATTTATCAG
Microexon Amino Acid seq GRIYQ
Microexon-tag DNA Seq ATGCTCGGCTCCGACGTGAAACTTGGAAATGTGATACAGAGAAGAGGCCGCATTTATCAGGTGATAAAATCGCATCATTCACATCAAGGAAGAGGAGGAGCCACAATA
Microexon-tag Amino Acid Seq MLGSDVKLGNVIQRRGRIYQVIKSHHSHQGRGGATI
Microexon-tag spanning region509140944-509141948
Microexon-tag prediction score0.9614
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS5D02G466900.1x
Reference Transcript ID TraesCS5D02G466900.1
Gene ID TraesCS5D02G466900
Gene Name NA
Transcript ID TraesCS5D02G466900.1
Protein ID
Gene ID TraesCS5D02G466900
Gene Name
Pfam domain motif EFP_N
Motif E-value 2.00E-15
Motif start 66
Motif end 120
Protein seq >TraesCS5D02G466900.1
MQILRRNLLEASRRLSSLLHSPPPAAQTHAHAVATLSAARRDPSTGSLAATPWAATQRRGAKMLGSDVKLGNVIQRRGRI
YQVIKSHHSHQGRGGATIQVELRDVDTGNKIVERFRTDEALERVFVEDKPFTYLYQEGDNVALMEPNTFEQLEVSKELFG
KNAAYLKDEMKVTVQFFDGRALSGSVPPRVTCTVVEAQPNAKGLTATPQYKRVLLDNGLTVLAPPFVEVGENIVVSTVDD
SYMTRA*
CDS seq >TraesCS5D02G466900.1
ATGCAGATCCTCCGGCGGAACCTCCTCGAAGCTTCCCGCCGTCTCTCCTCCCTCCTCCACTCTCCACCTCCCGCCGCCCA
AACACACGCCCATGCCGTCGCCACCCTCTCCGCCGCCCGGCGGGACCCGTCCACCGGCTCCCTCGCCGCCACGCCGTGGG
CCGCCACGCAGCGCCGCGGCGCGAAGATGCTCGGCTCCGACGTGAAACTTGGAAATGTGATACAGAGAAGAGGCCGCATT
TATCAGGTGATAAAATCGCATCATTCACATCAAGGAAGAGGAGGAGCCACAATACAGGTGGAACTGAGGGATGTTGACAC
TGGTAACAAAATAGTTGAAAGATTTCGTACCGACGAGGCTCTTGAGAGAGTTTTTGTTGAGGATAAACCTTTCACATATC
TGTATCAGGAAGGAGACAACGTGGCACTTATGGAGCCTAACACGTTTGAGCAACTCGAGGTTTCAAAGGAACTGTTTGGC
AAAAACGCTGCATATCTGAAAGATGAGATGAAGGTAACTGTACAATTTTTTGATGGCCGAGCGTTGTCTGGCTCAGTGCC
TCCTCGTGTGACTTGCACTGTTGTTGAAGCACAGCCTAATGCAAAAGGCCTAACTGCTACACCTCAATATAAAAGGGTCT
TGCTGGATAATGGCCTTACAGTGCTTGCCCCGCCATTTGTTGAAGTGGGTGAGAACATTGTTGTTAGTACTGTGGATGAT
TCATATATGACTAGGGCCTAA
Ta_5D:509141128-509141141:- does not have available information here.