
Microexon ID | Ta_5D:509141128-509141141:- |
Species | Triticum Aestivum | Coordinates | 5D:509141128..509141141 |
Microexon Cluster ID | MEP36 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | EFP_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 15,31,14,48 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCCGCATTTATCAG |
Microexon Amino Acid seq | GRIYQ |
Microexon-tag DNA Seq | ATGCTCGGCTCCGACGTGAAACTTGGAAATGTGATACAGAGAAGAGGCCGCATTTATCAGGTGATAAAATCGCATCATTCACATCAAGGAAGAGGAGGAGCCACAATA |
Microexon-tag Amino Acid Seq | MLGSDVKLGNVIQRRGRIYQVIKSHHSHQGRGGATI |
Microexon-tag spanning region | 509140944-509141948 |
Microexon-tag prediction score | 0.9614 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5D02G466900.1x |
Reference Transcript ID | TraesCS5D02G466900.1 |
Gene ID | TraesCS5D02G466900 |
Gene Name | NA |
Transcript ID | TraesCS5D02G466900.1 |
Protein ID | |
Gene ID | TraesCS5D02G466900 |
Gene Name | |
Pfam domain motif | EFP_N |
Motif E-value | 2.00E-15 |
Motif start | 66 |
Motif end | 120 |
Protein seq | >TraesCS5D02G466900.1 MQILRRNLLEASRRLSSLLHSPPPAAQTHAHAVATLSAARRDPSTGSLAATPWAATQRRGAKMLGSDVKLGNVIQRRGRI YQVIKSHHSHQGRGGATIQVELRDVDTGNKIVERFRTDEALERVFVEDKPFTYLYQEGDNVALMEPNTFEQLEVSKELFG KNAAYLKDEMKVTVQFFDGRALSGSVPPRVTCTVVEAQPNAKGLTATPQYKRVLLDNGLTVLAPPFVEVGENIVVSTVDD SYMTRA* |
CDS seq | >TraesCS5D02G466900.1 ATGCAGATCCTCCGGCGGAACCTCCTCGAAGCTTCCCGCCGTCTCTCCTCCCTCCTCCACTCTCCACCTCCCGCCGCCCA AACACACGCCCATGCCGTCGCCACCCTCTCCGCCGCCCGGCGGGACCCGTCCACCGGCTCCCTCGCCGCCACGCCGTGGG CCGCCACGCAGCGCCGCGGCGCGAAGATGCTCGGCTCCGACGTGAAACTTGGAAATGTGATACAGAGAAGAGGCCGCATT TATCAGGTGATAAAATCGCATCATTCACATCAAGGAAGAGGAGGAGCCACAATACAGGTGGAACTGAGGGATGTTGACAC TGGTAACAAAATAGTTGAAAGATTTCGTACCGACGAGGCTCTTGAGAGAGTTTTTGTTGAGGATAAACCTTTCACATATC TGTATCAGGAAGGAGACAACGTGGCACTTATGGAGCCTAACACGTTTGAGCAACTCGAGGTTTCAAAGGAACTGTTTGGC AAAAACGCTGCATATCTGAAAGATGAGATGAAGGTAACTGTACAATTTTTTGATGGCCGAGCGTTGTCTGGCTCAGTGCC TCCTCGTGTGACTTGCACTGTTGTTGAAGCACAGCCTAATGCAAAAGGCCTAACTGCTACACCTCAATATAAAAGGGTCT TGCTGGATAATGGCCTTACAGTGCTTGCCCCGCCATTTGTTGAAGTGGGTGAGAACATTGTTGTTAGTACTGTGGATGAT TCATATATGACTAGGGCCTAA |
Ta_5D:509141128-509141141:- does not have available information here.