Microexon ID Ta_5B:639682210-639682223:-
Species Triticum   Aestivum
Coordinates 5B:639682210..639682223
Microexon Cluster ID MEP36
Size 14
Phase 1
Pfam Domain Motif EFP_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 15,31,14,48
Microexon location in the Microexon-tag 3
Microexon-tag DNA Seq KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCCGCATTTATCAG
Microexon Amino Acid seq GRIYQ
Microexon-tag DNA Seq ATGCTCGGCTCCGACGTCAAACTTGGAAATGTGATACAGAGAAGAGGCCGCATTTATCAGGTGATAAAATCGCATCATTCACATCAAGGAAGAGGAGGAGCCACAATA
Microexon-tag Amino Acid Seq MLGSDVKLGNVIQRRGRIYQVIKSHHSHQGRGGATI
Microexon-tag spanning region639682025-639683025
Microexon-tag prediction score0.9592
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS5B02G465100.1x
Reference Transcript ID TraesCS5B02G465100.1
Gene ID TraesCS5B02G465100
Gene Name NA
Transcript ID TraesCS5B02G465100.1
Protein ID
Gene ID TraesCS5B02G465100
Gene Name
Pfam domain motif EFP_N
Motif E-value 2.00E-15
Motif start 66
Motif end 120
Protein seq >TraesCS5B02G465100.1
MQILRRNLLEASRRLSFLLHSPPPAAHAHAHAVATLSAARRDPSAGSLAATPWAATQRRGAKMLGSDVKLGNVIQRRGRI
YQVIKSHHSHQGRGGATIQVELRDVDTGNKIVERFRTDEALERVFVEDKPFTYLYQEGDNVALMEPNTFEQLEVSKELFG
KNAAYLKDEMKVTLQFFDGRALSGSVPPRVTCTVVEAQPNAKGLTATPQYKRVLLDNGLTVLAPPFVEVGENIVVSTVDD
SYMTRA*
CDS seq >TraesCS5B02G465100.1
ATGCAGATCCTCCGGCGGAACCTTCTCGAAGCTTCCCGCCGCCTCTCCTTCCTCCTCCACTCTCCACCTCCCGCCGCCCA
CGCACACGCCCATGCCGTCGCCACCCTCTCCGCCGCCCGGCGGGACCCGTCCGCGGGCTCCCTCGCCGCCACGCCGTGGG
CCGCCACGCAGCGCCGCGGCGCGAAGATGCTCGGCTCCGACGTCAAACTTGGAAATGTGATACAGAGAAGAGGCCGCATT
TATCAGGTGATAAAATCGCATCATTCACATCAAGGAAGAGGAGGAGCCACAATACAGGTGGAACTGAGGGATGTTGACAC
TGGTAACAAAATAGTTGAAAGATTTCGTACTGACGAGGCTCTTGAGAGAGTTTTTGTTGAGGATAAGCCTTTCACATATC
TGTATCAGGAAGGAGACAATGTGGCACTTATGGAGCCTAACACGTTTGAGCAACTCGAGGTTTCGAAGGAACTGTTTGGC
AAAAACGCTGCATATCTGAAAGATGAGATGAAGGTAACTCTACAATTCTTTGATGGCCGAGCGTTGTCTGGCTCAGTGCC
TCCTCGTGTGACTTGCACTGTTGTTGAAGCACAGCCTAATGCAAAAGGCCTAACTGCTACACCTCAATATAAGAGGGTCT
TGCTGGATAATGGCCTTACAGTGCTTGCCCCGCCTTTTGTTGAAGTGGGTGAGAACATCGTTGTTAGTACTGTGGATGAT
TCATATATGACTAGGGCCTAA
Ta_5B:639682210-639682223:- does not have available information here.