Microexon ID Ta_5A:636417982-636417995:-
Species Triticum   Aestivum
Coordinates 5A:636417982..636417995
Microexon Cluster ID MEP36
Size 14
Phase 1
Pfam Domain Motif EFP_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 15,31,14,48
Microexon location in the Microexon-tag 3
Microexon-tag DNA Seq KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GCCGCATTTATCAG
Microexon Amino Acid seq GRIYQ
Microexon-tag DNA Seq ATGCTCGGCTCCGACGTGAAACTTGGAAATGTGATACAGAGAAAAGGCCGCATTTATCAGGTGATAAAATCGCATCATTCACACCAAGGAAGAGGAGGAGCCACAATA
Microexon-tag Amino Acid Seq MLGSDVKLGNVIQRKGRIYQVIKSHHSHQGRGGATI
Microexon-tag spanning region636417797-636418805
Microexon-tag prediction score0.9618
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS5A02G456100.1x
Reference Transcript ID TraesCS5A02G456100.1
Gene ID TraesCS5A02G456100
Gene Name NA
Transcript ID TraesCS5A02G456100.1
Protein ID
Gene ID TraesCS5A02G456100
Gene Name
Pfam domain motif EFP_N
Motif E-value 4.20E-16
Motif start 57
Motif end 111
Protein seq >TraesCS5A02G456100.1
MQILRRNLLEASRRLSSLLHSPPPATLSAARRDPSTGSLATTPWAATQRRGAKMLGSDVKLGNVIQRKGRIYQVIKSHHS
HQGRGGATIQVELRDVDTGNKIVERFRTDEALERVFVEDKPFTYLYQEGDNVALMEPNTFEQLEVSKELFGKNAAYLKDE
MKVTLQFFDGRALSGSVPPRVTCTVVEAQPNAKGLTATPQYKRVLLDNGLTVLAPPFVEVGENIIVSTVDDSYMTRA*
CDS seq >TraesCS5A02G456100.1
ATGCAGATCCTCCGTCGGAACCTTCTCGAAGCTTCCCGCCGCCTCTCCTCCCTCCTCCACTCTCCACCTCCCGCCACCCT
CTCCGCCGCCCGGCGGGACCCGTCCACCGGCTCCCTCGCCACCACGCCGTGGGCCGCCACGCAGCGCCGCGGCGCGAAGA
TGCTCGGCTCCGACGTGAAACTTGGAAATGTGATACAGAGAAAAGGCCGCATTTATCAGGTGATAAAATCGCATCATTCA
CACCAAGGAAGAGGAGGAGCCACAATACAGGTGGAACTGAGGGATGTTGACACTGGTAACAAAATAGTTGAAAGATTTCG
TACCGACGAGGCTCTTGAGAGAGTTTTTGTTGAGGATAAGCCTTTCACATATCTGTATCAGGAAGGAGACAACGTGGCAC
TTATGGAGCCTAACACGTTTGAGCAACTCGAGGTTTCAAAGGAACTGTTTGGCAAAAACGCTGCATATCTGAAAGATGAG
ATGAAGGTAACTCTACAATTTTTTGATGGCCGAGCGTTGTCTGGCTCAGTGCCTCCTCGTGTGACTTGCACTGTTGTTGA
AGCACAGCCTAATGCAAAAGGCCTAACTGCTACACCTCAATATAAGAGGGTCTTGCTGGATAATGGCCTTACAGTACTTG
CCCCGCCTTTTGTTGAAGTGGGTGAGAACATCATTGTTAGTACTGTGGATGATTCATATATGACTAGGGCCTAA
Ta_5A:636417982-636417995:- does not have available information here.