
Microexon ID | Ta_5A:636417982-636417995:- |
Species | Triticum Aestivum | Coordinates | 5A:636417982..636417995 |
Microexon Cluster ID | MEP36 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | EFP_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 15,31,14,48 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GCCGCATTTATCAG |
Microexon Amino Acid seq | GRIYQ |
Microexon-tag DNA Seq | ATGCTCGGCTCCGACGTGAAACTTGGAAATGTGATACAGAGAAAAGGCCGCATTTATCAGGTGATAAAATCGCATCATTCACACCAAGGAAGAGGAGGAGCCACAATA |
Microexon-tag Amino Acid Seq | MLGSDVKLGNVIQRKGRIYQVIKSHHSHQGRGGATI |
Microexon-tag spanning region | 636417797-636418805 |
Microexon-tag prediction score | 0.9618 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5A02G456100.1x |
Reference Transcript ID | TraesCS5A02G456100.1 |
Gene ID | TraesCS5A02G456100 |
Gene Name | NA |
Transcript ID | TraesCS5A02G456100.1 |
Protein ID | |
Gene ID | TraesCS5A02G456100 |
Gene Name | |
Pfam domain motif | EFP_N |
Motif E-value | 4.20E-16 |
Motif start | 57 |
Motif end | 111 |
Protein seq | >TraesCS5A02G456100.1 MQILRRNLLEASRRLSSLLHSPPPATLSAARRDPSTGSLATTPWAATQRRGAKMLGSDVKLGNVIQRKGRIYQVIKSHHS HQGRGGATIQVELRDVDTGNKIVERFRTDEALERVFVEDKPFTYLYQEGDNVALMEPNTFEQLEVSKELFGKNAAYLKDE MKVTLQFFDGRALSGSVPPRVTCTVVEAQPNAKGLTATPQYKRVLLDNGLTVLAPPFVEVGENIIVSTVDDSYMTRA* |
CDS seq | >TraesCS5A02G456100.1 ATGCAGATCCTCCGTCGGAACCTTCTCGAAGCTTCCCGCCGCCTCTCCTCCCTCCTCCACTCTCCACCTCCCGCCACCCT CTCCGCCGCCCGGCGGGACCCGTCCACCGGCTCCCTCGCCACCACGCCGTGGGCCGCCACGCAGCGCCGCGGCGCGAAGA TGCTCGGCTCCGACGTGAAACTTGGAAATGTGATACAGAGAAAAGGCCGCATTTATCAGGTGATAAAATCGCATCATTCA CACCAAGGAAGAGGAGGAGCCACAATACAGGTGGAACTGAGGGATGTTGACACTGGTAACAAAATAGTTGAAAGATTTCG TACCGACGAGGCTCTTGAGAGAGTTTTTGTTGAGGATAAGCCTTTCACATATCTGTATCAGGAAGGAGACAACGTGGCAC TTATGGAGCCTAACACGTTTGAGCAACTCGAGGTTTCAAAGGAACTGTTTGGCAAAAACGCTGCATATCTGAAAGATGAG ATGAAGGTAACTCTACAATTTTTTGATGGCCGAGCGTTGTCTGGCTCAGTGCCTCCTCGTGTGACTTGCACTGTTGTTGA AGCACAGCCTAATGCAAAAGGCCTAACTGCTACACCTCAATATAAGAGGGTCTTGCTGGATAATGGCCTTACAGTACTTG CCCCGCCTTTTGTTGAAGTGGGTGAGAACATCATTGTTAGTACTGTGGATGATTCATATATGACTAGGGCCTAA |
Ta_5A:636417982-636417995:- does not have available information here.