
Microexon ID | Sm_GL377610:708189-708202:+ |
Species | Selaginella moellendorffii | Coordinates | GL377610:708189..708202 |
Microexon Cluster ID | MEP36 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | EFP_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 15,31,14,48 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGCGCCTTGTGCAG |
Microexon Amino Acid seq | GRLVQ |
Microexon-tag DNA Seq | TTCCCCGACACAGAGGTGAGAGTCGGGCAGATTTTGGAGCGCAAAGGGCGCCTTGTGCAGGTTATAAAGATTGCTCATGCTCATGGAGGCCGTGGTGGAGCTACAATT |
Microexon-tag Amino Acid Seq | FPDTEVRVGQILERKGRLVQVIKIAHAHGGRGGATI |
Microexon-tag spanning region | 706761-708313 |
Microexon-tag prediction score | 0.8469 |
Overlapped with the annotated transcript (%) | 12.72 |
New Transcript ID | EFJ18223x |
Reference Transcript ID | EFJ18223 |
Gene ID | SELMODRAFT_444589 |
Gene Name | NA |
Transcript ID | EFJ18223 |
Protein ID | EFJ18223 |
Gene ID | SELMODRAFT_444589 |
Gene Name | NA |
Pfam domain motif | EFP_N |
Motif E-value | 3e-09 |
Motif start | 384 |
Motif end | 438 |
Protein seq | >EFJ18223 MSSDRRRSSYIWWYDKSLNFFRDRSAKQELTTRSSKTLTDLDCCSVCQEQFTLPCQANCTHWFCGECILRVWEYGSALLP CKCPICRQPITHLWPSEFSTTEEATNFMPLLTDIATYNLNFDSRVITILRLKFPDTEVRCLHVLHFLFLLVLALYVVCTL NLILEGKLAIRTVKKEFMELNAAHRWVAGFNVAERKSGLRVLCSTRSLPRLPIMRGRKLGREAILTVQSLKRAKGVREEM EQVLKSQVSRLLKTDMLEVLRELHRQNDCVLAYEELQGEMLPDGLVYTELMTAYLRCERPNDAIDTFQEMKQLGLTVELK TFTTLAKWLEKKGLGEEASARMQRSRRVAQQGFKALSGFRVFKEDSSSLWHWQQRRGLKIDGLEVRVGQILERKGRLVQV IKIAHAHGGRGGATIPIEYKDLISGIKSTERLRTSESVERVAVDSKTFTYLYDEGQMAILMDPKTFDQVTVDKELFGTGA SYLSDGMSVTVQMHEGKPVTASVPVSLTCKVVEAEPFMKGQTQAAAYKHITLENGKIIMAPCFIVSGDQIVVNTVEDTYV TSGLHVLLLQSFQRITNMTLFQRRVISGSLKSIKQKSKMGDSEQHRHWEWSRLPAELRHRILHLLPLSSALAARAVCKDW KDSLSTWSGRKSWFLVKDEQVEQEGSLKWSMVDAETGSWIRLGGLSRFATSVAAGDGLVCLCVGNSARPEFYVGNPLFEK SWQKLPELPPLKTLTLARLVLSASALTCVLGIVSEEPPGVTVSASVTSNSGSGSSGFKVLVGRCGYIVVYESRAGKWREV QGDTPALALQLLQESDERSIVPVRRGSQLLWSPLRSSGGAHRSSGSHHYRHLKVWRLDEDDELGQECKPVNRMRDYMVQE ISPKGFFAAHWCLREAKLMLLTCTLEKFSPQVRDWGFKRLVLWSFDPHAAKWSSNPLRRPLRDVDLSSSVVYSFQPRLDF SQMAAWCRKCIYLKPQLEKLALEFQHGAKFFCVDVNAVPHALIKRVGVSRMPTIQLWKNKEKRAEIIGGQKAELVVEEVR QMLQTLEK* |
CDS seq | >EFJ18223 ATGAGCAGCGATCGTCGACGCTCTTCTTACATCTGGTGGTACGATAAGAGCTTGAATTTCTTCCGTGACCGCAGCGCCAA GCAAGAACTGACGACTCGATCATCCAAAACTCTCACGGACTTGGATTGCTGCTCGGTTTGCCAGGAGCAATTCACTCTTC CTTGTCAAGCGAATTGCACACACTGGTTCTGTGGAGAATGTATTCTCAGAGTGTGGGAGTATGGATCAGCGTTACTCCCT TGTAAATGTCCCATTTGTCGACAACCAATCACTCACTTGTGGCCTAGCGAATTTTCTACGACTGAAGAGGCTACGAATTT CATGCCACTGCTCACTGACATCGCGACTTACAATCTTAACTTCGATAGCCGAGTGATCACCATTCTGCGACTGAAATTCC CCGACACAGAGGTTCGGTGTCTCCACGTTCTTCACTTCCTTTTTCTCCTGGTTCTCGCTCTTTACGTCGTTTGCACGCTC AATCTCATACTCGAAGGTAAGCTGGCTATTCGGACAGTGAAGAAAGAGTTCATGGAACTTAATGCGGCACACAGATGGGT CGCGGGTTTCAACGTTGCCGAGAGAAAATCCGGACTGCGTGTGCTGTGTTCTACCAGGAGTCTTCCCAGACTACCGATAA TGAGGGGCCGGAAGCTGGGAAGAGAGGCAATTCTCACTGTACAGAGCTTGAAGAGAGCCAAAGGTGTCCGGGAGGAGATG GAACAAGTGCTCAAGTCTCAGGTGTCTCGGCTTCTCAAGACTGACATGCTCGAAGTTCTGCGGGAGCTACACAGGCAAAA TGACTGTGTTCTAGCTTACGAGGAGCTCCAGGGAGAAATGCTGCCGGATGGGCTGGTTTACACTGAGCTCATGACGGCTT ACTTGAGATGCGAGAGACCAAACGATGCGATCGACACATTCCAGGAGATGAAGCAACTGGGGCTCACGGTGGAGCTCAAA ACTTTCACCACTCTGGCCAAATGGTTGGAGAAAAAAGGCCTTGGCGAGGAAGCTAGCGCTAGAATGCAGCGCTCGAGGCG CGTTGCGCAGCAGGGATTTAAGGCGCTGTCTGGATTTCGAGTCTTTAAGGAGGATTCTTCGTCGTTGTGGCATTGGCAGC AGCGCCGCGGATTGAAGATCGATGGATTGGAGGTGAGAGTCGGGCAGATTTTGGAGCGCAAAGGGCGCCTTGTGCAGGTT ATAAAGATTGCTCATGCTCATGGAGGCCGTGGTGGAGCTACAATTCCGATCGAGTACAAGGATCTGATCAGCGGGATCAA GTCAACTGAGCGTTTGCGAACCTCAGAATCGGTGGAAAGAGTGGCTGTCGATTCGAAAACCTTTACATATCTGTACGACG AGGGACAAATGGCGATTTTGATGGATCCAAAAACGTTCGACCAGGTTACAGTGGACAAAGAGCTCTTTGGAACTGGAGCT TCATATCTTTCAGATGGAATGTCTGTGACGGTGCAAATGCACGAGGGTAAACCAGTGACTGCTTCGGTACCAGTTTCTCT GACATGCAAAGTGGTCGAAGCTGAGCCTTTTATGAAAGGCCAGACCCAAGCTGCAGCGTACAAGCACATCACGCTAGAAA ATGGCAAAATAATCATGGCCCCTTGCTTCATCGTTAGTGGAGACCAGATAGTTGTCAACACAGTGGAAGACACTTACGTG ACAAGTGGTCTTCATGTTCTGCTTCTACAGAGCTTCCAAAGAATAACAAACATGACTCTCTTCCAAAGAAGAGTAATCTC GGGGAGTTTAAAGAGCATCAAACAAAAGAGCAAGATGGGGGATAGTGAGCAGCACAGGCATTGGGAATGGTCCAGGCTTC CAGCTGAGCTCCGACACAGGATTCTTCATCTTCTTCCGCTCTCTTCGGCTCTCGCCGCCCGAGCGGTATGCAAGGATTGG AAAGACTCGCTCTCGACATGGTCTGGACGGAAGTCGTGGTTTCTGGTGAAGGACGAGCAAGTCGAGCAAGAAGGCAGCTT GAAGTGGTCAATGGTTGATGCGGAGACAGGCAGCTGGATTCGTCTCGGTGGCCTCTCGCGCTTTGCGACTTCCGTGGCTG CCGGGGACGGCCTGGTGTGCCTGTGCGTGGGGAATTCCGCGAGACCCGAGTTTTACGTGGGGAATCCATTGTTTGAGAAG TCATGGCAGAAGCTACCGGAGCTCCCTCCGCTCAAGACTTTGACACTGGCGAGGCTGGTGCTGAGTGCCTCGGCGCTTAC ATGCGTCCTGGGCATTGTTTCCGAGGAGCCACCGGGTGTTACTGTCAGCGCCAGTGTCACTAGCAACAGCGGCAGTGGAT CTTCAGGCTTCAAGGTCCTGGTTGGACGCTGCGGGTACATCGTTGTGTACGAGTCGCGAGCTGGAAAGTGGCGAGAGGTA CAGGGAGACACGCCGGCGCTGGCTCTTCAGCTTCTCCAGGAATCGGACGAGCGCAGCATTGTGCCGGTGAGACGAGGATC CCAGCTGCTGTGGTCGCCGCTCCGATCCAGCGGAGGAGCTCACCGGAGCAGCGGGTCTCACCACTACAGGCACCTCAAAG TGTGGAGGCTGGACGAGGACGACGAGCTCGGCCAGGAGTGTAAGCCCGTGAACAGGATGAGAGACTACATGGTCCAGGAG ATCTCGCCAAAGGGCTTCTTCGCGGCTCACTGGTGCTTGCGCGAAGCCAAGCTCATGCTGCTCACTTGCACGCTCGAGAA GTTCTCGCCCCAGGTCCGCGACTGGGGATTCAAGCGATTGGTGCTGTGGTCGTTTGATCCTCACGCAGCAAAGTGGTCGT CGAATCCTCTGAGAAGACCTCTTCGAGATGTGGATCTGAGCAGCAGCGTGGTCTACTCGTTCCAGCCGAGGCTGGATTTC AGCCAGATGGCAGCGTGGTGTAGGAAATGCATCTACTTGAAGCCTCAATTGGAGAAGCTGGCTTTGGAATTCCAGCACGG AGCAAAATTCTTTTGTGTGGACGTCAATGCCGTTCCACACGCATTGATTAAACGCGTTGGTGTTTCGAGAATGCCAACTA TTCAGCTGTGGAAGAACAAGGAAAAGAGAGCAGAGATCATTGGAGGTCAAAAGGCCGAGCTGGTTGTGGAAGAAGTCCGG CAAATGTTGCAGACCCTCGAAAAGTGA |
Microexon DNA seq | GGCGCCTTGTGCAG |
Microexon Amino Acid seq | GRLVQ |
Microexon-tag DNA Seq | ATCGATGGATTGGAGGTGAGAGTCGGGCAGATTTTGGAGCGCAAAGGGCGCCTTGTGCAGGTTATAAAGATTGCTCATGCTCATGGAGGCCGTGGTGGAGCTACAATT |
Microexon-tag Amino Acid seq | IDGLEVRVGQILERKGRLVQVIKIAHAHGGRGGATI |
Transcript ID | EFJ18223 |
Gene ID | Sm.19388 |
Gene Name | NA |
Pfam domain motif | EFP_N |
Motif E-value | 3e-09 |
Motif start | 384 |
Motif end | 438 |
Protein seq | >EFJ18223 MSSDRRRSSYIWWYDKSLNFFRDRSAKQELTTRSSKTLTDLDCCSVCQEQFTLPCQANCTHWFCGECILRVWEYGSALLP CKCPICRQPITHLWPSEFSTTEEATNFMPLLTDIATYNLNFDSRVITILRLKFPDTEVRCLHVLHFLFLLVLALYVVCTL NLILEGKLAIRTVKKEFMELNAAHRWVAGFNVAERKSGLRVLCSTRSLPRLPIMRGRKLGREAILTVQSLKRAKGVREEM EQVLKSQVSRLLKTDMLEVLRELHRQNDCVLAYEELQGEMLPDGLVYTELMTAYLRCERPNDAIDTFQEMKQLGLTVELK TFTTLAKWLEKKGLGEEASARMQRSRRVAQQGFKALSGFRVFKEDSSSLWHWQQRRGLKIDGLEVRVGQILERKGRLVQV IKIAHAHGGRGGATIPIEYKDLISGIKSTERLRTSESVERVAVDSKTFTYLYDEGQMAILMDPKTFDQVTVDKELFGTGA SYLSDGMSVTVQMHEGKPVTASVPVSLTCKVVEAEPFMKGQTQAAAYKHITLENGKIIMAPCFIVSGDQIVVNTVEDTYV TSGLHVLLLQSFQRITNMTLFQRRVISGSLKSIKQKSKMGDSEQHRHWEWSRLPAELRHRILHLLPLSSALAARAVCKDW KDSLSTWSGRKSWFLVKDEQVEQEGSLKWSMVDAETGSWIRLGGLSRFATSVAAGDGLVCLCVGNSARPEFYVGNPLFEK SWQKLPELPPLKTLTLARLVLSASALTCVLGIVSEEPPGVTVSASVTSNSGSGSSGFKVLVGRCGYIVVYESRAGKWREV QGDTPALALQLLQESDERSIVPVRRGSQLLWSPLRSSGGAHRSSGSHHYRHLKVWRLDEDDELGQECKPVNRMRDYMVQE ISPKGFFAAHWCLREAKLMLLTCTLEKFSPQVRDWGFKRLVLWSFDPHAAKWSSNPLRRPLRDVDLSSSVVYSFQPRLDF SQMAAWCRKCIYLKPQLEKLALEFQHGAKFFCVDVNAVPHALIKRVGVSRMPTIQLWKNKEKRAEIIGGQKAELVVEEVR QMLQTLEK* |
CDS seq | >EFJ18223 ATGAGCAGCGATCGTCGACGCTCTTCTTACATCTGGTGGTACGATAAGAGCTTGAATTTCTTCCGTGACCGCAGCGCCAA GCAAGAACTGACGACTCGATCATCCAAAACTCTCACGGACTTGGATTGCTGCTCGGTTTGCCAGGAGCAATTCACTCTTC CTTGTCAAGCGAATTGCACACACTGGTTCTGTGGAGAATGTATTCTCAGAGTGTGGGAGTATGGATCAGCGTTACTCCCT TGTAAATGTCCCATTTGTCGACAACCAATCACTCACTTGTGGCCTAGCGAATTTTCTACGACTGAAGAGGCTACGAATTT CATGCCACTGCTCACTGACATCGCGACTTACAATCTTAACTTCGATAGCCGAGTGATCACCATTCTGCGACTGAAATTCC CCGACACAGAGGTTCGGTGTCTCCACGTTCTTCACTTCCTTTTTCTCCTGGTTCTCGCTCTTTACGTCGTTTGCACGCTC AATCTCATACTCGAAGGTAAGCTGGCTATTCGGACAGTGAAGAAAGAGTTCATGGAACTTAATGCGGCACACAGATGGGT CGCGGGTTTCAACGTTGCCGAGAGAAAATCCGGACTGCGTGTGCTGTGTTCTACCAGGAGTCTTCCCAGACTACCGATAA TGAGGGGCCGGAAGCTGGGAAGAGAGGCAATTCTCACTGTACAGAGCTTGAAGAGAGCCAAAGGTGTCCGGGAGGAGATG GAACAAGTGCTCAAGTCTCAGGTGTCTCGGCTTCTCAAGACTGACATGCTCGAAGTTCTGCGGGAGCTACACAGGCAAAA TGACTGTGTTCTAGCTTACGAGGAGCTCCAGGGAGAAATGCTGCCGGATGGGCTGGTTTACACTGAGCTCATGACGGCTT ACTTGAGATGCGAGAGACCAAACGATGCGATCGACACATTCCAGGAGATGAAGCAACTGGGGCTCACGGTGGAGCTCAAA ACTTTCACCACTCTGGCCAAATGGTTGGAGAAAAAAGGCCTTGGCGAGGAAGCTAGCGCTAGAATGCAGCGCTCGAGGCG CGTTGCGCAGCAGGGATTTAAGGCGCTGTCTGGATTTCGAGTCTTTAAGGAGGATTCTTCGTCGTTGTGGCATTGGCAGC AGCGCCGCGGATTGAAGATCGATGGATTGGAGGTGAGAGTCGGGCAGATTTTGGAGCGCAAAGGGCGCCTTGTGCAGGTT ATAAAGATTGCTCATGCTCATGGAGGCCGTGGTGGAGCTACAATTCCGATCGAGTACAAGGATCTGATCAGCGGGATCAA GTCAACTGAGCGTTTGCGAACCTCAGAATCGGTGGAAAGAGTGGCTGTCGATTCGAAAACCTTTACATATCTGTACGACG AGGGACAAATGGCGATTTTGATGGATCCAAAAACGTTCGACCAGGTTACAGTGGACAAAGAGCTCTTTGGAACTGGAGCT TCATATCTTTCAGATGGAATGTCTGTGACGGTGCAAATGCACGAGGGTAAACCAGTGACTGCTTCGGTACCAGTTTCTCT GACATGCAAAGTGGTCGAAGCTGAGCCTTTTATGAAAGGCCAGACCCAAGCTGCAGCGTACAAGCACATCACGCTAGAAA ATGGCAAAATAATCATGGCCCCTTGCTTCATCGTTAGTGGAGACCAGATAGTTGTCAACACAGTGGAAGACACTTACGTG ACAAGTGGTCTTCATGTTCTGCTTCTACAGAGCTTCCAAAGAATAACAAACATGACTCTCTTCCAAAGAAGAGTAATCTC GGGGAGTTTAAAGAGCATCAAACAAAAGAGCAAGATGGGGGATAGTGAGCAGCACAGGCATTGGGAATGGTCCAGGCTTC CAGCTGAGCTCCGACACAGGATTCTTCATCTTCTTCCGCTCTCTTCGGCTCTCGCCGCCCGAGCGGTATGCAAGGATTGG AAAGACTCGCTCTCGACATGGTCTGGACGGAAGTCGTGGTTTCTGGTGAAGGACGAGCAAGTCGAGCAAGAAGGCAGCTT GAAGTGGTCAATGGTTGATGCGGAGACAGGCAGCTGGATTCGTCTCGGTGGCCTCTCGCGCTTTGCGACTTCCGTGGCTG CCGGGGACGGCCTGGTGTGCCTGTGCGTGGGGAATTCCGCGAGACCCGAGTTTTACGTGGGGAATCCATTGTTTGAGAAG TCATGGCAGAAGCTACCGGAGCTCCCTCCGCTCAAGACTTTGACACTGGCGAGGCTGGTGCTGAGTGCCTCGGCGCTTAC ATGCGTCCTGGGCATTGTTTCCGAGGAGCCACCGGGTGTTACTGTCAGCGCCAGTGTCACTAGCAACAGCGGCAGTGGAT CTTCAGGCTTCAAGGTCCTGGTTGGACGCTGCGGGTACATCGTTGTGTACGAGTCGCGAGCTGGAAAGTGGCGAGAGGTA CAGGGAGACACGCCGGCGCTGGCTCTTCAGCTTCTCCAGGAATCGGACGAGCGCAGCATTGTGCCGGTGAGACGAGGATC CCAGCTGCTGTGGTCGCCGCTCCGATCCAGCGGAGGAGCTCACCGGAGCAGCGGGTCTCACCACTACAGGCACCTCAAAG TGTGGAGGCTGGACGAGGACGACGAGCTCGGCCAGGAGTGTAAGCCCGTGAACAGGATGAGAGACTACATGGTCCAGGAG ATCTCGCCAAAGGGCTTCTTCGCGGCTCACTGGTGCTTGCGCGAAGCCAAGCTCATGCTGCTCACTTGCACGCTCGAGAA GTTCTCGCCCCAGGTCCGCGACTGGGGATTCAAGCGATTGGTGCTGTGGTCGTTTGATCCTCACGCAGCAAAGTGGTCGT CGAATCCTCTGAGAAGACCTCTTCGAGATGTGGATCTGAGCAGCAGCGTGGTCTACTCGTTCCAGCCGAGGCTGGATTTC AGCCAGATGGCAGCGTGGTGTAGGAAATGCATCTACTTGAAGCCTCAATTGGAGAAGCTGGCTTTGGAATTCCAGCACGG AGCAAAATTCTTTTGTGTGGACGTCAATGCCGTTCCACACGCATTGATTAAACGCGTTGGTGTTTCGAGAATGCCAACTA TTCAGCTGTGGAAGAACAAGGAAAAGAGAGCAGAGATCATTGGAGGTCAAAAGGCCGAGCTGGTTGTGGAAGAAGTCCGG CAAATGTTGCAGACCCTCGAAAAGTGA |