Microexon ID Sb_1:3536960-3536973:+
Species Sorghum   Bicolor
Coordinates 1:3536960..3536973
Microexon Cluster ID MEP36
Size 14
Phase 1
Pfam Domain Motif EFP_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 15,31,14,48
Microexon location in the Microexon-tag 3
Microexon-tag DNA Seq KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTCGCATTTATCAG
Microexon Amino Acid seq GRIYQ
Microexon-tag DNA Seq ATGCTCGGCTCCGACGTGAAACTTGGAAATATCATACAAAGAAGAGGTCGCATTTATCAGGTAATAAAAGCACAACATTCGCATCAAGGAAGAGGAGGAGCCACAATA
Microexon-tag Amino Acid Seq MLGSDVKLGNIIQRRGRIYQVIKAQHSHQGRGGATI
Microexon-tag spanning region3536286-3537131
Microexon-tag prediction score0.9677
Overlapped with the annotated transcript (%) 100
New Transcript ID KXG37316x
Reference Transcript ID KXG37316
Gene ID SORBI_3001G048200
Gene Name NA
Transcript ID KXG37316
Protein ID
Gene ID SORBI_3001G048200
Gene Name
Pfam domain motif EFP_N
Motif E-value 2.10E-16
Motif start 66
Motif end 120
Protein seq >KXG37316
MQILRRKVLEASRRLPLFYAAHSGRAHAVATLAGAAARWAPPATSGSLAAAPWAATQRRGVKMLGSDVKLGNIIQRRGRI
YQVIKAQHSHQGRGGATIQVELRDVDTGNKLTERFRTDEALERVFVEEKSFTYLYQEGDTVTLMEPETFEQLEVSKELFG
KAAAYLKDEMKVNLQYFDGRPMSGTVPQRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLSVLAPPFIEAGEKIVISTADD
SYMTRA*
CDS seq >KXG37316
ATGCAGATCCTCCGGCGGAAGGTTCTTGAGGCTTCCCGCCGCCTCCCTCTCTTCTACGCTGCGCACAGCGGACGCGCCCA
TGCGGTCGCTACGCTGGCGGGCGCCGCCGCGCGGTGGGCCCCGCCGGCCACCTCGGGCTCACTTGCCGCTGCTCCGTGGG
CTGCCACCCAGCGCCGCGGCGTCAAGATGCTCGGCTCCGACGTGAAACTTGGAAATATCATACAAAGAAGAGGTCGCATT
TATCAGGTAATAAAAGCACAACATTCGCATCAAGGAAGAGGAGGAGCCACAATACAGGTCGAACTGAGGGATGTTGACAC
TGGAAACAAATTAACAGAAAGATTTCGTACTGATGAGGCCCTTGAGAGAGTTTTTGTTGAGGAGAAGTCATTCACATATC
TGTATCAGGAAGGAGATACTGTGACACTTATGGAGCCTGAAACATTTGAGCAACTTGAAGTTTCGAAGGAACTGTTTGGC
AAAGCTGCAGCATACCTGAAAGATGAAATGAAGGTGAATCTACAATACTTTGATGGCCGGCCAATGTCTGGTACAGTTCC
TCAACGAGTGACTTGTACTGTTGTTGAAGCACAGCCAAATACAAAAGGGCTAACTGCTCAACCTCAGTATAAAAGGGTCT
TGCTGGACAATGGTCTTTCAGTGCTTGCACCACCCTTTATTGAAGCGGGTGAGAAGATTGTAATCAGTACAGCCGATGAT
TCTTATATGACGAGGGCATAA
Sb_1:3536960-3536973:+ does not have available information here.