
Microexon ID | Sb_1:3536960-3536973:+ |
Species | Sorghum Bicolor | Coordinates | 1:3536960..3536973 |
Microexon Cluster ID | MEP36 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | EFP_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 15,31,14,48 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTCGCATTTATCAG |
Microexon Amino Acid seq | GRIYQ |
Microexon-tag DNA Seq | ATGCTCGGCTCCGACGTGAAACTTGGAAATATCATACAAAGAAGAGGTCGCATTTATCAGGTAATAAAAGCACAACATTCGCATCAAGGAAGAGGAGGAGCCACAATA |
Microexon-tag Amino Acid Seq | MLGSDVKLGNIIQRRGRIYQVIKAQHSHQGRGGATI |
Microexon-tag spanning region | 3536286-3537131 |
Microexon-tag prediction score | 0.9677 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KXG37316x |
Reference Transcript ID | KXG37316 |
Gene ID | SORBI_3001G048200 |
Gene Name | NA |
Transcript ID | KXG37316 |
Protein ID | |
Gene ID | SORBI_3001G048200 |
Gene Name | |
Pfam domain motif | EFP_N |
Motif E-value | 2.10E-16 |
Motif start | 66 |
Motif end | 120 |
Protein seq | >KXG37316 MQILRRKVLEASRRLPLFYAAHSGRAHAVATLAGAAARWAPPATSGSLAAAPWAATQRRGVKMLGSDVKLGNIIQRRGRI YQVIKAQHSHQGRGGATIQVELRDVDTGNKLTERFRTDEALERVFVEEKSFTYLYQEGDTVTLMEPETFEQLEVSKELFG KAAAYLKDEMKVNLQYFDGRPMSGTVPQRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLSVLAPPFIEAGEKIVISTADD SYMTRA* |
CDS seq | >KXG37316 ATGCAGATCCTCCGGCGGAAGGTTCTTGAGGCTTCCCGCCGCCTCCCTCTCTTCTACGCTGCGCACAGCGGACGCGCCCA TGCGGTCGCTACGCTGGCGGGCGCCGCCGCGCGGTGGGCCCCGCCGGCCACCTCGGGCTCACTTGCCGCTGCTCCGTGGG CTGCCACCCAGCGCCGCGGCGTCAAGATGCTCGGCTCCGACGTGAAACTTGGAAATATCATACAAAGAAGAGGTCGCATT TATCAGGTAATAAAAGCACAACATTCGCATCAAGGAAGAGGAGGAGCCACAATACAGGTCGAACTGAGGGATGTTGACAC TGGAAACAAATTAACAGAAAGATTTCGTACTGATGAGGCCCTTGAGAGAGTTTTTGTTGAGGAGAAGTCATTCACATATC TGTATCAGGAAGGAGATACTGTGACACTTATGGAGCCTGAAACATTTGAGCAACTTGAAGTTTCGAAGGAACTGTTTGGC AAAGCTGCAGCATACCTGAAAGATGAAATGAAGGTGAATCTACAATACTTTGATGGCCGGCCAATGTCTGGTACAGTTCC TCAACGAGTGACTTGTACTGTTGTTGAAGCACAGCCAAATACAAAAGGGCTAACTGCTCAACCTCAGTATAAAAGGGTCT TGCTGGACAATGGTCTTTCAGTGCTTGCACCACCCTTTATTGAAGCGGGTGAGAAGATTGTAATCAGTACAGCCGATGAT TCTTATATGACGAGGGCATAA |
Sb_1:3536960-3536973:+ does not have available information here.