| Microexon ID | Pt_1:280170-280183:+ |
| Species | Populus Trichocarpa | Coordinates | 1:280170..280183 |
| Microexon Cluster ID | MEP36 |
| Size | 14 |
| Phase | 1 |
| Pfam Domain Motif | EFP_N |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 15,31,14,48 |
| Microexon location in the Microexon-tag | 3 |
| Microexon-tag DNA Seq | KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | GAAGAATTTTCGAG |
| Microexon Amino Acid seq | GRIFE |
| Microexon-tag DNA Seq | GCTTATGGAGCTGATTTAAGACCTGGAAATGTAATTGAAAAATCAGGAAGAATTTTCGAGGTGGTGGATGCGGAGCATAAACAGCGAGGAAGAGGAGGAGCGATTTTG |
| Microexon-tag Amino Acid Seq | AYGADLRPGNVIEKSGRIFEVVDAEHKQRGRGGAIL |
| Microexon-tag spanning region | 272840-280316 |
| Microexon-tag prediction score | 0.9059 |
| Overlapped with the annotated transcript (%) | 21.58 |
| New Transcript ID | Potri.001G004300.3.v4.1x |
| Reference Transcript ID | Potri.001G004300.3.v4.1 |
| Gene ID | Potri.001G004300.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.001G004300.3.v4.1 |
| Protein ID | |
| Gene ID | Potri.001G004300.v4.1 |
| Gene Name | |
| Pfam domain motif | EFP_N |
| Motif E-value | 4.10E-11 |
| Motif start | 68 |
| Motif end | 123 |
| Protein seq | >Potri.001G004300.3.v4.1 MRALLQLSKRLSRTLVFSSSYSSLTSSRTFATLTLLSPDCHGAAITTNGNVYARPWFAIQHRGVKVNAIHLRPGNVIEKS GRIFEVVDAEHKQRGRGGAILTLELRDVDSGNKQTFRFGAEEAVERVFVEERSFTCLYTEHESVYLMDLEKFEQLEVPLI LFGQAAAYLKEEMKVKMQLFDGRPLSGSIPKQVTCVIKETQDHAATPRYKKAVLDNGLIIQVPTYIETGEAVVVNTEDGS FVTRANK* |
| CDS seq | >Potri.001G004300.3.v4.1 ATGCGAGCTTTACTGCAACTTAGCAAGAGACTCTCTCGCACTCTTGTCTTCTCTTCCTCCTACTCCTCTCTTACTTCTTC TAGAACTTTCGCTACACTCACTCTATTATCACCTGACTGCCACGGTGCTGCCATCACCACCAACGGCAATGTTTACGCCA GGCCTTGGTTCGCAATCCAACACCGCGGCGTTAAAGTCAATGCTATTCATTTAAGACCTGGAAATGTAATTGAAAAATCA GGAAGAATTTTCGAGGTGGTGGATGCGGAGCATAAACAGCGAGGAAGAGGAGGAGCGATTTTGACGTTGGAGCTTCGAGA TGTTGACAGTGGAAACAAGCAAACCTTTCGCTTTGGTGCAGAGGAGGCTGTTGAAAGGGTTTTTGTTGAGGAGAGGTCTT TCACATGTTTGTACACAGAACATGAATCAGTATATCTAATGGACCTTGAGAAATTTGAGCAACTCGAAGTGCCGCTGATC TTGTTTGGCCAAGCTGCTGCATATCTAAAAGAGGAAATGAAAGTTAAAATGCAGTTATTTGATGGAAGACCTTTGTCTGG ATCAATTCCAAAACAAGTAACATGTGTTATTAAGGAGACACAAGATCATGCAGCTACACCTCGGTACAAAAAGGCTGTGC TGGACAATGGTCTCATTATTCAAGTGCCTACATACATTGAGACTGGAGAAGCAGTTGTTGTCAATACTGAAGATGGCTCG TTTGTTACCAGGGCCAACAAATAA |
Pt_1:280170-280183:+ does not have available information here.