Microexon ID Ps_NC_039368.1:39028757-39028770:+
Species Papaver somniferum
Coordinates NC_039368.1:39028757..39028770
Microexon Cluster ID MEP36
Size 14
Phase 1
Pfam Domain Motif EFP_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 15,31,14,48
Microexon location in the Microexon-tag 3
Microexon-tag DNA Seq KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GACGTATTTATCAG
Microexon Amino Acid seq GRIYQ
Microexon-tag DNA Seq GTTTTAGGCACTGATGTCAGAAGCGGGAATGTCATCCAAAGGAAAGGACGTATTTATCAGGTTCTTAAAGCACAACACACACAGCAGGGAAGAGGAGGAGCAATAATA
Microexon-tag Amino Acid Seq VLGTDVRSGNVIQRKGRIYQVLKAQHTQQGRGGAII
Microexon-tag spanning region39028048-39029037
Microexon-tag prediction score0.9472
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026569076.1x
Reference Transcript ID XM_026569076.1
Gene ID NA
Gene Name NA
Transcript ID XM_026569076.1
Protein ID XP_026424861.1
Gene ID LOC113321197
Gene Name NA
Pfam domain motif EFP_N
Motif E-value 5.5e-18
Motif start 107
Motif end 161
Protein seq >XP_026424861.1
MRMKGSLTNIFRRRYRAALQDLERSTEVLKSEHKHQHTKIPHYLNIKELGLLGNSVYKGPFYRSITTLTASLQNYQTISP
NNSSLSCGTFDKPWSASQHRGVKVLGTDVRSGNVIQRKGRIYQVLKAQHTQQGRGGAIIQVELRDVDSGNKVTERFRTDE
AMERVFVEEKSFTYLYTIGESVTLMEPETYEQMEVTKDLFGKASAYLKEDMKVSLQLYDGKVMSATIPPRVTCTVAEAKG
NMKGLTVTPQYRRVLLENGLTVQAPPFIEVGDQIIVNTVDDSYVTRAKE*
CDS seq >XM_026569076.1
ATGAGGATGAAAGGGAGTTTGACTAATATCTTCAGACGAAGATATCGTGCAGCTCTTCAAGATTTAGAAAGATCAACAGA
AGTTTTAAAGTCCGAACACAAACACCAGCACACTAAGATTCCTCATTATCTGAACATAAAAGAACTTGGTTTACTGGGAA
ATTCAGTTTACAAAGGACCTTTTTACAGAAGCATCACAACTCTCACGGCATCACTACAAAATTACCAGACCATCTCACCT
AATAATAGTTCGCTTTCGTGTGGTACCTTTGACAAACCATGGTCCGCTTCCCAACACCGTGGAGTTAAAGTTTTAGGCAC
TGATGTCAGAAGCGGGAATGTCATCCAAAGGAAAGGACGTATTTATCAGGTTCTTAAAGCACAACACACACAGCAGGGAA
GAGGAGGAGCAATAATACAGGTGGAATTACGTGATGTTGACAGTGGAAACAAAGTGACCGAAAGATTTCGCACCGATGAG
GCTATGGAAAGAGTTTTTGTCGAAGAGAAATCTTTCACCTATTTGTACACCATAGGCGAGTCAGTAACACTAATGGAGCC
TGAAACATATGAACAAATGGAGGTAACGAAGGACTTGTTTGGCAAGGCTTCTGCATACCTAAAAGAGGATATGAAAGTCA
GCTTGCAATTATATGATGGTAAAGTGATGTCTGCTACTATTCCACCACGGGTGACATGTACTGTTGCTGAAGCAAAAGGC
AATATGAAGGGGCTGACTGTCACACCTCAGTATAGAAGAGTTTTGCTGGAAAATGGTCTTACAGTGCAAGCGCCTCCATT
CATTGAAGTTGGTGATCAGATAATTGTCAATACAGTCGATGACTCATATGTCACTAGGGCGAAGGAGTGA
Microexon DNA seq GACGTATTTATCAG
Microexon Amino Acid seq GRIYQ
Microexon-tag DNA Seq GTTTTAGGCACTGATGTCAGAAGCGGGAATGTCATCCAAAGGAAAGGACGTATTTATCAGGTTCTTAAAGCACAACACACACAGCAGGGAAGAGGAGGAGCAATAATA
Microexon-tag Amino Acid seq VLGTDVRSGNVIQRKGRIYQVLKAQHTQQGRGGAII
Transcript ID XM_026569076.1
Gene ID Ps.65337
Gene Name NA
Pfam domain motif EFP_N
Motif E-value 5.6e-18
Motif start 107
Motif end 161
Protein seq >XM_026569076.1
MRMKGSLTNIFRRRYRAALQDLERSTEVLKSEHKHQHTKIPHYLNIKELGLLGNSVYKGPFYRSITTLTASLQNYQTISP
NNSSLSCGTFDKPWSASQHRGVKVLGTDVRSGNVIQRKGRIYQVLKAQHTQQGRGGAIIQVELRDVDSGNKVTERFRTDE
AMERVFVEEKSFTYLYTIGESVTLMEPETYEQMEVTKDLFGKASAYLKEDMKVSLQLYDGKVMSATIPPRVTCTVAEAKG
NMKGLTVTPQYRRVLLENGLTVQAPPFIEVGDQIIVNTVDDSYVTRAKE*
CDS seq >XM_026569076.1
ATGAGGATGAAAGGGAGTTTGACTAATATCTTCAGACGAAGATATCGTGCAGCTCTTCAAGATTTAGAAAGATCAACAGA
AGTTTTAAAGTCCGAACACAAACACCAGCACACTAAGATTCCTCATTATCTGAACATAAAAGAACTTGGTTTACTGGGAA
ATTCAGTTTACAAAGGACCTTTTTACAGAAGCATCACAACTCTCACGGCATCACTACAAAATTACCAGACCATCTCACCT
AATAATAGTTCGCTTTCGTGTGGTACCTTTGACAAACCATGGTCCGCTTCCCAACACCGTGGAGTTAAAGTTTTAGGCAC
TGATGTCAGAAGCGGGAATGTCATCCAAAGGAAAGGACGTATTTATCAGGTTCTTAAAGCACAACACACACAGCAGGGAA
GAGGAGGAGCAATAATACAGGTGGAATTACGTGATGTTGACAGTGGAAACAAAGTGACCGAAAGATTTCGCACCGATGAG
GCTATGGAAAGAGTTTTTGTCGAAGAGAAATCTTTCACCTATTTGTACACCATAGGCGAGTCAGTAACACTAATGGAGCC
TGAAACATATGAACAAATGGAGGTAACGAAGGACTTGTTTGGCAAGGCTTCTGCATACCTAAAAGAGGATATGAAAGTCA
GCTTGCAATTATATGATGGTAAAGTGATGTCTGCTACTATTCCACCACGGGTGACATGTACTGTTGCTGAAGCAAAAGGC
AATATGAAGGGGCTGACTGTCACACCTCAGTATAGAAGAGTTTTGCTGGAAAATGGTCTTACAGTGCAAGCGCCTCCATT
CATTGAAGTTGGTGATCAGATAATTGTCAATACAGTCGATGACTCATATGTCACTAGGGCGAAGGAGTGA