
Microexon ID | Ps_NC_039368.1:39028757-39028770:+ |
Species | Papaver somniferum | Coordinates | NC_039368.1:39028757..39028770 |
Microexon Cluster ID | MEP36 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | EFP_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 15,31,14,48 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GACGTATTTATCAG |
Microexon Amino Acid seq | GRIYQ |
Microexon-tag DNA Seq | GTTTTAGGCACTGATGTCAGAAGCGGGAATGTCATCCAAAGGAAAGGACGTATTTATCAGGTTCTTAAAGCACAACACACACAGCAGGGAAGAGGAGGAGCAATAATA |
Microexon-tag Amino Acid Seq | VLGTDVRSGNVIQRKGRIYQVLKAQHTQQGRGGAII |
Microexon-tag spanning region | 39028048-39029037 |
Microexon-tag prediction score | 0.9472 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026569076.1x |
Reference Transcript ID | XM_026569076.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026569076.1 |
Protein ID | XP_026424861.1 |
Gene ID | LOC113321197 |
Gene Name | NA |
Pfam domain motif | EFP_N |
Motif E-value | 5.5e-18 |
Motif start | 107 |
Motif end | 161 |
Protein seq | >XP_026424861.1 MRMKGSLTNIFRRRYRAALQDLERSTEVLKSEHKHQHTKIPHYLNIKELGLLGNSVYKGPFYRSITTLTASLQNYQTISP NNSSLSCGTFDKPWSASQHRGVKVLGTDVRSGNVIQRKGRIYQVLKAQHTQQGRGGAIIQVELRDVDSGNKVTERFRTDE AMERVFVEEKSFTYLYTIGESVTLMEPETYEQMEVTKDLFGKASAYLKEDMKVSLQLYDGKVMSATIPPRVTCTVAEAKG NMKGLTVTPQYRRVLLENGLTVQAPPFIEVGDQIIVNTVDDSYVTRAKE* |
CDS seq | >XM_026569076.1 ATGAGGATGAAAGGGAGTTTGACTAATATCTTCAGACGAAGATATCGTGCAGCTCTTCAAGATTTAGAAAGATCAACAGA AGTTTTAAAGTCCGAACACAAACACCAGCACACTAAGATTCCTCATTATCTGAACATAAAAGAACTTGGTTTACTGGGAA ATTCAGTTTACAAAGGACCTTTTTACAGAAGCATCACAACTCTCACGGCATCACTACAAAATTACCAGACCATCTCACCT AATAATAGTTCGCTTTCGTGTGGTACCTTTGACAAACCATGGTCCGCTTCCCAACACCGTGGAGTTAAAGTTTTAGGCAC TGATGTCAGAAGCGGGAATGTCATCCAAAGGAAAGGACGTATTTATCAGGTTCTTAAAGCACAACACACACAGCAGGGAA GAGGAGGAGCAATAATACAGGTGGAATTACGTGATGTTGACAGTGGAAACAAAGTGACCGAAAGATTTCGCACCGATGAG GCTATGGAAAGAGTTTTTGTCGAAGAGAAATCTTTCACCTATTTGTACACCATAGGCGAGTCAGTAACACTAATGGAGCC TGAAACATATGAACAAATGGAGGTAACGAAGGACTTGTTTGGCAAGGCTTCTGCATACCTAAAAGAGGATATGAAAGTCA GCTTGCAATTATATGATGGTAAAGTGATGTCTGCTACTATTCCACCACGGGTGACATGTACTGTTGCTGAAGCAAAAGGC AATATGAAGGGGCTGACTGTCACACCTCAGTATAGAAGAGTTTTGCTGGAAAATGGTCTTACAGTGCAAGCGCCTCCATT CATTGAAGTTGGTGATCAGATAATTGTCAATACAGTCGATGACTCATATGTCACTAGGGCGAAGGAGTGA |
Microexon DNA seq | GACGTATTTATCAG |
Microexon Amino Acid seq | GRIYQ |
Microexon-tag DNA Seq | GTTTTAGGCACTGATGTCAGAAGCGGGAATGTCATCCAAAGGAAAGGACGTATTTATCAGGTTCTTAAAGCACAACACACACAGCAGGGAAGAGGAGGAGCAATAATA |
Microexon-tag Amino Acid seq | VLGTDVRSGNVIQRKGRIYQVLKAQHTQQGRGGAII |
Transcript ID | XM_026569076.1 |
Gene ID | Ps.65337 |
Gene Name | NA |
Pfam domain motif | EFP_N |
Motif E-value | 5.6e-18 |
Motif start | 107 |
Motif end | 161 |
Protein seq | >XM_026569076.1 MRMKGSLTNIFRRRYRAALQDLERSTEVLKSEHKHQHTKIPHYLNIKELGLLGNSVYKGPFYRSITTLTASLQNYQTISP NNSSLSCGTFDKPWSASQHRGVKVLGTDVRSGNVIQRKGRIYQVLKAQHTQQGRGGAIIQVELRDVDSGNKVTERFRTDE AMERVFVEEKSFTYLYTIGESVTLMEPETYEQMEVTKDLFGKASAYLKEDMKVSLQLYDGKVMSATIPPRVTCTVAEAKG NMKGLTVTPQYRRVLLENGLTVQAPPFIEVGDQIIVNTVDDSYVTRAKE* |
CDS seq | >XM_026569076.1 ATGAGGATGAAAGGGAGTTTGACTAATATCTTCAGACGAAGATATCGTGCAGCTCTTCAAGATTTAGAAAGATCAACAGA AGTTTTAAAGTCCGAACACAAACACCAGCACACTAAGATTCCTCATTATCTGAACATAAAAGAACTTGGTTTACTGGGAA ATTCAGTTTACAAAGGACCTTTTTACAGAAGCATCACAACTCTCACGGCATCACTACAAAATTACCAGACCATCTCACCT AATAATAGTTCGCTTTCGTGTGGTACCTTTGACAAACCATGGTCCGCTTCCCAACACCGTGGAGTTAAAGTTTTAGGCAC TGATGTCAGAAGCGGGAATGTCATCCAAAGGAAAGGACGTATTTATCAGGTTCTTAAAGCACAACACACACAGCAGGGAA GAGGAGGAGCAATAATACAGGTGGAATTACGTGATGTTGACAGTGGAAACAAAGTGACCGAAAGATTTCGCACCGATGAG GCTATGGAAAGAGTTTTTGTCGAAGAGAAATCTTTCACCTATTTGTACACCATAGGCGAGTCAGTAACACTAATGGAGCC TGAAACATATGAACAAATGGAGGTAACGAAGGACTTGTTTGGCAAGGCTTCTGCATACCTAAAAGAGGATATGAAAGTCA GCTTGCAATTATATGATGGTAAAGTGATGTCTGCTACTATTCCACCACGGGTGACATGTACTGTTGCTGAAGCAAAAGGC AATATGAAGGGGCTGACTGTCACACCTCAGTATAGAAGAGTTTTGCTGGAAAATGGTCTTACAGTGCAAGCGCCTCCATT CATTGAAGTTGGTGATCAGATAATTGTCAATACAGTCGATGACTCATATGTCACTAGGGCGAAGGAGTGA |