
Microexon ID | Ps_NC_039366.1:85657975-85657988:- |
Species | Papaver somniferum | Coordinates | NC_039366.1:85657975..85657988 |
Microexon Cluster ID | MEP36 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | EFP_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 15,31,14,48 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GACGTATTTATCAG |
Microexon Amino Acid seq | GRIYQ |
Microexon-tag DNA Seq | GTTTTAGGCACTGATGTCAGAAGCGGGAATGTCATCCAAAGGAAAGGACGTATTTATCAGGTTCTTAAAGCACAACACACACAGCAGGGAAGAGGAGGAGCAATAATA |
Microexon-tag Amino Acid Seq | VLGTDVRSGNVIQRKGRIYQVLKAQHTQQGRGGAII |
Microexon-tag spanning region | 85657706-85658696 |
Microexon-tag prediction score | 0.9472 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026557372.1x |
Reference Transcript ID | XM_026557372.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026557372.1 |
Protein ID | XP_026413157.1 |
Gene ID | LOC113308921 |
Gene Name | NA |
Pfam domain motif | EFP_N |
Motif E-value | 1.6e-17 |
Motif start | 212 |
Motif end | 266 |
Protein seq | >XP_026413157.1 MAKISHSGWTGKEVSTIVLAPKLCFNRRKNRRLLKKKPPCRKAAIETKTKNLRSSLIPCLTFLYGLYSISIAVQTAARPS LTHWYLRKTSLSKSVISAIETERLRMRMKGSLTNIFRRRYRAALQDLERSTEVLKSEDKHQQTKIPHYLNIKELGLLGNS VYKGPFYRSITTLTASLQNYQTISPNNSSLSRGTFDKPWSASQHRGVKVLGTDVRSGNVIQRKGRIYQVLKAQHTQQGRG GAIIQVELRDVDSGNKVTERFHTDEAMERVFVEEKSFTYLYTIGESVTLMEPETYEQMEVTKDLFGKASAYLKEDMKVSL QLYDGKVMSATIPPRVTCTVAEAKGNMKGLTATPQYRRVLLENGLTVQAPPFIEVGDQIIVNTVDDSYVTRAKE* |
CDS seq | >XM_026557372.1 ATGGCAAAAATAAGCCATAGTGGTTGGACAGGGAAGGAAGTAAGCACCATAGTTCTTGCTCCAAAACTTTGCTTTAACCG TCGTAAAAATAGAAGATTACTGAAAAAGAAACCTCCGTGCCGTAAGGCAGCCATTGAAACTAAAACTAAGAATCTCCGGT CATCCTTGATACCGTGTCTAACATTTTTATACGGACTCTACTCCATTTCCATTGCCGTGCAAACCGCTGCTCGGCCATCT CTGACTCACTGGTATCTCCGTAAAACTTCGTTGTCAAAATCTGTGATCTCGGCTATTGAGACGGAGAGATTGAGAATGAG GATGAAAGGGAGTTTGACTAATATCTTCAGACGAAGATACCGTGCAGCTCTTCAAGATTTAGAAAGATCAACAGAAGTTT TAAAGTCCGAAGACAAACACCAGCAAACTAAGATTCCTCATTATCTGAACATAAAAGAACTTGGTTTACTGGGAAATTCA GTTTACAAAGGACCTTTTTACAGAAGCATCACAACTCTCACGGCATCACTACAAAATTACCAGACCATCTCACCTAATAA TAGTTCGCTTTCGCGTGGCACCTTTGATAAACCATGGTCCGCTTCCCAACACCGTGGAGTTAAAGTTTTAGGCACTGATG TCAGAAGCGGGAATGTCATCCAAAGGAAAGGACGTATTTATCAGGTTCTTAAAGCACAACACACACAGCAGGGAAGAGGA GGAGCAATAATACAGGTGGAGTTACGTGATGTTGACAGTGGAAACAAAGTGACCGAAAGATTTCACACCGATGAGGCAAT GGAAAGAGTTTTTGTCGAAGAGAAATCTTTCACCTATTTGTACACCATAGGCGAGTCAGTAACACTAATGGAGCCCGAAA CATATGAACAAATGGAGGTAACAAAGGACTTGTTTGGCAAGGCTTCTGCATACCTAAAAGAGGATATGAAAGTCAGCTTG CAATTATATGATGGTAAAGTGATGTCTGCTACTATTCCACCACGGGTGACATGTACTGTTGCTGAAGCAAAAGGCAATAT GAAGGGGCTGACTGCCACACCTCAGTATAGAAGAGTTTTGCTGGAAAATGGTCTTACAGTGCAAGCACCTCCATTCATTG AAGTTGGTGATCAGATAATTGTCAATACAGTCGATGACTCATATGTCACTAGGGCGAAGGAGTGA |
Microexon DNA seq | GACGTATTTATCAG |
Microexon Amino Acid seq | GRIYQ |
Microexon-tag DNA Seq | GTTTTAGGCACTGATGTCAGAAGCGGGAATGTCATCCAAAGGAAAGGACGTATTTATCAGGTTCTTAAAGCACAACACACACAGCAGGGAAGAGGAGGAGCAATAATA |
Microexon-tag Amino Acid seq | VLGTDVRSGNVIQRKGRIYQVLKAQHTQQGRGGAII |
Transcript ID | XM_026557373.1 |
Gene ID | Ps.55909 |
Gene Name | NA |
Pfam domain motif | EFP_N |
Motif E-value | 9.9e-18 |
Motif start | 107 |
Motif end | 161 |
Protein seq | >XM_026557373.1 MRMKGSLTNIFRRRYRAALQDLERSTEVLKSEDKHQQTKIPHYLNIKELGLLGNSVYKGPFYRSITTLTASLQNYQTISP NNSSLSRGTFDKPWSASQHRGVKVLGTDVRSGNVIQRKGRIYQVLKAQHTQQGRGGAIIQVELRDVDSGNKVTERFHTDE AMERVFVEEKSFTYLYTIGESVTLMEPETYEQMEVTKDLFGKASAYLKEDMKVSLQLYDGKVMSATIPPRVTCTVAEAKG NMKGLTATPQYRRVLLENGLTVQAPPFIEVGDQIIVNTVDDSYVTRAKE* |
CDS seq | >XM_026557373.1 ATGAGGATGAAAGGGAGTTTGACTAATATCTTCAGACGAAGATACCGTGCAGCTCTTCAAGATTTAGAAAGATCAACAGA AGTTTTAAAGTCCGAAGACAAACACCAGCAAACTAAGATTCCTCATTATCTGAACATAAAAGAACTTGGTTTACTGGGAA ATTCAGTTTACAAAGGACCTTTTTACAGAAGCATCACAACTCTCACGGCATCACTACAAAATTACCAGACCATCTCACCT AATAATAGTTCGCTTTCGCGTGGCACCTTTGATAAACCATGGTCCGCTTCCCAACACCGTGGAGTTAAAGTTTTAGGCAC TGATGTCAGAAGCGGGAATGTCATCCAAAGGAAAGGACGTATTTATCAGGTTCTTAAAGCACAACACACACAGCAGGGAA GAGGAGGAGCAATAATACAGGTGGAGTTACGTGATGTTGACAGTGGAAACAAAGTGACCGAAAGATTTCACACCGATGAG GCAATGGAAAGAGTTTTTGTCGAAGAGAAATCTTTCACCTATTTGTACACCATAGGCGAGTCAGTAACACTAATGGAGCC CGAAACATATGAACAAATGGAGGTAACAAAGGACTTGTTTGGCAAGGCTTCTGCATACCTAAAAGAGGATATGAAAGTCA GCTTGCAATTATATGATGGTAAAGTGATGTCTGCTACTATTCCACCACGGGTGACATGTACTGTTGCTGAAGCAAAAGGC AATATGAAGGGGCTGACTGCCACACCTCAGTATAGAAGAGTTTTGCTGGAAAATGGTCTTACAGTGCAAGCACCTCCATT CATTGAAGTTGGTGATCAGATAATTGTCAATACAGTCGATGACTCATATGTCACTAGGGCGAAGGAGTGA |