Microexon ID Ps_NC_039366.1:85657975-85657988:-
Species Papaver somniferum
Coordinates NC_039366.1:85657975..85657988
Microexon Cluster ID MEP36
Size 14
Phase 1
Pfam Domain Motif EFP_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 15,31,14,48
Microexon location in the Microexon-tag 3
Microexon-tag DNA Seq KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GACGTATTTATCAG
Microexon Amino Acid seq GRIYQ
Microexon-tag DNA Seq GTTTTAGGCACTGATGTCAGAAGCGGGAATGTCATCCAAAGGAAAGGACGTATTTATCAGGTTCTTAAAGCACAACACACACAGCAGGGAAGAGGAGGAGCAATAATA
Microexon-tag Amino Acid Seq VLGTDVRSGNVIQRKGRIYQVLKAQHTQQGRGGAII
Microexon-tag spanning region85657706-85658696
Microexon-tag prediction score0.9472
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026557372.1x
Reference Transcript ID XM_026557372.1
Gene ID NA
Gene Name NA
Transcript ID XM_026557372.1
Protein ID XP_026413157.1
Gene ID LOC113308921
Gene Name NA
Pfam domain motif EFP_N
Motif E-value 1.6e-17
Motif start 212
Motif end 266
Protein seq >XP_026413157.1
MAKISHSGWTGKEVSTIVLAPKLCFNRRKNRRLLKKKPPCRKAAIETKTKNLRSSLIPCLTFLYGLYSISIAVQTAARPS
LTHWYLRKTSLSKSVISAIETERLRMRMKGSLTNIFRRRYRAALQDLERSTEVLKSEDKHQQTKIPHYLNIKELGLLGNS
VYKGPFYRSITTLTASLQNYQTISPNNSSLSRGTFDKPWSASQHRGVKVLGTDVRSGNVIQRKGRIYQVLKAQHTQQGRG
GAIIQVELRDVDSGNKVTERFHTDEAMERVFVEEKSFTYLYTIGESVTLMEPETYEQMEVTKDLFGKASAYLKEDMKVSL
QLYDGKVMSATIPPRVTCTVAEAKGNMKGLTATPQYRRVLLENGLTVQAPPFIEVGDQIIVNTVDDSYVTRAKE*
CDS seq >XM_026557372.1
ATGGCAAAAATAAGCCATAGTGGTTGGACAGGGAAGGAAGTAAGCACCATAGTTCTTGCTCCAAAACTTTGCTTTAACCG
TCGTAAAAATAGAAGATTACTGAAAAAGAAACCTCCGTGCCGTAAGGCAGCCATTGAAACTAAAACTAAGAATCTCCGGT
CATCCTTGATACCGTGTCTAACATTTTTATACGGACTCTACTCCATTTCCATTGCCGTGCAAACCGCTGCTCGGCCATCT
CTGACTCACTGGTATCTCCGTAAAACTTCGTTGTCAAAATCTGTGATCTCGGCTATTGAGACGGAGAGATTGAGAATGAG
GATGAAAGGGAGTTTGACTAATATCTTCAGACGAAGATACCGTGCAGCTCTTCAAGATTTAGAAAGATCAACAGAAGTTT
TAAAGTCCGAAGACAAACACCAGCAAACTAAGATTCCTCATTATCTGAACATAAAAGAACTTGGTTTACTGGGAAATTCA
GTTTACAAAGGACCTTTTTACAGAAGCATCACAACTCTCACGGCATCACTACAAAATTACCAGACCATCTCACCTAATAA
TAGTTCGCTTTCGCGTGGCACCTTTGATAAACCATGGTCCGCTTCCCAACACCGTGGAGTTAAAGTTTTAGGCACTGATG
TCAGAAGCGGGAATGTCATCCAAAGGAAAGGACGTATTTATCAGGTTCTTAAAGCACAACACACACAGCAGGGAAGAGGA
GGAGCAATAATACAGGTGGAGTTACGTGATGTTGACAGTGGAAACAAAGTGACCGAAAGATTTCACACCGATGAGGCAAT
GGAAAGAGTTTTTGTCGAAGAGAAATCTTTCACCTATTTGTACACCATAGGCGAGTCAGTAACACTAATGGAGCCCGAAA
CATATGAACAAATGGAGGTAACAAAGGACTTGTTTGGCAAGGCTTCTGCATACCTAAAAGAGGATATGAAAGTCAGCTTG
CAATTATATGATGGTAAAGTGATGTCTGCTACTATTCCACCACGGGTGACATGTACTGTTGCTGAAGCAAAAGGCAATAT
GAAGGGGCTGACTGCCACACCTCAGTATAGAAGAGTTTTGCTGGAAAATGGTCTTACAGTGCAAGCACCTCCATTCATTG
AAGTTGGTGATCAGATAATTGTCAATACAGTCGATGACTCATATGTCACTAGGGCGAAGGAGTGA
Microexon DNA seq GACGTATTTATCAG
Microexon Amino Acid seq GRIYQ
Microexon-tag DNA Seq GTTTTAGGCACTGATGTCAGAAGCGGGAATGTCATCCAAAGGAAAGGACGTATTTATCAGGTTCTTAAAGCACAACACACACAGCAGGGAAGAGGAGGAGCAATAATA
Microexon-tag Amino Acid seq VLGTDVRSGNVIQRKGRIYQVLKAQHTQQGRGGAII
Transcript ID XM_026557373.1
Gene ID Ps.55909
Gene Name NA
Pfam domain motif EFP_N
Motif E-value 9.9e-18
Motif start 107
Motif end 161
Protein seq >XM_026557373.1
MRMKGSLTNIFRRRYRAALQDLERSTEVLKSEDKHQQTKIPHYLNIKELGLLGNSVYKGPFYRSITTLTASLQNYQTISP
NNSSLSRGTFDKPWSASQHRGVKVLGTDVRSGNVIQRKGRIYQVLKAQHTQQGRGGAIIQVELRDVDSGNKVTERFHTDE
AMERVFVEEKSFTYLYTIGESVTLMEPETYEQMEVTKDLFGKASAYLKEDMKVSLQLYDGKVMSATIPPRVTCTVAEAKG
NMKGLTATPQYRRVLLENGLTVQAPPFIEVGDQIIVNTVDDSYVTRAKE*
CDS seq >XM_026557373.1
ATGAGGATGAAAGGGAGTTTGACTAATATCTTCAGACGAAGATACCGTGCAGCTCTTCAAGATTTAGAAAGATCAACAGA
AGTTTTAAAGTCCGAAGACAAACACCAGCAAACTAAGATTCCTCATTATCTGAACATAAAAGAACTTGGTTTACTGGGAA
ATTCAGTTTACAAAGGACCTTTTTACAGAAGCATCACAACTCTCACGGCATCACTACAAAATTACCAGACCATCTCACCT
AATAATAGTTCGCTTTCGCGTGGCACCTTTGATAAACCATGGTCCGCTTCCCAACACCGTGGAGTTAAAGTTTTAGGCAC
TGATGTCAGAAGCGGGAATGTCATCCAAAGGAAAGGACGTATTTATCAGGTTCTTAAAGCACAACACACACAGCAGGGAA
GAGGAGGAGCAATAATACAGGTGGAGTTACGTGATGTTGACAGTGGAAACAAAGTGACCGAAAGATTTCACACCGATGAG
GCAATGGAAAGAGTTTTTGTCGAAGAGAAATCTTTCACCTATTTGTACACCATAGGCGAGTCAGTAACACTAATGGAGCC
CGAAACATATGAACAAATGGAGGTAACAAAGGACTTGTTTGGCAAGGCTTCTGCATACCTAAAAGAGGATATGAAAGTCA
GCTTGCAATTATATGATGGTAAAGTGATGTCTGCTACTATTCCACCACGGGTGACATGTACTGTTGCTGAAGCAAAAGGC
AATATGAAGGGGCTGACTGCCACACCTCAGTATAGAAGAGTTTTGCTGGAAAATGGTCTTACAGTGCAAGCACCTCCATT
CATTGAAGTTGGTGATCAGATAATTGTCAATACAGTCGATGACTCATATGTCACTAGGGCGAAGGAGTGA