
Microexon ID | Os_3:33691337-33691350:- |
Species | Oryza sativa | Coordinates | 3:33691337..33691350 |
Microexon Cluster ID | MEP36 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | EFP_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 15,31,14,48 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTCGCATTTATCAG |
Microexon Amino Acid seq | GRIYQ |
Microexon-tag DNA Seq | ATGCTCGGCTCCGAAGTGAAGCTTGGAAACGTAATACAGAGAAGAGGTCGCATTTATCAGGTGATAAAAGCACAACATTCACATCAAGGTAGAGGAGGAGCCACTATA |
Microexon-tag Amino Acid Seq | MLGSEVKLGNVIQRRGRIYQVIKAQHSHQGRGGATI |
Microexon-tag spanning region | 33691170-33692059 |
Microexon-tag prediction score | 0.9544 |
Overlapped with the annotated transcript (%) | 54.82 |
New Transcript ID | Os03t0806400-01x |
Reference Transcript ID | Os03t0806400-01 |
Gene ID | Os03g0806400 |
Gene Name | NA |
Os_3:33691337-33691350:- does not have available information here.
Microexon DNA seq | GTCGCATTTATCAG |
Microexon Amino Acid seq | GRIYQ |
Microexon-tag DNA Seq | ATGCTCGGCTCCGAAGTGAAGCTTGGAAACGTAATACAGAGAAGAGGTCGCATTTATCAGGTGATAAAAGCACAACATTCACATCAAGGTAGAGGAGGAGCCACTATA |
Microexon-tag Amino Acid seq | MLGSEVKLGNVIQRRGRIYQVIKAQHSHQGRGGATI |
Transcript ID | Os.20847.2 |
Gene ID | Os.20847 |
Gene Name | NA |
Pfam domain motif | EFP_N |
Motif E-value | 8.9e-17 |
Motif start | 67 |
Motif end | 121 |
Protein seq | >Os.20847.2 MQILRRKLLEASRRLPFYFPSAPTAHYRGHAHAVATLAAVLRDQTAGSLAAAPWAAIQRRGAKMLGSEVKLGNVIQRRGR IYQVIKAQHSHQGRGGATIQVELRDVDTGNKITERFRTDEALERVFVEEKSFTYLYQEGDNVTLMEPETFEQLEVSKELF GKTAAYLKDEMKVTLQYFDGRPMSASVPPRVTCTVVEAQPHSKGITAQPQYKRVLLDNGLTVLVPPFVEAGEKIVVSTAD DSYMTRA* |
CDS seq | >Os.20847.2 ATGCAGATCCTCCGGCGGAAACTTCTGGAAGCTTCCCGCCGCCTCCCCTTCTACTTCCCCTCCGCGCCCACCGCCCACTA CCGCGGCCACGCCCATGCCGTCGCCACCCTCGCCGCCGTCCTGCGGGACCAGACCGCCGGCTCCCTCGCCGCCGCCCCGT GGGCCGCCATCCAGCGCCGCGGCGCGAAGATGCTCGGCTCCGAAGTGAAGCTTGGAAACGTAATACAGAGAAGAGGTCGC ATTTATCAGGTGATAAAAGCACAACATTCACATCAAGGTAGAGGAGGAGCCACTATACAGGTGGAATTGAGGGATGTTGA CACTGGCAACAAAATAACTGAAAGATTTCGTACCGATGAGGCTCTTGAGAGAGTTTTTGTTGAGGAGAAGTCATTCACAT ATCTTTATCAGGAAGGAGACAATGTGACTCTTATGGAGCCTGAAACGTTTGAGCAACTTGAGGTCTCAAAGGAACTGTTT GGCAAAACTGCAGCATATCTGAAAGATGAAATGAAGGTGACTCTGCAGTACTTTGATGGCCGACCTATGTCTGCATCAGT GCCTCCACGCGTGACTTGCACGGTTGTTGAAGCACAACCTCATTCAAAAGGGATAACTGCACAGCCTCAATATAAAAGGG TATTGCTGGATAATGGTCTTACAGTGCTTGTACCACCCTTTGTAGAAGCCGGTGAGAAAATTGTTGTTAGTACTGCAGAT GATTCATATATGACGAGGGCCTGA |