Microexon ID Os_3:33691337-33691350:-
Species Oryza sativa
Coordinates 3:33691337..33691350
Microexon Cluster ID MEP36
Size 14
Phase 1
Pfam Domain Motif EFP_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 15,31,14,48
Microexon location in the Microexon-tag 3
Microexon-tag DNA Seq KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTCGCATTTATCAG
Microexon Amino Acid seq GRIYQ
Microexon-tag DNA Seq ATGCTCGGCTCCGAAGTGAAGCTTGGAAACGTAATACAGAGAAGAGGTCGCATTTATCAGGTGATAAAAGCACAACATTCACATCAAGGTAGAGGAGGAGCCACTATA
Microexon-tag Amino Acid Seq MLGSEVKLGNVIQRRGRIYQVIKAQHSHQGRGGATI
Microexon-tag spanning region33691170-33692059
Microexon-tag prediction score0.9544
Overlapped with the annotated transcript (%) 54.82
New Transcript ID Os03t0806400-01x
Reference Transcript ID Os03t0806400-01
Gene ID Os03g0806400
Gene Name NA
Os_3:33691337-33691350:- does not have available information here.
Microexon DNA seq GTCGCATTTATCAG
Microexon Amino Acid seq GRIYQ
Microexon-tag DNA Seq ATGCTCGGCTCCGAAGTGAAGCTTGGAAACGTAATACAGAGAAGAGGTCGCATTTATCAGGTGATAAAAGCACAACATTCACATCAAGGTAGAGGAGGAGCCACTATA
Microexon-tag Amino Acid seq MLGSEVKLGNVIQRRGRIYQVIKAQHSHQGRGGATI
Transcript ID Os.20847.2
Gene ID Os.20847
Gene Name NA
Pfam domain motif EFP_N
Motif E-value 8.9e-17
Motif start 67
Motif end 121
Protein seq >Os.20847.2
MQILRRKLLEASRRLPFYFPSAPTAHYRGHAHAVATLAAVLRDQTAGSLAAAPWAAIQRRGAKMLGSEVKLGNVIQRRGR
IYQVIKAQHSHQGRGGATIQVELRDVDTGNKITERFRTDEALERVFVEEKSFTYLYQEGDNVTLMEPETFEQLEVSKELF
GKTAAYLKDEMKVTLQYFDGRPMSASVPPRVTCTVVEAQPHSKGITAQPQYKRVLLDNGLTVLVPPFVEAGEKIVVSTAD
DSYMTRA*
CDS seq >Os.20847.2
ATGCAGATCCTCCGGCGGAAACTTCTGGAAGCTTCCCGCCGCCTCCCCTTCTACTTCCCCTCCGCGCCCACCGCCCACTA
CCGCGGCCACGCCCATGCCGTCGCCACCCTCGCCGCCGTCCTGCGGGACCAGACCGCCGGCTCCCTCGCCGCCGCCCCGT
GGGCCGCCATCCAGCGCCGCGGCGCGAAGATGCTCGGCTCCGAAGTGAAGCTTGGAAACGTAATACAGAGAAGAGGTCGC
ATTTATCAGGTGATAAAAGCACAACATTCACATCAAGGTAGAGGAGGAGCCACTATACAGGTGGAATTGAGGGATGTTGA
CACTGGCAACAAAATAACTGAAAGATTTCGTACCGATGAGGCTCTTGAGAGAGTTTTTGTTGAGGAGAAGTCATTCACAT
ATCTTTATCAGGAAGGAGACAATGTGACTCTTATGGAGCCTGAAACGTTTGAGCAACTTGAGGTCTCAAAGGAACTGTTT
GGCAAAACTGCAGCATATCTGAAAGATGAAATGAAGGTGACTCTGCAGTACTTTGATGGCCGACCTATGTCTGCATCAGT
GCCTCCACGCGTGACTTGCACGGTTGTTGAAGCACAACCTCATTCAAAAGGGATAACTGCACAGCCTCAATATAAAAGGG
TATTGCTGGATAATGGTCTTACAGTGCTTGTACCACCCTTTGTAGAAGCCGGTGAGAAAATTGTTGTTAGTACTGCAGAT
GATTCATATATGACGAGGGCCTGA