Microexon ID Ha_1:123324777-123324790:-
Species Helianthus annuus
Coordinates 1:123324777..123324790
Microexon Cluster ID MEP36
Size 14
Phase 1
Pfam Domain Motif EFP_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 15,31,14,48
Microexon location in the Microexon-tag 3
Microexon-tag DNA Seq KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAAAAGTTTACCAG
Microexon Amino Acid seq GKVYQ
Microexon-tag DNA Seq GCTCGCGGCTCCGATGTGAGACCAGGAAATGTCATTGAAAGAAAAGGAAAAGTTTACCAGGTTGTAAAAGCACAACACTCAACTCAAGGAAGAGGAGGTGCTATTATA
Microexon-tag Amino Acid Seq ARGSDVRPGNVIERKGKVYQVVKAQHSTQGRGGAII
Microexon-tag spanning region123324630-123326015
Microexon-tag prediction score0.9785
Overlapped with the annotated transcript (%) 100
New Transcript ID OTG37670x
Reference Transcript ID OTG37670
Gene ID HannXRQ_Chr01g0021361
Gene Name NA
Transcript ID OTG37670
Protein ID OTG37670
Gene ID HannXRQ_Chr01g0021361
Gene Name NA
Pfam domain motif EFP_N
Motif E-value 2.1e-20
Motif start 79
Motif end 135
Protein seq >OTG37670
MRAIIGAAVAAEHKLTRLAKTLYSSSTRNYSITISTHNTTTIIQSEPSIFSADRCRHPSHQLLSVPWSANQIRFAKARGS
DVRPGNVIERKGKVYQVVKAQHSTQGRGGAIIQVELRDVDSGNKVNERFRTDETVEKIFVEAKSYTYLYTDEETDTIVLM
EPNTFVQLDVPKHLFGNSLAYLKDDITVSVELFNDRPMSASVPKRVTCTVVEAQVPMKGMGATPHTKKVLLDNGLRVEVP
PHVVTGDKILIDTTNDSYISRA*
CDS seq >OTG37670
ATGAGAGCCATCATCGGCGCCGCCGTAGCAGCGGAACATAAACTTACTCGTCTTGCCAAAACACTTTACTCTTCTTCAAC
TCGTAACTACTCTATAACCATCTCCACACACAACACCACCACAATAATTCAATCTGAGCCGTCGATTTTCTCCGCCGATC
GTTGCCGCCATCCGTCTCACCAACTTCTCTCTGTCCCGTGGTCCGCCAATCAGATCCGGTTCGCCAAAGCTCGCGGCTCC
GATGTGAGACCAGGAAATGTCATTGAAAGAAAAGGAAAAGTTTACCAGGTTGTAAAAGCACAACACTCAACTCAAGGAAG
AGGAGGTGCTATTATACAGGTAGAGCTTCGTGATGTTGATAGTGGAAACAAAGTGAATGAAAGGTTTCGCACAGACGAAA
CTGTTGAAAAAATATTTGTTGAAGCCAAATCTTACACTTATCTATACACTGATGAAGAAACTGATACGATTGTGCTAATG
GAGCCTAACACTTTCGTACAACTGGATGTACCCAAGCACCTATTTGGAAACTCTCTTGCATATTTAAAAGACGATATCAC
CGTCTCTGTGGAGCTTTTTAATGATAGGCCTATGTCAGCATCGGTACCTAAACGAGTTACATGTACTGTGGTGGAAGCAC
AAGTCCCCATGAAGGGCATGGGAGCTACCCCTCATACCAAAAAGGTATTACTGGACAATGGCCTTAGAGTAGAGGTACCG
CCACATGTTGTAACAGGTGATAAGATACTCATTGACACCACCAACGACTCGTACATAAGCAGGGCTTGA
Microexon DNA seq GAAAAGTTTACCAG
Microexon Amino Acid seq GKVYQ
Microexon-tag DNA Seq GCTCGCGGCTCCGATGTGAGACCAGGAAATGTCATTGAAAGAAAAGGAAAAGTTTACCAGGTTGTAAAAGCACAACACTCAACTCAAGGAAGAGGAGGTGCTATTATA
Microexon-tag Amino Acid seq ARGSDVRPGNVIERKGKVYQVVKAQHSTQGRGGAII
Transcript ID OTG37670
Gene ID Ha.2239
Gene Name NA
Pfam domain motif EFP_N
Motif E-value 2.1e-20
Motif start 79
Motif end 135
Protein seq >OTG37670
MRAIIGAAVAAEHKLTRLAKTLYSSSTRNYSITISTHNTTTIIQSEPSIFSADRCRHPSHQLLSVPWSANQIRFAKARGS
DVRPGNVIERKGKVYQVVKAQHSTQGRGGAIIQVELRDVDSGNKVNERFRTDETVEKIFVEAKSYTYLYTDEETDTIVLM
EPNTFVQLDVPKHLFGNSLAYLKDDITVSVELFNDRPMSASVPKRVTCTVVEAQVPMKGMGATPHTKKVLLDNGLRVEVP
PHVVTGDKILIDTTNDSYISRA*
CDS seq >OTG37670
ATGAGAGCCATCATCGGCGCCGCCGTAGCAGCGGAACATAAACTTACTCGTCTTGCCAAAACACTTTACTCTTCTTCAAC
TCGTAACTACTCTATAACCATCTCCACACACAACACCACCACAATAATTCAATCTGAGCCGTCGATTTTCTCCGCCGATC
GTTGCCGCCATCCGTCTCACCAACTTCTCTCTGTCCCGTGGTCCGCCAATCAGATCCGGTTCGCCAAAGCTCGCGGCTCC
GATGTGAGACCAGGAAATGTCATTGAAAGAAAAGGAAAAGTTTACCAGGTTGTAAAAGCACAACACTCAACTCAAGGAAG
AGGAGGTGCTATTATACAGGTAGAGCTTCGTGATGTTGATAGTGGAAACAAAGTGAATGAAAGGTTTCGCACAGACGAAA
CTGTTGAAAAAATATTTGTTGAAGCCAAATCTTACACTTATCTATACACTGATGAAGAAACTGATACGATTGTGCTAATG
GAGCCTAACACTTTCGTACAACTGGATGTACCCAAGCACCTATTTGGAAACTCTCTTGCATATTTAAAAGACGATATCAC
CGTCTCTGTGGAGCTTTTTAATGATAGGCCTATGTCAGCATCGGTACCTAAACGAGTTACATGTACTGTGGTGGAAGCAC
AAGTCCCCATGAAGGGCATGGGAGCTACCCCTCATACCAAAAAGGTATTACTGGACAATGGCCTTAGAGTAGAGGTACCG
CCACATGTTGTAACAGGTGATAAGATACTCATTGACACCACCAACGACTCGTACATAAGCAGGGCTTGA