
Microexon ID | Ha_1:123324777-123324790:- |
Species | Helianthus annuus | Coordinates | 1:123324777..123324790 |
Microexon Cluster ID | MEP36 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | EFP_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 15,31,14,48 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAAAAGTTTACCAG |
Microexon Amino Acid seq | GKVYQ |
Microexon-tag DNA Seq | GCTCGCGGCTCCGATGTGAGACCAGGAAATGTCATTGAAAGAAAAGGAAAAGTTTACCAGGTTGTAAAAGCACAACACTCAACTCAAGGAAGAGGAGGTGCTATTATA |
Microexon-tag Amino Acid Seq | ARGSDVRPGNVIERKGKVYQVVKAQHSTQGRGGAII |
Microexon-tag spanning region | 123324630-123326015 |
Microexon-tag prediction score | 0.9785 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG37670x |
Reference Transcript ID | OTG37670 |
Gene ID | HannXRQ_Chr01g0021361 |
Gene Name | NA |
Transcript ID | OTG37670 |
Protein ID | OTG37670 |
Gene ID | HannXRQ_Chr01g0021361 |
Gene Name | NA |
Pfam domain motif | EFP_N |
Motif E-value | 2.1e-20 |
Motif start | 79 |
Motif end | 135 |
Protein seq | >OTG37670 MRAIIGAAVAAEHKLTRLAKTLYSSSTRNYSITISTHNTTTIIQSEPSIFSADRCRHPSHQLLSVPWSANQIRFAKARGS DVRPGNVIERKGKVYQVVKAQHSTQGRGGAIIQVELRDVDSGNKVNERFRTDETVEKIFVEAKSYTYLYTDEETDTIVLM EPNTFVQLDVPKHLFGNSLAYLKDDITVSVELFNDRPMSASVPKRVTCTVVEAQVPMKGMGATPHTKKVLLDNGLRVEVP PHVVTGDKILIDTTNDSYISRA* |
CDS seq | >OTG37670 ATGAGAGCCATCATCGGCGCCGCCGTAGCAGCGGAACATAAACTTACTCGTCTTGCCAAAACACTTTACTCTTCTTCAAC TCGTAACTACTCTATAACCATCTCCACACACAACACCACCACAATAATTCAATCTGAGCCGTCGATTTTCTCCGCCGATC GTTGCCGCCATCCGTCTCACCAACTTCTCTCTGTCCCGTGGTCCGCCAATCAGATCCGGTTCGCCAAAGCTCGCGGCTCC GATGTGAGACCAGGAAATGTCATTGAAAGAAAAGGAAAAGTTTACCAGGTTGTAAAAGCACAACACTCAACTCAAGGAAG AGGAGGTGCTATTATACAGGTAGAGCTTCGTGATGTTGATAGTGGAAACAAAGTGAATGAAAGGTTTCGCACAGACGAAA CTGTTGAAAAAATATTTGTTGAAGCCAAATCTTACACTTATCTATACACTGATGAAGAAACTGATACGATTGTGCTAATG GAGCCTAACACTTTCGTACAACTGGATGTACCCAAGCACCTATTTGGAAACTCTCTTGCATATTTAAAAGACGATATCAC CGTCTCTGTGGAGCTTTTTAATGATAGGCCTATGTCAGCATCGGTACCTAAACGAGTTACATGTACTGTGGTGGAAGCAC AAGTCCCCATGAAGGGCATGGGAGCTACCCCTCATACCAAAAAGGTATTACTGGACAATGGCCTTAGAGTAGAGGTACCG CCACATGTTGTAACAGGTGATAAGATACTCATTGACACCACCAACGACTCGTACATAAGCAGGGCTTGA |
Microexon DNA seq | GAAAAGTTTACCAG |
Microexon Amino Acid seq | GKVYQ |
Microexon-tag DNA Seq | GCTCGCGGCTCCGATGTGAGACCAGGAAATGTCATTGAAAGAAAAGGAAAAGTTTACCAGGTTGTAAAAGCACAACACTCAACTCAAGGAAGAGGAGGTGCTATTATA |
Microexon-tag Amino Acid seq | ARGSDVRPGNVIERKGKVYQVVKAQHSTQGRGGAII |
Transcript ID | OTG37670 |
Gene ID | Ha.2239 |
Gene Name | NA |
Pfam domain motif | EFP_N |
Motif E-value | 2.1e-20 |
Motif start | 79 |
Motif end | 135 |
Protein seq | >OTG37670 MRAIIGAAVAAEHKLTRLAKTLYSSSTRNYSITISTHNTTTIIQSEPSIFSADRCRHPSHQLLSVPWSANQIRFAKARGS DVRPGNVIERKGKVYQVVKAQHSTQGRGGAIIQVELRDVDSGNKVNERFRTDETVEKIFVEAKSYTYLYTDEETDTIVLM EPNTFVQLDVPKHLFGNSLAYLKDDITVSVELFNDRPMSASVPKRVTCTVVEAQVPMKGMGATPHTKKVLLDNGLRVEVP PHVVTGDKILIDTTNDSYISRA* |
CDS seq | >OTG37670 ATGAGAGCCATCATCGGCGCCGCCGTAGCAGCGGAACATAAACTTACTCGTCTTGCCAAAACACTTTACTCTTCTTCAAC TCGTAACTACTCTATAACCATCTCCACACACAACACCACCACAATAATTCAATCTGAGCCGTCGATTTTCTCCGCCGATC GTTGCCGCCATCCGTCTCACCAACTTCTCTCTGTCCCGTGGTCCGCCAATCAGATCCGGTTCGCCAAAGCTCGCGGCTCC GATGTGAGACCAGGAAATGTCATTGAAAGAAAAGGAAAAGTTTACCAGGTTGTAAAAGCACAACACTCAACTCAAGGAAG AGGAGGTGCTATTATACAGGTAGAGCTTCGTGATGTTGATAGTGGAAACAAAGTGAATGAAAGGTTTCGCACAGACGAAA CTGTTGAAAAAATATTTGTTGAAGCCAAATCTTACACTTATCTATACACTGATGAAGAAACTGATACGATTGTGCTAATG GAGCCTAACACTTTCGTACAACTGGATGTACCCAAGCACCTATTTGGAAACTCTCTTGCATATTTAAAAGACGATATCAC CGTCTCTGTGGAGCTTTTTAATGATAGGCCTATGTCAGCATCGGTACCTAAACGAGTTACATGTACTGTGGTGGAAGCAC AAGTCCCCATGAAGGGCATGGGAGCTACCCCTCATACCAAAAAGGTATTACTGGACAATGGCCTTAGAGTAGAGGTACCG CCACATGTTGTAACAGGTGATAAGATACTCATTGACACCACCAACGACTCGTACATAAGCAGGGCTTGA |