Microexon ID Gm_4:44236327-44236340:-
Species Glycine max
Coordinates 4:44236327..44236340
Microexon Cluster ID MEP36
Size 14
Phase 1
Pfam Domain Motif EFP_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 15,31,14,48
Microexon location in the Microexon-tag 3
Microexon-tag DNA Seq KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GACGCGCTCACGAG
Microexon Amino Acid seq GRAHE
Microexon-tag DNA Seq CTTTCCGGATCTGATATTAGAGTCGGGAATCTCATTGGAAACCGAGGACGCGCTCACGAGGTTCTCAAACTGTATCGCCCTCTTGAAGGAACGGGCAAAGCCACTCTT
Microexon-tag Amino Acid Seq LSGSDIRVGNLIGNRGRAHEVLKLYRPLEGTGKATL
Microexon-tag spanning region44236182-44236643
Microexon-tag prediction score0.8567
Overlapped with the annotated transcript (%) 100
New Transcript ID KRH63458x
Reference Transcript ID KRH63458
Gene ID GLYMA_04G178000
Gene Name NA
Transcript ID KRH63458
Protein ID KRH63458
Gene ID GLYMA_04G178000
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >KRH63458
MQSMSLTLSKRLSNSKPLFRISSSLVAHASSATTSPPPPSPPVPSPSALNSLLTAPWSATQSRGITLSGSDIRVGNLIGN
RGRAHEVLKLYRPLEGTGKATLEVPPQSVAGYATVATTEDGAERKERNSGLSKATKTKREQLLKATAVASLLLIYPNTYS
LLFANFFVFWHLYAGIGEILADYVHHEMTREFVMISLRLFLIIALKDVCLNFVFV*
CDS seq >KRH63458
ATGCAATCTATGTCCCTGACGCTGAGCAAGAGGCTCTCCAATTCAAAGCCTCTCTTCAGAATCTCTTCCAGCCTCGTCGC
TCACGCATCCTCCGCCACAACCTCTCCGCCGCCACCTTCGCCGCCAGTCCCCTCTCCCTCCGCCCTCAACAGCCTCCTCA
CCGCTCCGTGGTCCGCCACTCAGTCACGCGGAATCACGCTTTCCGGATCTGATATTAGAGTCGGGAATCTCATTGGAAAC
CGAGGACGCGCTCACGAGGTTCTCAAACTGTATCGCCCTCTTGAAGGAACGGGCAAAGCCACTCTTGAGGTTCCGCCTCA
AAGTGTAGCTGGTTATGCCACAGTTGCTACTACAGAGGATGGTGCCGAAAGGAAGGAACGAAACAGTGGATTGAGTAAGG
CAACGAAGACAAAGAGAGAGCAGCTCCTAAAAGCTACTGCAGTTGCCTCTCTTCTTCTAATATACCCGAACACTTATTCA
TTGCTCTTCGCAAATTTCTTTGTGTTCTGGCACTTATATGCAGGGATCGGAGAGATTTTGGCAGACTATGTTCACCATGA
AATGACCAGAGAATTTGTCATGATTTCTCTCAGGTTGTTCTTGATAATCGCATTGAAGGATGTTTGCTTAAATTTTGTAT
TTGTATAA
Microexon DNA seq GACGCGCTCACGAG
Microexon Amino Acid seq GRAHE
Microexon-tag DNA Seq CTCTCTGGATCTGATGTTCGAGTCGGGAATCTCATTGGAAACCGAGGACGCGCTCACGAGGTTCTCAAACTGTATCGCCCTCTTGAAGGAACGGGCAAAGCCACTCTT
Microexon-tag Amino Acid seq LSGSDVRVGNLIGNRGRAHEVLKLYRPLEGTGKATL
Transcript ID Gm.39043.1
Gene ID Gm.39043
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Gm.39043.1
MQSMSLTLSKRLSNSKPLFRISSNLVAHASSATTSPPPPSPPVPSPSALNSLLTAPWSATQSRGITLSGSDVRVGNLIGN
RGRAHEVLKLYRPLEGTGKATLEVPPQSVAGYATVATTEDGAERKERNSGLSKATKTKREQLLKATAVASLLLIYPNTYS
LLFANFFVFWHLYAGIGEILADYVHHEMTREFVMISLRLFLIIALKDVCLNFVFV*
CDS seq >Gm.39043.1
ATGCAATCTATGTCCCTGACGCTGAGCAAGAGGCTCTCCAATTCAAAGCCTCTCTTCAGAATCTCTTCCAACCTCGTCGC
TCACGCATCCTCCGCCACAACCTCTCCGCCGCCACCTTCGCCGCCAGTCCCCTCTCCATCCGCCCTCAACAGCCTCCTCA
CCGCTCCGTGGTCCGCCACTCAGTCACGCGGAATCACGCTCTCTGGATCTGATGTTCGAGTCGGGAATCTCATTGGAAAC
CGAGGACGCGCTCACGAGGTTCTCAAACTGTATCGCCCTCTTGAAGGAACGGGCAAAGCCACTCTTGAGGTTCCGCCTCA
AAGTGTAGCTGGTTATGCCACAGTTGCTACTACAGAGGATGGTGCCGAAAGGAAGGAACGAAACAGTGGATTGAGTAAGG
CAACGAAGACAAAGAGAGAGCAGCTCCTAAAAGCTACTGCAGTTGCCTCTCTTCTTCTAATATACCCGAACACTTATTCA
TTGCTCTTCGCAAATTTCTTTGTGTTCTGGCACTTATATGCAGGGATCGGAGAGATTTTGGCAGACTATGTTCACCATGA
AATGACCAGAGAATTTGTCATGATTTCTCTCAGGTTGTTCTTGATAATCGCATTGAAGGATGTTTGCTTAAATTTTGTAT
TTGTATAA