
Microexon ID | Gm_4:44236327-44236340:- |
Species | Glycine max | Coordinates | 4:44236327..44236340 |
Microexon Cluster ID | MEP36 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | EFP_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 15,31,14,48 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GACGCGCTCACGAG |
Microexon Amino Acid seq | GRAHE |
Microexon-tag DNA Seq | CTTTCCGGATCTGATATTAGAGTCGGGAATCTCATTGGAAACCGAGGACGCGCTCACGAGGTTCTCAAACTGTATCGCCCTCTTGAAGGAACGGGCAAAGCCACTCTT |
Microexon-tag Amino Acid Seq | LSGSDIRVGNLIGNRGRAHEVLKLYRPLEGTGKATL |
Microexon-tag spanning region | 44236182-44236643 |
Microexon-tag prediction score | 0.8567 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH63458x |
Reference Transcript ID | KRH63458 |
Gene ID | GLYMA_04G178000 |
Gene Name | NA |
Transcript ID | KRH63458 |
Protein ID | KRH63458 |
Gene ID | GLYMA_04G178000 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >KRH63458 MQSMSLTLSKRLSNSKPLFRISSSLVAHASSATTSPPPPSPPVPSPSALNSLLTAPWSATQSRGITLSGSDIRVGNLIGN RGRAHEVLKLYRPLEGTGKATLEVPPQSVAGYATVATTEDGAERKERNSGLSKATKTKREQLLKATAVASLLLIYPNTYS LLFANFFVFWHLYAGIGEILADYVHHEMTREFVMISLRLFLIIALKDVCLNFVFV* |
CDS seq | >KRH63458 ATGCAATCTATGTCCCTGACGCTGAGCAAGAGGCTCTCCAATTCAAAGCCTCTCTTCAGAATCTCTTCCAGCCTCGTCGC TCACGCATCCTCCGCCACAACCTCTCCGCCGCCACCTTCGCCGCCAGTCCCCTCTCCCTCCGCCCTCAACAGCCTCCTCA CCGCTCCGTGGTCCGCCACTCAGTCACGCGGAATCACGCTTTCCGGATCTGATATTAGAGTCGGGAATCTCATTGGAAAC CGAGGACGCGCTCACGAGGTTCTCAAACTGTATCGCCCTCTTGAAGGAACGGGCAAAGCCACTCTTGAGGTTCCGCCTCA AAGTGTAGCTGGTTATGCCACAGTTGCTACTACAGAGGATGGTGCCGAAAGGAAGGAACGAAACAGTGGATTGAGTAAGG CAACGAAGACAAAGAGAGAGCAGCTCCTAAAAGCTACTGCAGTTGCCTCTCTTCTTCTAATATACCCGAACACTTATTCA TTGCTCTTCGCAAATTTCTTTGTGTTCTGGCACTTATATGCAGGGATCGGAGAGATTTTGGCAGACTATGTTCACCATGA AATGACCAGAGAATTTGTCATGATTTCTCTCAGGTTGTTCTTGATAATCGCATTGAAGGATGTTTGCTTAAATTTTGTAT TTGTATAA |
Microexon DNA seq | GACGCGCTCACGAG |
Microexon Amino Acid seq | GRAHE |
Microexon-tag DNA Seq | CTCTCTGGATCTGATGTTCGAGTCGGGAATCTCATTGGAAACCGAGGACGCGCTCACGAGGTTCTCAAACTGTATCGCCCTCTTGAAGGAACGGGCAAAGCCACTCTT |
Microexon-tag Amino Acid seq | LSGSDVRVGNLIGNRGRAHEVLKLYRPLEGTGKATL |
Transcript ID | Gm.39043.1 |
Gene ID | Gm.39043 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Gm.39043.1 MQSMSLTLSKRLSNSKPLFRISSNLVAHASSATTSPPPPSPPVPSPSALNSLLTAPWSATQSRGITLSGSDVRVGNLIGN RGRAHEVLKLYRPLEGTGKATLEVPPQSVAGYATVATTEDGAERKERNSGLSKATKTKREQLLKATAVASLLLIYPNTYS LLFANFFVFWHLYAGIGEILADYVHHEMTREFVMISLRLFLIIALKDVCLNFVFV* |
CDS seq | >Gm.39043.1 ATGCAATCTATGTCCCTGACGCTGAGCAAGAGGCTCTCCAATTCAAAGCCTCTCTTCAGAATCTCTTCCAACCTCGTCGC TCACGCATCCTCCGCCACAACCTCTCCGCCGCCACCTTCGCCGCCAGTCCCCTCTCCATCCGCCCTCAACAGCCTCCTCA CCGCTCCGTGGTCCGCCACTCAGTCACGCGGAATCACGCTCTCTGGATCTGATGTTCGAGTCGGGAATCTCATTGGAAAC CGAGGACGCGCTCACGAGGTTCTCAAACTGTATCGCCCTCTTGAAGGAACGGGCAAAGCCACTCTTGAGGTTCCGCCTCA AAGTGTAGCTGGTTATGCCACAGTTGCTACTACAGAGGATGGTGCCGAAAGGAAGGAACGAAACAGTGGATTGAGTAAGG CAACGAAGACAAAGAGAGAGCAGCTCCTAAAAGCTACTGCAGTTGCCTCTCTTCTTCTAATATACCCGAACACTTATTCA TTGCTCTTCGCAAATTTCTTTGTGTTCTGGCACTTATATGCAGGGATCGGAGAGATTTTGGCAGACTATGTTCACCATGA AATGACCAGAGAATTTGTCATGATTTCTCTCAGGTTGTTCTTGATAATCGCATTGAAGGATGTTTGCTTAAATTTTGTAT TTGTATAA |