
Microexon ID | Gm_4:15772746-15772759:- |
Species | Glycine max | Coordinates | 4:15772746..15772759 |
Microexon Cluster ID | MEP36 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | EFP_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 15,31,14,48 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGCACTTTTACGAG |
Microexon Amino Acid seq | GHFYE |
Microexon-tag DNA Seq | GTATCTGGTTCTGATATTAAAGTCGGAAATATCATTGGAAAACAAGGGCACTTTTACGAGGTTCTTAAAGTAGATCACTCTCATGAAGGAAGAGGAAAAGCCACAATC |
Microexon-tag Amino Acid Seq | VSGSDIKVGNIIGKQGHFYEVLKVDHSHEGRGKATI |
Microexon-tag spanning region | 15772616-15773045 |
Microexon-tag prediction score | 0.9129 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH62663x |
Reference Transcript ID | KRH62663 |
Gene ID | GLYMA_04G122600 |
Gene Name | NA |
Transcript ID | KRH62663 |
Protein ID | KRH62663 |
Gene ID | GLYMA_04G122600 |
Gene Name | NA |
Pfam domain motif | EFP_N |
Motif E-value | 1.6e-11 |
Motif start | 66 |
Motif end | 122 |
Protein seq | >KRH62663 MQALLLRHRLSNSNTKSLFRLSSYFHSSSCSPRPFIPSPPSASSIATNLFTSPWSASQCRGIKVSGSDIKVGNIIGKQGH FYEVLKVDHSHEGRGKATIKVELRDIDQGNKVTQRMGTDEDVERVYVQEKTFMFMCMDSDGTVVLMDPDTLDQIEVSKDL FNKDCLYLRDEMKVKVHFYDDKPLSASVPKRVTCIVKEAIAATSRNKKVVLDNGLTVEVPSHIVAGDAIVVSTEHDSYIE RAKA* |
CDS seq | >KRH62663 ATGCAAGCTCTGTTGCTGAGGCATAGGCTTTCCAATTCCAACACCAAGTCTCTTTTCAGACTTTCATCCTATTTTCATTC TTCCTCTTGTTCTCCGCGACCATTCATTCCGTCACCACCTTCTGCTTCCTCCATCGCTACCAACTTGTTCACCTCTCCAT GGTCTGCCTCTCAATGTCGCGGAATCAAAGTATCTGGTTCTGATATTAAAGTCGGAAATATCATTGGAAAACAAGGGCAC TTTTACGAGGTTCTTAAAGTAGATCACTCTCATGAAGGAAGAGGAAAAGCCACAATCAAGGTAGAACTTCGTGACATTGA CCAGGGAAACAAGGTAACACAAAGAATGGGTACCGATGAGGATGTTGAAAGGGTCTACGTTCAGGAAAAGACTTTCATGT TTATGTGCATGGATAGTGATGGAACTGTTGTATTGATGGACCCTGACACATTGGATCAAATTGAAGTTTCCAAGGACTTG TTCAACAAGGATTGCTTATATCTACGAGATGAAATGAAAGTTAAGGTACATTTTTATGACGACAAACCTTTATCTGCATC AGTTCCAAAACGCGTAACGTGTATTGTCAAGGAAGCCATTGCAGCCACTTCGAGGAATAAAAAGGTAGTACTGGACAATG GCCTTACAGTTGAAGTACCATCTCACATTGTAGCTGGTGATGCCATAGTTGTTAGTACAGAGCATGACTCCTATATAGAA AGGGCCAAAGCATAG |
Microexon DNA seq | GGCACTTTTACGAG |
Microexon Amino Acid seq | GHFYE |
Microexon-tag DNA Seq | GTATCTGGTTCTGATATTAAAGTCGGAAATATCATTGGAAAACAAGGGCACTTTTACGAGGTTCTTAAAGTAGATCACTCTCATGAAGGAAGAGGAAAAGCCACAATC |
Microexon-tag Amino Acid seq | VSGSDIKVGNIIGKQGHFYEVLKVDHSHEGRGKATI |
Transcript ID | KRH62663 |
Gene ID | Gm.38573 |
Gene Name | NA |
Pfam domain motif | EFP_N |
Motif E-value | 1.6e-11 |
Motif start | 66 |
Motif end | 122 |
Protein seq | >KRH62663 MQALLLRHRLSNSNTKSLFRLSSYFHSSSCSPRPFIPSPPSASSIATNLFTSPWSASQCRGIKVSGSDIKVGNIIGKQGH FYEVLKVDHSHEGRGKATIKVELRDIDQGNKVTQRMGTDEDVERVYVQEKTFMFMCMDSDGTVVLMDPDTLDQIEVSKDL FNKDCLYLRDEMKVKVHFYDDKPLSASVPKRVTCIVKEAIAATSRNKKVVLDNGLTVEVPSHIVAGDAIVVSTEHDSYIE RAKA* |
CDS seq | >KRH62663 ATGCAAGCTCTGTTGCTGAGGCATAGGCTTTCCAATTCCAACACCAAGTCTCTTTTCAGACTTTCATCCTATTTTCATTC TTCCTCTTGTTCTCCGCGACCATTCATTCCGTCACCACCTTCTGCTTCCTCCATCGCTACCAACTTGTTCACCTCTCCAT GGTCTGCCTCTCAATGTCGCGGAATCAAAGTATCTGGTTCTGATATTAAAGTCGGAAATATCATTGGAAAACAAGGGCAC TTTTACGAGGTTCTTAAAGTAGATCACTCTCATGAAGGAAGAGGAAAAGCCACAATCAAGGTAGAACTTCGTGACATTGA CCAGGGAAACAAGGTAACACAAAGAATGGGTACCGATGAGGATGTTGAAAGGGTCTACGTTCAGGAAAAGACTTTCATGT TTATGTGCATGGATAGTGATGGAACTGTTGTATTGATGGACCCTGACACATTGGATCAAATTGAAGTTTCCAAGGACTTG TTCAACAAGGATTGCTTATATCTACGAGATGAAATGAAAGTTAAGGTACATTTTTATGACGACAAACCTTTATCTGCATC AGTTCCAAAACGCGTAACGTGTATTGTCAAGGAAGCCATTGCAGCCACTTCGAGGAATAAAAAGGTAGTACTGGACAATG GCCTTACAGTTGAAGTACCATCTCACATTGTAGCTGGTGATGCCATAGTTGTTAGTACAGAGCATGACTCCTATATAGAA AGGGCCAAAGCATAG |