| Microexon ID | Bn_scaffoldC05:49594488-49594501:- |
| Species | Brassica Napus | Coordinates | scaffoldC05:49594488..49594501 |
| Microexon Cluster ID | MEP36 |
| Size | 14 |
| Phase | 1 |
| Pfam Domain Motif | EFP_N |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 15,31,14,48 |
| Microexon location in the Microexon-tag | 3 |
| Microexon-tag DNA Seq | KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | GACGTACTTTCCGG |
| Microexon Amino Acid seq | GRTFR |
| Microexon-tag DNA Seq | GTTAACGCCATTCAGTTAAGGCCAGGGAACGTTATTGAACGAACAGGACGTACTTTCCGGGTTGTAGAATCAGAGCATAAACAACAAGGCAGAGGAGGAGCCTCCATA |
| Microexon-tag Amino Acid Seq | VNAIQLRPGNVIERTGRTFRVVESEHKQQGRGGASI |
| Microexon-tag spanning region | 49594344-49594740 |
| Microexon-tag prediction score | 0.9333 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC05T0444200ZSx |
| Reference Transcript ID | BnaC05T0444200ZS |
| Gene ID | BnaC05G0444200ZS |
| Gene Name | NA |
| Transcript ID | BnaC05T0444200ZS |
| Protein ID | |
| Gene ID | BnaC05G0444200ZS |
| Gene Name | |
| Pfam domain motif | EFP_N |
| Motif E-value | 1.60E-14 |
| Motif start | 55 |
| Motif end | 111 |
| Protein seq | >BnaC05T0444200ZS MRGISSRSLYSLSRSLLSRVSHGITVATSGGCSGETRALGSLWSALQSRGVKVNAIQLRPGNVIERTGRTFRVVESEHKQ QGRGGASIQVELRDVDNGSKLNLRFGPEESVEKVFVQEKSFTCLYTEGDTAFLIEPDTFEQVEVPLDIFGKAAVYLKEEM RVQLQLYDGRALSASVPKHVTCTIQETQLPMKGLTSAPRYKRALLDNGSTIQVPSYLEAGEKIVINTEDDSFVKSEATLR RRFDLFSPPRRDLAISVASVREHSTLLGFSAVKFVICFSEFDIWSVKRIAEWRPCKWWLHGHLTPLPAKSNGFIRVDCFG GLNQMRRDVSVLDQCFLLSHKAIIDHVTLLQLCDGVGIARLLNATLVLPKFEVAAYWNESSGFGDVFDVDYFIQKMNGFI KVVKDLPTDISSKEPFRVDCSKRKGQFDYRETILPLLLEHHYISLTPAMSQRRDRYMIFLSHTIESYTFSFSAFAWLRFR YPQYAKATLCQACYSALRLTTSLEKKALELLDAIPKPFLSLHLRFEPDMVAYSRCEYPNLSPSSLAAIKAAGGEDKKPWT GEIAQSWRKRGKCPLTPNETALMLQSLRIPTSTNIYLAAGDGLMEMEGFTSVYTQVFTKSALLNREDFTRMHGNTKAALD YYVSINSDAYVATYFGNMDKMVAAMRAYNGMHKTLFLSRKAFAELSSQGLEEEELKKALWEVHRNDFEIGRGSALPDCFC EFKL* |
| CDS seq | >BnaC05T0444200ZS ATGCGAGGGATCTCGAGTAGATCGCTTTATTCTTTGAGCCGATCGCTGTTATCACGCGTAAGTCACGGGATCACAGTGGC GACATCAGGTGGATGCTCCGGGGAAACTCGTGCGCTTGGTTCACTGTGGTCTGCTCTTCAAAGCCGCGGCGTTAAAGTTA ACGCCATTCAGTTAAGGCCAGGGAACGTTATTGAACGAACAGGACGTACTTTCCGGGTTGTAGAATCAGAGCATAAACAA CAAGGCAGAGGAGGAGCCTCCATACAGGTAGAGCTTCGAGATGTTGACAACGGGAGCAAACTTAACCTGCGGTTTGGACC TGAGGAGTCCGTTGAAAAGGTTTTTGTTCAGGAGAAATCGTTCACATGTTTATATACAGAGGGAGATACTGCATTCCTGA TTGAGCCCGATACGTTTGAGCAAGTTGAGGTGCCATTGGACATATTTGGCAAAGCTGCTGTATATTTAAAAGAGGAAATG AGAGTCCAGTTGCAGCTGTATGATGGAAGAGCTTTATCTGCATCTGTCCCTAAGCATGTCACATGCACGATCCAAGAAAC TCAACTACCAATGAAAGGCTTAACCTCAGCTCCTCGTTACAAGAGGGCTCTCCTGGATAATGGTTCTACTATTCAAGTAC CATCTTATCTGGAGGCAGGTGAAAAGATTGTGATAAACACCGAGGATGATTCTTTTGTCAAGAGTGAAGCCACTCTTCGT CGTCGTTTTGACCTTTTCTCTCCTCCTCGCCGTGATCTTGCTATCTCCGTCGCCTCAGTTCGTGAACACTCCACTCTCCT CGGCTTCTCTGCTGTAAAGTTTGTCATTTGCTTCAGTGAGTTTGATATATGGAGTGTCAAGAGGATAGCAGAGTGGCGTC CTTGCAAATGGTGGTTACATGGGCATCTCACCCCTCTACCTGCTAAAAGCAATGGATTCATTCGCGTTGATTGCTTTGGT GGCCTCAATCAGATGCGACGCGATGTAAGTGTTTTGGACCAATGTTTCTTACTGTCTCATAAAGCAATCATTGATCATGT GACGCTCTTACAGTTGTGTGATGGTGTTGGAATCGCTCGTCTATTAAATGCCACGCTTGTTTTACCCAAATTTGAGGTAG CTGCCTATTGGAATGAGTCAAGTGGATTTGGAGATGTGTTTGATGTAGACTACTTCATTCAAAAGATGAATGGCTTTATC AAAGTTGTCAAGGATCTTCCCACAGATATATCATCAAAAGAGCCATTCAGAGTAGACTGCAGCAAAAGGAAAGGTCAATT CGATTACAGAGAAACCATTCTCCCACTATTATTGGAACATCATTACATCTCTCTAACACCCGCAATGAGCCAGCGCAGAG ACAGGTACATGATTTTTTTGTCACACACTATAGAATCTTATACTTTCTCATTCTCAGCATTTGCGTGGTTACGTTTCAGG TACCCCCAATACGCAAAAGCCACGCTCTGTCAAGCTTGTTACTCAGCTCTACGCCTCACTACCTCCTTGGAGAAGAAAGC CCTCGAGCTTCTAGATGCCATACCCAAACCTTTCTTGTCACTTCACCTCAGATTTGAGCCTGACATGGTAGCATACAGCA GATGCGAATACCCGAACCTATCCCCTTCCTCACTTGCTGCTATTAAAGCTGCCGGAGGAGAAGACAAAAAACCATGGACA GGAGAGATAGCTCAGAGCTGGAGAAAGCGAGGCAAGTGTCCTCTGACTCCTAACGAAACAGCGTTGATGCTTCAGTCACT AAGGATCCCAACGAGCACAAACATATACTTAGCAGCGGGAGACGGTCTGATGGAGATGGAAGGTTTCACATCCGTTTACA CACAAGTGTTCACCAAGTCTGCTCTGCTAAACCGTGAAGATTTCACAAGAATGCATGGGAACACAAAAGCTGCGTTGGAT TATTATGTTTCCATCAACAGCGACGCCTATGTAGCTACTTACTTTGGGAACATGGATAAGATGGTTGCAGCTATGCGAGC TTATAATGGGATGCATAAGACTCTGTTCTTGAGTAGAAAGGCGTTTGCGGAGCTGAGTTCTCAGGGACTTGAAGAGGAAG AGCTGAAGAAAGCTCTTTGGGAGGTTCATAGGAATGATTTTGAAATTGGCAGAGGATCTGCATTGCCTGACTGTTTCTGT GAGTTCAAGCTGTAA |
Bn_scaffoldC05:49594488-49594501:- does not have available information here.