
Microexon ID | At_4:13315563-13315576:- |
Species | Arabidopsis thaliana | Coordinates | 4:13315563..13315576 |
Microexon Cluster ID | MEP36 |
Size | 14 |
Phase | 1 |
Pfam Domain Motif | EFP_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 15,31,14,48 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGCGTACTTTTCGG |
Microexon Amino Acid seq | GRTFR |
Microexon-tag DNA Seq | GCTGTAGGTACTGATCTAAGGGCAGGAAATGTAATTGAGCGAACAGGGCGTACTTTTCGGGTTGTAGAAGCAGAGCATAAGCAACAAGGTAGAGGAGGAGCTTCCATA |
Microexon-tag Amino Acid Seq | AVGTDLRAGNVIERTGRTFRVVEAEHKQQGRGGASI |
Microexon-tag spanning region | 13315423-13325528 |
Microexon-tag prediction score | 0.9216 |
Overlapped with the annotated transcript (%) | 18.2 |
New Transcript ID | AT4G26310.2x |
Reference Transcript ID | AT4G26310.2 |
Gene ID | AT4G26310 |
Gene Name | NA |
Transcript ID | AT4G26310.1 |
Protein ID | AT4G26310.1 |
Gene ID | AT4G26310 |
Gene Name | NA |
Pfam domain motif | EFP_N |
Motif E-value | 1.5e-15 |
Motif start | 75 |
Motif end | 131 |
Protein seq | >AT4G26310.1 MRGLHHFKRISISRSLFSFSNATSPGAVTTRRSLYSLSRSLLSSTPYAAGGCCRETPPLHSPWSALQRRGVKVNAIQLRA GNVIERTGRTFRVVEAEHKQQGRGGASIQVELRDVDTGNKLNLRFGSEESVEKVFVEEKSFTCLYAEGDTAYLIEPNTFE QVEVPLDIFGKAAVYLKEEMKVQLQLYDGRALSASIPKHITCTVVETQLPMKGLTSAPRYKRALLDNGSTIQVPSYLEAG EKIVINTEDDSFVKRDNK* |
CDS seq | >AT4G26310.1 ATGAGAGGGCTGCACCATTTCAAGAGAATCTCAATCTCTCGATCTCTCTTCTCCTTCTCTAATGCCACTTCTCCTGGGGC AGTAACGACTAGGAGGTCTCTTTATTCTTTGAGCAGGTCGTTGTTGTCATCAACCCCGTACGCCGCCGGTGGATGCTGCC GAGAAACGCCTCCGCTTCATTCTCCGTGGTCTGCTCTGCAACGCCGCGGTGTTAAGGTTAACGCGATTCAGCTAAGGGCA GGAAATGTAATTGAGCGAACAGGGCGTACTTTTCGGGTTGTAGAAGCAGAGCATAAGCAACAAGGTAGAGGAGGAGCTTC CATACAGGTTGAGCTTCGTGATGTTGACACTGGGAATAAGCTTAACTTGCGTTTTGGATCTGAGGAGTCGGTTGAGAAAG TTTTTGTTGAAGAGAAATCTTTCACGTGTTTGTATGCAGAGGGAGATACTGCATATCTGATTGAGCCTAATACGTTTGAG CAAGTTGAAGTGCCATTGGACATATTTGGAAAAGCTGCTGTATATTTAAAAGAGGAAATGAAAGTTCAGTTGCAGCTGTA TGATGGAAGAGCTTTATCTGCATCTATCCCTAAGCATATCACATGCACAGTTGTAGAAACACAACTTCCAATGAAAGGCC TAACATCAGCTCCTCGGTACAAGAGAGCTCTCCTGGATAATGGTTCCACTATTCAGGTACCATCTTATCTCGAGGCAGGT GAAAAGATTGTGATAAACACTGAGGATGACTCTTTTGTTAAGAGGGACAACAAATGA |
Microexon DNA seq | GGCGTACTTTTCGG |
Microexon Amino Acid seq | GRTFR |
Microexon-tag DNA Seq | GTTAACGCGATTCAGCTAAGGGCAGGAAATGTAATTGAGCGAACAGGGCGTACTTTTCGGGTTGTAGAAGCAGAGCATAAGCAACAAGGTAGAGGAGGAGCTTCCATA |
Microexon-tag Amino Acid seq | VNAIQLRAGNVIERTGRTFRVVEAEHKQQGRGGASI |
Transcript ID | AT4G26310.1 |
Gene ID | At.20086 |
Gene Name | NA |
Pfam domain motif | EFP_N |
Motif E-value | 1.6e-15 |
Motif start | 75 |
Motif end | 131 |
Protein seq | >AT4G26310.1 MRGLHHFKRISISRSLFSFSNATSPGAVTTRRSLYSLSRSLLSSTPYAAGGCCRETPPLHSPWSALQRRGVKVNAIQLRA GNVIERTGRTFRVVEAEHKQQGRGGASIQVELRDVDTGNKLNLRFGSEESVEKVFVEEKSFTCLYAEGDTAYLIEPNTFE QVEVPLDIFGKAAVYLKEEMKVQLQLYDGRALSASIPKHITCTVVETQLPMKGLTSAPRYKRALLDNGSTIQVPSYLEAG EKIVINTEDDSFVKRDNK* |
CDS seq | >AT4G26310.1 ATGAGAGGGCTGCACCATTTCAAGAGAATCTCAATCTCTCGATCTCTCTTCTCCTTCTCTAATGCCACTTCTCCTGGGGC AGTAACGACTAGGAGGTCTCTTTATTCTTTGAGCAGGTCGTTGTTGTCATCAACCCCGTACGCCGCCGGTGGATGCTGCC GAGAAACGCCTCCGCTTCATTCTCCGTGGTCTGCTCTGCAACGCCGCGGTGTTAAGGTTAACGCGATTCAGCTAAGGGCA GGAAATGTAATTGAGCGAACAGGGCGTACTTTTCGGGTTGTAGAAGCAGAGCATAAGCAACAAGGTAGAGGAGGAGCTTC CATACAGGTTGAGCTTCGTGATGTTGACACTGGGAATAAGCTTAACTTGCGTTTTGGATCTGAGGAGTCGGTTGAGAAAG TTTTTGTTGAAGAGAAATCTTTCACGTGTTTGTATGCAGAGGGAGATACTGCATATCTGATTGAGCCTAATACGTTTGAG CAAGTTGAAGTGCCATTGGACATATTTGGAAAAGCTGCTGTATATTTAAAAGAGGAAATGAAAGTTCAGTTGCAGCTGTA TGATGGAAGAGCTTTATCTGCATCTATCCCTAAGCATATCACATGCACAGTTGTAGAAACACAACTTCCAATGAAAGGCC TAACATCAGCTCCTCGGTACAAGAGAGCTCTCCTGGATAATGGTTCCACTATTCAGGTACCATCTTATCTCGAGGCAGGT GAAAAGATTGTGATAAACACTGAGGATGACTCTTTTGTTAAGAGGGACAACAAATGA |