Microexon ID At_4:13315563-13315576:-
Species Arabidopsis thaliana
Coordinates 4:13315563..13315576
Microexon Cluster ID MEP36
Size 14
Phase 1
Pfam Domain Motif EFP_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 15,31,14,48
Microexon location in the Microexon-tag 3
Microexon-tag DNA Seq KTYYGCGGCTCYGATGTGARRCYWGGRAAYGTCATTGAAARAAAAGGAMRBATTTAYSAGGTKRTAAARGCASAACAYWCWMMTCAAGGAAGAGGAGGAGCYAYWATA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGCGTACTTTTCGG
Microexon Amino Acid seq GRTFR
Microexon-tag DNA Seq GCTGTAGGTACTGATCTAAGGGCAGGAAATGTAATTGAGCGAACAGGGCGTACTTTTCGGGTTGTAGAAGCAGAGCATAAGCAACAAGGTAGAGGAGGAGCTTCCATA
Microexon-tag Amino Acid Seq AVGTDLRAGNVIERTGRTFRVVEAEHKQQGRGGASI
Microexon-tag spanning region13315423-13325528
Microexon-tag prediction score0.9216
Overlapped with the annotated transcript (%) 18.2
New Transcript ID AT4G26310.2x
Reference Transcript ID AT4G26310.2
Gene ID AT4G26310
Gene Name NA
Transcript ID AT4G26310.1
Protein ID AT4G26310.1
Gene ID AT4G26310
Gene Name NA
Pfam domain motif EFP_N
Motif E-value 1.5e-15
Motif start 75
Motif end 131
Protein seq >AT4G26310.1
MRGLHHFKRISISRSLFSFSNATSPGAVTTRRSLYSLSRSLLSSTPYAAGGCCRETPPLHSPWSALQRRGVKVNAIQLRA
GNVIERTGRTFRVVEAEHKQQGRGGASIQVELRDVDTGNKLNLRFGSEESVEKVFVEEKSFTCLYAEGDTAYLIEPNTFE
QVEVPLDIFGKAAVYLKEEMKVQLQLYDGRALSASIPKHITCTVVETQLPMKGLTSAPRYKRALLDNGSTIQVPSYLEAG
EKIVINTEDDSFVKRDNK*
CDS seq >AT4G26310.1
ATGAGAGGGCTGCACCATTTCAAGAGAATCTCAATCTCTCGATCTCTCTTCTCCTTCTCTAATGCCACTTCTCCTGGGGC
AGTAACGACTAGGAGGTCTCTTTATTCTTTGAGCAGGTCGTTGTTGTCATCAACCCCGTACGCCGCCGGTGGATGCTGCC
GAGAAACGCCTCCGCTTCATTCTCCGTGGTCTGCTCTGCAACGCCGCGGTGTTAAGGTTAACGCGATTCAGCTAAGGGCA
GGAAATGTAATTGAGCGAACAGGGCGTACTTTTCGGGTTGTAGAAGCAGAGCATAAGCAACAAGGTAGAGGAGGAGCTTC
CATACAGGTTGAGCTTCGTGATGTTGACACTGGGAATAAGCTTAACTTGCGTTTTGGATCTGAGGAGTCGGTTGAGAAAG
TTTTTGTTGAAGAGAAATCTTTCACGTGTTTGTATGCAGAGGGAGATACTGCATATCTGATTGAGCCTAATACGTTTGAG
CAAGTTGAAGTGCCATTGGACATATTTGGAAAAGCTGCTGTATATTTAAAAGAGGAAATGAAAGTTCAGTTGCAGCTGTA
TGATGGAAGAGCTTTATCTGCATCTATCCCTAAGCATATCACATGCACAGTTGTAGAAACACAACTTCCAATGAAAGGCC
TAACATCAGCTCCTCGGTACAAGAGAGCTCTCCTGGATAATGGTTCCACTATTCAGGTACCATCTTATCTCGAGGCAGGT
GAAAAGATTGTGATAAACACTGAGGATGACTCTTTTGTTAAGAGGGACAACAAATGA
Microexon DNA seq GGCGTACTTTTCGG
Microexon Amino Acid seq GRTFR
Microexon-tag DNA Seq GTTAACGCGATTCAGCTAAGGGCAGGAAATGTAATTGAGCGAACAGGGCGTACTTTTCGGGTTGTAGAAGCAGAGCATAAGCAACAAGGTAGAGGAGGAGCTTCCATA
Microexon-tag Amino Acid seq VNAIQLRAGNVIERTGRTFRVVEAEHKQQGRGGASI
Transcript ID AT4G26310.1
Gene ID At.20086
Gene Name NA
Pfam domain motif EFP_N
Motif E-value 1.6e-15
Motif start 75
Motif end 131
Protein seq >AT4G26310.1
MRGLHHFKRISISRSLFSFSNATSPGAVTTRRSLYSLSRSLLSSTPYAAGGCCRETPPLHSPWSALQRRGVKVNAIQLRA
GNVIERTGRTFRVVEAEHKQQGRGGASIQVELRDVDTGNKLNLRFGSEESVEKVFVEEKSFTCLYAEGDTAYLIEPNTFE
QVEVPLDIFGKAAVYLKEEMKVQLQLYDGRALSASIPKHITCTVVETQLPMKGLTSAPRYKRALLDNGSTIQVPSYLEAG
EKIVINTEDDSFVKRDNK*
CDS seq >AT4G26310.1
ATGAGAGGGCTGCACCATTTCAAGAGAATCTCAATCTCTCGATCTCTCTTCTCCTTCTCTAATGCCACTTCTCCTGGGGC
AGTAACGACTAGGAGGTCTCTTTATTCTTTGAGCAGGTCGTTGTTGTCATCAACCCCGTACGCCGCCGGTGGATGCTGCC
GAGAAACGCCTCCGCTTCATTCTCCGTGGTCTGCTCTGCAACGCCGCGGTGTTAAGGTTAACGCGATTCAGCTAAGGGCA
GGAAATGTAATTGAGCGAACAGGGCGTACTTTTCGGGTTGTAGAAGCAGAGCATAAGCAACAAGGTAGAGGAGGAGCTTC
CATACAGGTTGAGCTTCGTGATGTTGACACTGGGAATAAGCTTAACTTGCGTTTTGGATCTGAGGAGTCGGTTGAGAAAG
TTTTTGTTGAAGAGAAATCTTTCACGTGTTTGTATGCAGAGGGAGATACTGCATATCTGATTGAGCCTAATACGTTTGAG
CAAGTTGAAGTGCCATTGGACATATTTGGAAAAGCTGCTGTATATTTAAAAGAGGAAATGAAAGTTCAGTTGCAGCTGTA
TGATGGAAGAGCTTTATCTGCATCTATCCCTAAGCATATCACATGCACAGTTGTAGAAACACAACTTCCAATGAAAGGCC
TAACATCAGCTCCTCGGTACAAGAGAGCTCTCCTGGATAATGGTTCCACTATTCAGGTACCATCTTATCTCGAGGCAGGT
GAAAAGATTGTGATAAACACTGAGGATGACTCTTTTGTTAAGAGGGACAACAAATGA