Microexon ID Zm_5:132599863-132599876:+
Species Zea mays
Coordinates 5:132599863..132599876
Microexon Cluster ID MEP35
Size 14
Phase 0
Pfam Domain Motif Tudor-knot
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGTTGGAATAAGAA
Microexon Amino Acid seq GWNKN
Microexon-tag DNA Seq AGGATCGAAAACCATGAAGATGAATGGCGCTACTTTGTCCATTATCTCGGTTGGAATAAGAACTGGGATGAATGGGTTGCAAATGACCGCTTGTTGGAATTGACGGAG
Microexon-tag Amino Acid Seq RIENHEDEWRYFVHYLGWNKNWDEWVANDRLLELTE
Microexon-tag spanning region132599655-132602484
Microexon-tag prediction score0.9117
Overlapped with the annotated transcript (%) 57.41
New Transcript ID Zm00001d015932_T002x
Reference Transcript ID Zm00001d015932_T002
Gene ID Zm00001d015932
Gene Name NA
Transcript ID Zm00001d015932_T001
Protein ID Zm00001d015932_P001
Gene ID Zm00001d015932
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Zm00001d015932_P001
MGSSSNTNTSGGASDKEEKKKEDKIKGKDSSGPSFKENERVLAYHGPLLYEAKVQRIENHEDEWRYFVHYLVSLRVGIRT
DAKADKDDTKSLISVKGKKRKSQLGTEIQDKEKRSSHSLLVLQFPLPLKKQLVDDWEFVTQMGKLVKLPRSPTVDDILKK
YLEHRAKKDGKINDSYAEILKGLRCYFDKALPAMLLYKKERDQYAEEVKGDVSPSTVYGAEHLLRLFVKLPELLASVNME
EDALNKLQLKLLDVLKFLQKNQITFFTSAYDGSCKGADEDKTK*
CDS seq >Zm00001d015932_T001
ATGGGCAGCTCCTCGAATACCAACACGAGCGGCGGGGCCAGCGACAAGGAGGAGAAGAAGAAGGAGGACAAGATCAAAGG
CAAGGACTCGTCGGGGCCATCCTTCAAGGAGAACGAAAGGGTCCTCGCCTACCACGGCCCCCTCCTCTACGAGGCCAAGG
TTCAAAGGATCGAAAACCATGAAGATGAATGGCGCTACTTTGTCCATTATCTCGTAAGTCTTAGGGTTGGAATAAGAACG
GATGCAAAAGCTGATAAAGATGACACTAAGAGTCTCATTTCAGTGAAGGGGAAGAAACGTAAAAGTCAGCTTGGGACTGA
GATTCAGGACAAGGAAAAAAGATCATCACATAGTCTACTAGTGTTGCAGTTTCCTTTGCCACTGAAGAAGCAACTTGTGG
ATGATTGGGAGTTTGTTACGCAGATGGGTAAGCTTGTGAAGCTACCACGATCACCTACTGTTGATGATATTCTAAAGAAG
TACTTGGAACACCGGGCAAAGAAGGATGGCAAGATAAATGACTCCTATGCTGAGATTCTGAAAGGATTACGCTGCTACTT
TGATAAAGCATTGCCTGCAATGCTTTTATATAAGAAAGAGCGAGATCAGTATGCTGAAGAAGTTAAAGGTGATGTCTCAC
CATCAACTGTATATGGAGCTGAGCATCTATTGCGCCTTTTTGTAAAATTGCCAGAGCTACTTGCTTCTGTCAATATGGAG
GAAGATGCGTTGAACAAGCTACAGCTGAAACTGCTGGACGTTCTCAAGTTTCTTCAGAAGAATCAGATCACCTTCTTTAC
CTCTGCGTACGATGGTTCTTGTAAAGGTGCAGATGAGGATAAAACCAAATGA
Microexon DNA seq GGTTGGAATAAGAA
Microexon Amino Acid seq RVGIRT
Microexon-tag DNA Seq CATGAAGATGAATGGCGCTACTTTGTCCATTATCTCGTAAGTCTTAGGGTTGGAATAAGAACGGATGCAAAAGCTGATAAAGATGACACTAAGAGTCTCATTTCAGTG
Microexon-tag Amino Acid seq HEDEWRYFVHYLVSLRVGIRTDAKADKDDTKSLISV
Transcript ID Zm00001d015932_T001
Gene ID Zm.23979
Gene Name NA
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Zm00001d015932_T001
MGSSSNTNTSGGASDKEEKKKEDKIKGKDSSGPSFKENERVLAYHGPLLYEAKVQRIENHEDEWRYFVHYLVSLRVGIRT
DAKADKDDTKSLISVKGKKRKSQLGTEIQDKEKRSSHSLLVLQFPLPLKKQLVDDWEFVTQMGKLVKLPRSPTVDDILKK
YLEHRAKKDGKINDSYAEILKGLRCYFDKALPAMLLYKKERDQYAEEVKGDVSPSTVYGAEHLLRLFVKLPELLASVNME
EDALNKLQLKLLDVLKFLQKNQITFFTSAYDGSCKGADEDKTK*
CDS seq >Zm00001d015932_T001
ATGGGCAGCTCCTCGAATACCAACACGAGCGGCGGGGCCAGCGACAAGGAGGAGAAGAAGAAGGAGGACAAGATCAAAGG
CAAGGACTCGTCGGGGCCATCCTTCAAGGAGAACGAAAGGGTCCTCGCCTACCACGGCCCCCTCCTCTACGAGGCCAAGG
TTCAAAGGATCGAAAACCATGAAGATGAATGGCGCTACTTTGTCCATTATCTCGTAAGTCTTAGGGTTGGAATAAGAACG
GATGCAAAAGCTGATAAAGATGACACTAAGAGTCTCATTTCAGTGAAGGGGAAGAAACGTAAAAGTCAGCTTGGGACTGA
GATTCAGGACAAGGAAAAAAGATCATCACATAGTCTACTAGTGTTGCAGTTTCCTTTGCCACTGAAGAAGCAACTTGTGG
ATGATTGGGAGTTTGTTACGCAGATGGGTAAGCTTGTGAAGCTACCACGATCACCTACTGTTGATGATATTCTAAAGAAG
TACTTGGAACACCGGGCAAAGAAGGATGGCAAGATAAATGACTCCTATGCTGAGATTCTGAAAGGATTACGCTGCTACTT
TGATAAAGCATTGCCTGCAATGCTTTTATATAAGAAAGAGCGAGATCAGTATGCTGAAGAAGTTAAAGGTGATGTCTCAC
CATCAACTGTATATGGAGCTGAGCATCTATTGCGCCTTTTTGTAAAATTGCCAGAGCTACTTGCTTCTGTCAATATGGAG
GAAGATGCGTTGAACAAGCTACAGCTGAAACTGCTGGACGTTCTCAAGTTTCTTCAGAAGAATCAGATCACCTTCTTTAC
CTCTGCGTACGATGGTTCTTGTAAAGGTGCAGATGAGGATAAAACCAAATGA