Microexon ID Vv_18:8101012-8101025:+
Species Vistis vinifera
Coordinates 18:8101012..8101025
Microexon Cluster ID MEP35
Size 14
Phase 0
Pfam Domain Motif Tudor-knot
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGTTGGAGCAAAAA
Microexon Amino Acid seq GWSKN
Microexon-tag DNA Seq AGAATTGAATTTCAGATGAATGAATGGAAGTATTTTGTTCATTACCTTGGTTGGAGCAAAAACTGGGATGAATGGGTGGGCATGGATCGGCTGCTGAAATTTAGTGAA
Microexon-tag Amino Acid Seq RIEFQMNEWKYFVHYLGWSKNWDEWVGMDRLLKFSE
Microexon-tag spanning region8100803-8101730
Microexon-tag prediction score0.9527
Overlapped with the annotated transcript (%) 100
New Transcript ID VIT_18s0001g09710.t01x
Reference Transcript ID VIT_18s0001g09710.t01
Gene ID VIT_18s0001g09710
Gene Name NA
Transcript ID VIT_18s0001g09710.t01
Protein ID VIT_18s0001g09710.t01
Gene ID VIT_18s0001g09710
Gene Name NA
Pfam domain motif Tudor-knot
Motif E-value 3e-09
Motif start 42
Motif end 92
Protein seq >VIT_18s0001g09710.t01
MGSSVDASATETDGDTTETDIDVDADSDTDDYPPLSDSCPFSEGEKVLAYHNLRIYPAKVRRIEFQMNEWKYFVHYLGWS
KNWDEWVGMDRLLKFSEENVQKQKALGKKQGIDKNTKPVRASQIKPKNFARGKKWKNDCVTKEAIPVEKLVNIQIPPTLK
KQLVDDCEFITHLGQLIRLPRAPTVDKILKKYLDYRIKRDGMISDSAGEILKGLRCYFDKALPVMLLYERERQQYQEAIA
NNVSPSTIYGAEHLLRLFVKLPELLFHANIEKETSKELQMELLDFLKFLQKNQSAFFLTSYISSA*
CDS seq >VIT_18s0001g09710.t01
ATGGGAAGCTCTGTCGATGCCTCCGCAACCGAAACCGACGGCGACACCACCGAAACCGACATCGACGTCGACGCCGACAG
CGACACCGATGACTACCCTCCCCTTTCCGATTCGTGTCCCTTTTCTGAAGGAGAGAAGGTCCTCGCTTATCATAACCTTC
GTATTTATCCAGCCAAGGTGCGAAGAATTGAATTTCAGATGAATGAATGGAAGTATTTTGTTCATTACCTTGGTTGGAGC
AAAAACTGGGATGAATGGGTGGGCATGGATCGGCTGCTGAAATTTAGTGAAGAGAATGTCCAAAAACAGAAGGCCCTGGG
AAAAAAACAGGGCATAGACAAAAACACAAAGCCAGTGCGTGCCTCACAGATTAAGCCAAAAAATTTTGCAAGAGGCAAGA
AGTGGAAGAATGACTGTGTCACTAAGGAAGCTATACCAGTGGAGAAGCTTGTGAACATCCAAATTCCTCCAACACTGAAG
AAGCAACTAGTTGATGATTGTGAATTCATTACTCATCTGGGCCAGCTTATTAGACTGCCTCGAGCTCCAACTGTTGACAA
AATATTGAAGAAGTATCTTGATTACAGGATAAAGAGGGATGGCATGATATCTGATTCGGCTGGAGAAATTCTGAAAGGGT
TACGTTGTTACTTTGACAAAGCATTGCCAGTGATGCTTCTGTATGAAAGGGAGCGTCAACAGTATCAAGAAGCAATTGCA
AATAATGTCTCTCCTTCAACTATATATGGTGCTGAACATCTATTACGCCTCTTTGTTAAATTGCCCGAGTTATTATTCCA
TGCCAACATTGAAAAGGAGACATCAAAAGAGTTACAAATGGAATTACTCGACTTTCTCAAGTTCCTGCAGAAGAATCAGA
GTGCCTTCTTCCTCACCTCATATATTTCTTCCGCATGA
Microexon DNA seq GGTTGGAGCAAAAA
Microexon Amino Acid seq GWSKN
Microexon-tag DNA Seq AGAATTGAATTTCAGATGAATGAATGGAAGTATTTTGTTCATTACCTTGGTTGGAGCAAAAACTGGGATGAATGGGTGGGCATGGATCGGCTGCTGAAATTTAGTGAA
Microexon-tag Amino Acid seq RIEFQMNEWKYFVHYLGWSKNWDEWVGMDRLLKFSE
Transcript ID Vv.15856.1
Gene ID Vv.15856
Gene Name NA
Pfam domain motif Tudor-knot
Motif E-value 3e-09
Motif start 42
Motif end 92
Protein seq >Vv.15856.1
MGSSVDASATETDGDTTETDIDVDADSDTDDYPPLSDSCPFSEGEKVLAYHNLRIYPAKVRRIEFQMNEWKYFVHYLGWS
KNWDEWVGMDRLLKFSEENVQKQKALGKKQGIDKNTKPVRASQIKPKNFARGKKWKNDCVTKKEAIPVEKLVNIQIPPTL
KKQLVDDCEFITHLGQLIRLPRAPTVDKILKKYLDYRIKRDGMISDSAGEILKGLRCYFDKALPVMLLYERERQQYQEAI
ANNVSPSTIYGAEHLLRLFVKLPELLFHANIEKETSKELQMELLDFLKFLQKNQSAFFLTSYISSA*
CDS seq >Vv.15856.1
ATGGGAAGCTCTGTCGATGCCTCCGCAACCGAAACCGACGGCGACACCACCGAAACCGACATCGACGTCGACGCCGACAG
CGACACCGATGACTACCCTCCCCTTTCCGATTCGTGTCCCTTTTCTGAAGGAGAGAAGGTCCTCGCTTATCATAACCTTC
GTATTTATCCAGCCAAGGTGCGAAGAATTGAATTTCAGATGAATGAATGGAAGTATTTTGTTCATTACCTTGGTTGGAGC
AAAAACTGGGATGAATGGGTGGGCATGGATCGGCTGCTGAAATTTAGTGAAGAGAATGTCCAAAAACAGAAGGCCCTGGG
AAAAAAACAGGGCATAGACAAAAACACAAAGCCAGTGCGTGCCTCACAGATTAAGCCAAAAAATTTTGCAAGAGGCAAGA
AGTGGAAGAATGACTGTGTCACTAAGAAGGAAGCTATACCAGTGGAGAAGCTTGTGAACATCCAAATTCCTCCAACACTG
AAGAAGCAACTAGTTGATGATTGTGAATTCATTACTCATCTGGGCCAGCTTATTAGACTGCCTCGAGCTCCAACTGTTGA
CAAAATATTGAAGAAGTATCTTGATTACAGGATAAAGAGGGATGGCATGATATCTGATTCGGCTGGAGAAATTCTGAAAG
GGTTACGTTGTTACTTTGACAAAGCATTGCCAGTGATGCTTCTGTATGAAAGGGAGCGTCAACAGTATCAAGAAGCAATT
GCAAATAATGTCTCTCCTTCAACTATATATGGTGCTGAACATCTATTACGCCTCTTTGTTAAATTGCCCGAGTTATTATT
CCATGCCAACATTGAAAAGGAGACATCAAAAGAGTTACAAATGGAATTACTCGACTTTCTCAAGTTCCTGCAGAAGAATC
AGAGTGCCTTCTTCCTCACCTCATATATTTCTTCCGCATGA