
Microexon ID | Vv_18:8101012-8101025:+ |
Species | Vistis vinifera | Coordinates | 18:8101012..8101025 |
Microexon Cluster ID | MEP35 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | Tudor-knot |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGTTGGAGCAAAAA |
Microexon Amino Acid seq | GWSKN |
Microexon-tag DNA Seq | AGAATTGAATTTCAGATGAATGAATGGAAGTATTTTGTTCATTACCTTGGTTGGAGCAAAAACTGGGATGAATGGGTGGGCATGGATCGGCTGCTGAAATTTAGTGAA |
Microexon-tag Amino Acid Seq | RIEFQMNEWKYFVHYLGWSKNWDEWVGMDRLLKFSE |
Microexon-tag spanning region | 8100803-8101730 |
Microexon-tag prediction score | 0.9527 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | VIT_18s0001g09710.t01x |
Reference Transcript ID | VIT_18s0001g09710.t01 |
Gene ID | VIT_18s0001g09710 |
Gene Name | NA |
Transcript ID | VIT_18s0001g09710.t01 |
Protein ID | VIT_18s0001g09710.t01 |
Gene ID | VIT_18s0001g09710 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 3e-09 |
Motif start | 42 |
Motif end | 92 |
Protein seq | >VIT_18s0001g09710.t01 MGSSVDASATETDGDTTETDIDVDADSDTDDYPPLSDSCPFSEGEKVLAYHNLRIYPAKVRRIEFQMNEWKYFVHYLGWS KNWDEWVGMDRLLKFSEENVQKQKALGKKQGIDKNTKPVRASQIKPKNFARGKKWKNDCVTKEAIPVEKLVNIQIPPTLK KQLVDDCEFITHLGQLIRLPRAPTVDKILKKYLDYRIKRDGMISDSAGEILKGLRCYFDKALPVMLLYERERQQYQEAIA NNVSPSTIYGAEHLLRLFVKLPELLFHANIEKETSKELQMELLDFLKFLQKNQSAFFLTSYISSA* |
CDS seq | >VIT_18s0001g09710.t01 ATGGGAAGCTCTGTCGATGCCTCCGCAACCGAAACCGACGGCGACACCACCGAAACCGACATCGACGTCGACGCCGACAG CGACACCGATGACTACCCTCCCCTTTCCGATTCGTGTCCCTTTTCTGAAGGAGAGAAGGTCCTCGCTTATCATAACCTTC GTATTTATCCAGCCAAGGTGCGAAGAATTGAATTTCAGATGAATGAATGGAAGTATTTTGTTCATTACCTTGGTTGGAGC AAAAACTGGGATGAATGGGTGGGCATGGATCGGCTGCTGAAATTTAGTGAAGAGAATGTCCAAAAACAGAAGGCCCTGGG AAAAAAACAGGGCATAGACAAAAACACAAAGCCAGTGCGTGCCTCACAGATTAAGCCAAAAAATTTTGCAAGAGGCAAGA AGTGGAAGAATGACTGTGTCACTAAGGAAGCTATACCAGTGGAGAAGCTTGTGAACATCCAAATTCCTCCAACACTGAAG AAGCAACTAGTTGATGATTGTGAATTCATTACTCATCTGGGCCAGCTTATTAGACTGCCTCGAGCTCCAACTGTTGACAA AATATTGAAGAAGTATCTTGATTACAGGATAAAGAGGGATGGCATGATATCTGATTCGGCTGGAGAAATTCTGAAAGGGT TACGTTGTTACTTTGACAAAGCATTGCCAGTGATGCTTCTGTATGAAAGGGAGCGTCAACAGTATCAAGAAGCAATTGCA AATAATGTCTCTCCTTCAACTATATATGGTGCTGAACATCTATTACGCCTCTTTGTTAAATTGCCCGAGTTATTATTCCA TGCCAACATTGAAAAGGAGACATCAAAAGAGTTACAAATGGAATTACTCGACTTTCTCAAGTTCCTGCAGAAGAATCAGA GTGCCTTCTTCCTCACCTCATATATTTCTTCCGCATGA |
Microexon DNA seq | GGTTGGAGCAAAAA |
Microexon Amino Acid seq | GWSKN |
Microexon-tag DNA Seq | AGAATTGAATTTCAGATGAATGAATGGAAGTATTTTGTTCATTACCTTGGTTGGAGCAAAAACTGGGATGAATGGGTGGGCATGGATCGGCTGCTGAAATTTAGTGAA |
Microexon-tag Amino Acid seq | RIEFQMNEWKYFVHYLGWSKNWDEWVGMDRLLKFSE |
Transcript ID | Vv.15856.1 |
Gene ID | Vv.15856 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 3e-09 |
Motif start | 42 |
Motif end | 92 |
Protein seq | >Vv.15856.1 MGSSVDASATETDGDTTETDIDVDADSDTDDYPPLSDSCPFSEGEKVLAYHNLRIYPAKVRRIEFQMNEWKYFVHYLGWS KNWDEWVGMDRLLKFSEENVQKQKALGKKQGIDKNTKPVRASQIKPKNFARGKKWKNDCVTKKEAIPVEKLVNIQIPPTL KKQLVDDCEFITHLGQLIRLPRAPTVDKILKKYLDYRIKRDGMISDSAGEILKGLRCYFDKALPVMLLYERERQQYQEAI ANNVSPSTIYGAEHLLRLFVKLPELLFHANIEKETSKELQMELLDFLKFLQKNQSAFFLTSYISSA* |
CDS seq | >Vv.15856.1 ATGGGAAGCTCTGTCGATGCCTCCGCAACCGAAACCGACGGCGACACCACCGAAACCGACATCGACGTCGACGCCGACAG CGACACCGATGACTACCCTCCCCTTTCCGATTCGTGTCCCTTTTCTGAAGGAGAGAAGGTCCTCGCTTATCATAACCTTC GTATTTATCCAGCCAAGGTGCGAAGAATTGAATTTCAGATGAATGAATGGAAGTATTTTGTTCATTACCTTGGTTGGAGC AAAAACTGGGATGAATGGGTGGGCATGGATCGGCTGCTGAAATTTAGTGAAGAGAATGTCCAAAAACAGAAGGCCCTGGG AAAAAAACAGGGCATAGACAAAAACACAAAGCCAGTGCGTGCCTCACAGATTAAGCCAAAAAATTTTGCAAGAGGCAAGA AGTGGAAGAATGACTGTGTCACTAAGAAGGAAGCTATACCAGTGGAGAAGCTTGTGAACATCCAAATTCCTCCAACACTG AAGAAGCAACTAGTTGATGATTGTGAATTCATTACTCATCTGGGCCAGCTTATTAGACTGCCTCGAGCTCCAACTGTTGA CAAAATATTGAAGAAGTATCTTGATTACAGGATAAAGAGGGATGGCATGATATCTGATTCGGCTGGAGAAATTCTGAAAG GGTTACGTTGTTACTTTGACAAAGCATTGCCAGTGATGCTTCTGTATGAAAGGGAGCGTCAACAGTATCAAGAAGCAATT GCAAATAATGTCTCTCCTTCAACTATATATGGTGCTGAACATCTATTACGCCTCTTTGTTAAATTGCCCGAGTTATTATT CCATGCCAACATTGAAAAGGAGACATCAAAAGAGTTACAAATGGAATTACTCGACTTTCTCAAGTTCCTGCAGAAGAATC AGAGTGCCTTCTTCCTCACCTCATATATTTCTTCCGCATGA |