
Microexon ID | Ta_2D:15602406-15602419:+ |
Species | Triticum Aestivum | Coordinates | 2D:15602406..15602419 |
Microexon Cluster ID | MEP35 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | Tudor-knot |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGATGGAATAAAAA |
Microexon Amino Acid seq | GWNKN |
Microexon-tag DNA Seq | AAAACTGAAAATCGGGAGGACGAGTGGCGGTATTTCGTCCATTATCTTGGATGGAATAAAAATTGGGATGAATGGGTCGCAAGTGATCGTTTATTGAAGTTGACTGAA |
Microexon-tag Amino Acid Seq | KTENREDEWRYFVHYLGWNKNWDEWVASDRLLKLTE |
Microexon-tag spanning region | 15602170-15604193 |
Microexon-tag prediction score | 0.9421 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2D02G043400.1x |
Reference Transcript ID | TraesCS2D02G043400.1 |
Gene ID | TraesCS2D02G043400 |
Gene Name | NA |
Transcript ID | TraesCS2D02G043400.1 |
Protein ID | |
Gene ID | TraesCS2D02G043400 |
Gene Name | |
Pfam domain motif | MSL3_chromo-like |
Motif E-value | 1.70E-17 |
Motif start | 29 |
Motif end | 95 |
Protein seq | >TraesCS2D02G043400.1 MGGSSNTSGGGGAGGKDKEDKGKGSSVSFTEGEKVLAYHGPLLYEAKVQKTENREDEWRYFVHYLGWNKNWDEWVASDRL LKLTEENVRKQLELKNQSGDKTVRTGGRSAQHNPKGSNVDAKADKEDTKGLVKGKKRKNQLGVEEKERRSSESLLMSQFP VTLKKQLVDDWEFVTQLGKLVKLPRSPTVDGILTKYLEYRVKKDNKISDSCAEVTKGLRCYFDKALPAMLLYKKEQKQYK EEIKGDVSPSTVYGAEHLLRLFVKLPELLSSVNMEEDALNKLQQKLLDILKFLQKNQVHFFLSAYDGDSKGADGAKGK* |
CDS seq | >TraesCS2D02G043400.1 ATGGGGGGCAGCTCCAACACGAGCGGCGGCGGTGGCGCCGGAGGGAAGGACAAGGAGGACAAGGGCAAGGGCTCCTCGGT CTCCTTCACGGAGGGTGAGAAGGTGCTCGCCTACCACGGCCCGCTCCTCTACGAGGCCAAGGTTCAAAAAACTGAAAATC GGGAGGACGAGTGGCGGTATTTCGTCCATTATCTTGGATGGAATAAAAATTGGGATGAATGGGTCGCAAGTGATCGTTTA TTGAAGTTGACTGAAGAGAATGTTCGAAAACAACTAGAGCTGAAAAACCAGTCAGGGGACAAGACCGTCAGGACTGGTGG ACGGTCAGCACAGCATAACCCAAAAGGCTCTAATGTGGATGCAAAAGCCGATAAAGAGGACACCAAGGGTCTTGTCAAGG GGAAGAAGCGCAAGAATCAGCTTGGCGTTGAGGAAAAGGAAAGAAGATCATCAGAGAGTCTCCTAATGTCACAGTTTCCT GTAACACTAAAGAAGCAACTTGTTGATGATTGGGAGTTTGTCACGCAGCTGGGTAAGCTTGTAAAACTACCTCGATCGCC CACTGTTGATGGTATTCTAACGAAGTATTTGGAGTATCGGGTAAAGAAGGATAACAAGATAAGTGACTCTTGTGCTGAGG TAACAAAAGGATTACGCTGTTACTTCGATAAAGCATTGCCTGCCATGCTTTTATACAAGAAAGAGCAAAAGCAGTATAAG GAAGAAATTAAAGGCGACGTTTCACCCTCGACTGTATATGGAGCTGAGCATCTACTACGGCTGTTTGTGAAACTACCAGA GCTACTTTCTTCTGTGAACATGGAAGAAGATGCACTCAACAAACTGCAGCAGAAATTACTGGACATTCTCAAGTTTCTGC AGAAGAACCAAGTCCATTTCTTCCTTTCTGCGTACGACGGCGATTCCAAAGGCGCCGATGGGGCAAAAGGCAAGTAG |
Ta_2D:15602406-15602419:+ does not have available information here.