Microexon ID Ta_2D:15602406-15602419:+
Species Triticum   Aestivum
Coordinates 2D:15602406..15602419
Microexon Cluster ID MEP35
Size 14
Phase 0
Pfam Domain Motif Tudor-knot
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGATGGAATAAAAA
Microexon Amino Acid seq GWNKN
Microexon-tag DNA Seq AAAACTGAAAATCGGGAGGACGAGTGGCGGTATTTCGTCCATTATCTTGGATGGAATAAAAATTGGGATGAATGGGTCGCAAGTGATCGTTTATTGAAGTTGACTGAA
Microexon-tag Amino Acid Seq KTENREDEWRYFVHYLGWNKNWDEWVASDRLLKLTE
Microexon-tag spanning region15602170-15604193
Microexon-tag prediction score0.9421
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS2D02G043400.1x
Reference Transcript ID TraesCS2D02G043400.1
Gene ID TraesCS2D02G043400
Gene Name NA
Transcript ID TraesCS2D02G043400.1
Protein ID
Gene ID TraesCS2D02G043400
Gene Name
Pfam domain motif MSL3_chromo-like
Motif E-value 1.70E-17
Motif start 29
Motif end 95
Protein seq >TraesCS2D02G043400.1
MGGSSNTSGGGGAGGKDKEDKGKGSSVSFTEGEKVLAYHGPLLYEAKVQKTENREDEWRYFVHYLGWNKNWDEWVASDRL
LKLTEENVRKQLELKNQSGDKTVRTGGRSAQHNPKGSNVDAKADKEDTKGLVKGKKRKNQLGVEEKERRSSESLLMSQFP
VTLKKQLVDDWEFVTQLGKLVKLPRSPTVDGILTKYLEYRVKKDNKISDSCAEVTKGLRCYFDKALPAMLLYKKEQKQYK
EEIKGDVSPSTVYGAEHLLRLFVKLPELLSSVNMEEDALNKLQQKLLDILKFLQKNQVHFFLSAYDGDSKGADGAKGK*
CDS seq >TraesCS2D02G043400.1
ATGGGGGGCAGCTCCAACACGAGCGGCGGCGGTGGCGCCGGAGGGAAGGACAAGGAGGACAAGGGCAAGGGCTCCTCGGT
CTCCTTCACGGAGGGTGAGAAGGTGCTCGCCTACCACGGCCCGCTCCTCTACGAGGCCAAGGTTCAAAAAACTGAAAATC
GGGAGGACGAGTGGCGGTATTTCGTCCATTATCTTGGATGGAATAAAAATTGGGATGAATGGGTCGCAAGTGATCGTTTA
TTGAAGTTGACTGAAGAGAATGTTCGAAAACAACTAGAGCTGAAAAACCAGTCAGGGGACAAGACCGTCAGGACTGGTGG
ACGGTCAGCACAGCATAACCCAAAAGGCTCTAATGTGGATGCAAAAGCCGATAAAGAGGACACCAAGGGTCTTGTCAAGG
GGAAGAAGCGCAAGAATCAGCTTGGCGTTGAGGAAAAGGAAAGAAGATCATCAGAGAGTCTCCTAATGTCACAGTTTCCT
GTAACACTAAAGAAGCAACTTGTTGATGATTGGGAGTTTGTCACGCAGCTGGGTAAGCTTGTAAAACTACCTCGATCGCC
CACTGTTGATGGTATTCTAACGAAGTATTTGGAGTATCGGGTAAAGAAGGATAACAAGATAAGTGACTCTTGTGCTGAGG
TAACAAAAGGATTACGCTGTTACTTCGATAAAGCATTGCCTGCCATGCTTTTATACAAGAAAGAGCAAAAGCAGTATAAG
GAAGAAATTAAAGGCGACGTTTCACCCTCGACTGTATATGGAGCTGAGCATCTACTACGGCTGTTTGTGAAACTACCAGA
GCTACTTTCTTCTGTGAACATGGAAGAAGATGCACTCAACAAACTGCAGCAGAAATTACTGGACATTCTCAAGTTTCTGC
AGAAGAACCAAGTCCATTTCTTCCTTTCTGCGTACGACGGCGATTCCAAAGGCGCCGATGGGGCAAAAGGCAAGTAG
Ta_2D:15602406-15602419:+ does not have available information here.