Microexon ID Ta_2B:27722149-27722162:+
Species Triticum   Aestivum
Coordinates 2B:27722149..27722162
Microexon Cluster ID MEP35
Size 14
Phase 0
Pfam Domain Motif Tudor-knot
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGATGGAATAAAAA
Microexon Amino Acid seq GWNKN
Microexon-tag DNA Seq AAAACTGAAAATCGGGAGGACGAGTGGCGGTACTTCGTCCATTATCTTGGATGGAATAAAAATTGGGATGAATGGGTCGCAAGTGATCGTTTATTGAAGTTGACTGAA
Microexon-tag Amino Acid Seq KTENREDEWRYFVHYLGWNKNWDEWVASDRLLKLTE
Microexon-tag spanning region27721911-27723842
Microexon-tag prediction score0.9426
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS2B02G057000.1x
Reference Transcript ID TraesCS2B02G057000.1
Gene ID TraesCS2B02G057000
Gene Name NA
Transcript ID TraesCS2B02G057000.1
Protein ID
Gene ID TraesCS2B02G057000
Gene Name
Pfam domain motif MSL3_chromo-like
Motif E-value 1.80E-17
Motif start 34
Motif end 100
Protein seq >TraesCS2B02G057000.1
MGGSSNTTTTTSGGGGAAGKDKDRDRGRGSAVSFTEGEKVLAYHGPLLYEAKVQKTENREDEWRYFVHYLGWNKNWDEWV
ASDRLLKLTEENVRKQLELKNQSGDKSVRTGGRSAQHNPKGSNADAKADKEDTKGLVKGKKRKNQLGVEVAMIPKHEKER
RSSESLLMSQFPVTLKKQLVDDWEFVTQLGKLVKLPRSPTVDDILTKYLEYRVKKDNKISDSCAEVTKGLRCYFDKALPA
MLLYKKEQKQYKEEIKGDVSPSTVYGAEHLLRLFVKLPELLSSVNMEEDALNKLQQKLLDILKFLQKNQVHFFLSAYDGD
SKGADGAKGK*
CDS seq >TraesCS2B02G057000.1
ATGGGCGGCAGCTCCAACACGACCACGACCACGAGCGGCGGCGGCGGCGCCGCCGGGAAGGACAAGGACAGGGACAGGGG
CAGGGGCTCCGCGGTCTCCTTCACGGAGGGCGAGAAGGTGCTCGCCTACCACGGCCCGCTCCTCTACGAGGCCAAGGTTC
AAAAAACTGAAAATCGGGAGGACGAGTGGCGGTACTTCGTCCATTATCTTGGATGGAATAAAAATTGGGATGAATGGGTC
GCAAGTGATCGTTTATTGAAGTTGACTGAAGAGAATGTTCGCAAACAACTAGAGCTGAAAAACCAGTCAGGGGACAAAAG
CGTCAGGACTGGTGGACGGTCAGCACAGCATAACCCAAAAGGCTCTAATGCGGATGCAAAAGCCGATAAAGAGGACACTA
AGGGTCTTGTCAAGGGGAAGAAGCGCAAGAATCAGCTTGGCGTTGAGGTGGCTATGATTCCCAAACATGAAAAGGAAAGA
AGATCATCAGAGAGTCTCCTAATGTCACAGTTTCCCGTAACACTGAAGAAGCAACTTGTTGATGATTGGGAGTTTGTCAC
GCAGCTGGGTAAGCTTGTAAAACTACCTCGATCGCCCACTGTTGATGATATTCTAACGAAGTATTTGGAGTATCGGGTAA
AGAAGGACAACAAGATAAGTGACTCTTGTGCTGAGGTAACAAAAGGATTACGCTGTTACTTCGATAAAGCATTGCCTGCC
ATGCTTTTATACAAGAAAGAGCAAAAGCAGTATAAGGAAGAAATTAAAGGTGACGTTTCACCCTCGACTGTATATGGAGC
TGAGCATCTACTACGTCTGTTTGTGAAACTACCAGAGCTACTTTCTTCTGTGAACATGGAAGAAGATGCACTCAACAAAC
TGCAGCAGAAATTACTGGACATTCTCAAGTTTCTGCAGAAGAACCAAGTCCATTTCTTCCTTTCTGCGTACGACGGCGAT
TCCAAAGGCGCCGACGGGGCAAAAGGCAAATAG
Ta_2B:27722149-27722162:+ does not have available information here.