
Microexon ID | Ta_2B:27722149-27722162:+ |
Species | Triticum Aestivum | Coordinates | 2B:27722149..27722162 |
Microexon Cluster ID | MEP35 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | Tudor-knot |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGATGGAATAAAAA |
Microexon Amino Acid seq | GWNKN |
Microexon-tag DNA Seq | AAAACTGAAAATCGGGAGGACGAGTGGCGGTACTTCGTCCATTATCTTGGATGGAATAAAAATTGGGATGAATGGGTCGCAAGTGATCGTTTATTGAAGTTGACTGAA |
Microexon-tag Amino Acid Seq | KTENREDEWRYFVHYLGWNKNWDEWVASDRLLKLTE |
Microexon-tag spanning region | 27721911-27723842 |
Microexon-tag prediction score | 0.9426 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2B02G057000.1x |
Reference Transcript ID | TraesCS2B02G057000.1 |
Gene ID | TraesCS2B02G057000 |
Gene Name | NA |
Transcript ID | TraesCS2B02G057000.1 |
Protein ID | |
Gene ID | TraesCS2B02G057000 |
Gene Name | |
Pfam domain motif | MSL3_chromo-like |
Motif E-value | 1.80E-17 |
Motif start | 34 |
Motif end | 100 |
Protein seq | >TraesCS2B02G057000.1 MGGSSNTTTTTSGGGGAAGKDKDRDRGRGSAVSFTEGEKVLAYHGPLLYEAKVQKTENREDEWRYFVHYLGWNKNWDEWV ASDRLLKLTEENVRKQLELKNQSGDKSVRTGGRSAQHNPKGSNADAKADKEDTKGLVKGKKRKNQLGVEVAMIPKHEKER RSSESLLMSQFPVTLKKQLVDDWEFVTQLGKLVKLPRSPTVDDILTKYLEYRVKKDNKISDSCAEVTKGLRCYFDKALPA MLLYKKEQKQYKEEIKGDVSPSTVYGAEHLLRLFVKLPELLSSVNMEEDALNKLQQKLLDILKFLQKNQVHFFLSAYDGD SKGADGAKGK* |
CDS seq | >TraesCS2B02G057000.1 ATGGGCGGCAGCTCCAACACGACCACGACCACGAGCGGCGGCGGCGGCGCCGCCGGGAAGGACAAGGACAGGGACAGGGG CAGGGGCTCCGCGGTCTCCTTCACGGAGGGCGAGAAGGTGCTCGCCTACCACGGCCCGCTCCTCTACGAGGCCAAGGTTC AAAAAACTGAAAATCGGGAGGACGAGTGGCGGTACTTCGTCCATTATCTTGGATGGAATAAAAATTGGGATGAATGGGTC GCAAGTGATCGTTTATTGAAGTTGACTGAAGAGAATGTTCGCAAACAACTAGAGCTGAAAAACCAGTCAGGGGACAAAAG CGTCAGGACTGGTGGACGGTCAGCACAGCATAACCCAAAAGGCTCTAATGCGGATGCAAAAGCCGATAAAGAGGACACTA AGGGTCTTGTCAAGGGGAAGAAGCGCAAGAATCAGCTTGGCGTTGAGGTGGCTATGATTCCCAAACATGAAAAGGAAAGA AGATCATCAGAGAGTCTCCTAATGTCACAGTTTCCCGTAACACTGAAGAAGCAACTTGTTGATGATTGGGAGTTTGTCAC GCAGCTGGGTAAGCTTGTAAAACTACCTCGATCGCCCACTGTTGATGATATTCTAACGAAGTATTTGGAGTATCGGGTAA AGAAGGACAACAAGATAAGTGACTCTTGTGCTGAGGTAACAAAAGGATTACGCTGTTACTTCGATAAAGCATTGCCTGCC ATGCTTTTATACAAGAAAGAGCAAAAGCAGTATAAGGAAGAAATTAAAGGTGACGTTTCACCCTCGACTGTATATGGAGC TGAGCATCTACTACGTCTGTTTGTGAAACTACCAGAGCTACTTTCTTCTGTGAACATGGAAGAAGATGCACTCAACAAAC TGCAGCAGAAATTACTGGACATTCTCAAGTTTCTGCAGAAGAACCAAGTCCATTTCTTCCTTTCTGCGTACGACGGCGAT TCCAAAGGCGCCGACGGGGCAAAAGGCAAATAG |
Ta_2B:27722149-27722162:+ does not have available information here.