Microexon ID Sm_GL377594:1372739-1372752:+
Species Selaginella moellendorffii
Coordinates GL377594:1372739..1372752
Microexon Cluster ID MEP35
Size 14
Phase 0
Pfam Domain Motif Tudor-knot
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGATGGAGTAAGAA
Microexon Amino Acid seq GWSKN
Microexon-tag DNA Seq AAGGCAGAGCTTCGAAAGAACGAATGGAAATACTTCGTGCATTACCTGGGATGGAGTAAGAACTGGGACGAATGGATTGGGGAGGAGCGTCTGCTGCCTCTGAACGAA
Microexon-tag Amino Acid Seq KAELRKNEWKYFVHYLGWSKNWDEWIGEERLLPLNE
Microexon-tag spanning region1372629-1372861
Microexon-tag prediction score0.9264
Overlapped with the annotated transcript (%) 100
New Transcript ID EFJ22850x
Reference Transcript ID EFJ22850
Gene ID SELMODRAFT_228384
Gene Name NA
Transcript ID EFJ22850
Protein ID EFJ22850
Gene ID SELMODRAFT_228384
Gene Name NA
Pfam domain motif Tudor-knot
Motif E-value 1.7e-10
Motif start 25
Motif end 75
Protein seq >EFJ22850
MSAPLDAPAEEDTTGEKEIAMTQFKDGDKVLAYHGPLIYEAKIQKAELRKNEWKYFVHYLGWSKNWDEWIGEERLLPLNE
ENLEKQKHLVNTQAADKRGKGRMGQGKPKGATSTATKGRKRKSEEKDGEDNSLKFSLPAALKKLLIEDCELVTQGSKLAK
LPKSPSVEEILQKYLETKTKPGDSLVEILNGLRSYFDKALPLMLLYKEERKQHVEVFANNTSTPSAVYGAEHFLRLFVKL
PELLQYVNMEEEAASQLQQKLMDLLKFIQKNQSTFFHANADGLKFENK*
CDS seq >EFJ22850
ATGAGCGCTCCATTGGATGCTCCAGCGGAAGAAGATACCACTGGCGAGAAGGAAATCGCAATGACCCAATTCAAGGATGG
GGACAAAGTGCTTGCTTACCACGGGCCTCTCATTTACGAAGCCAAGATTCAAAAGGCAGAGCTTCGAAAGAACGAATGGA
AATACTTCGTGCATTACCTGGGATGGAGTAAGAACTGGGACGAATGGATTGGGGAGGAGCGTCTGCTGCCTCTGAACGAA
GAGAATTTGGAGAAACAAAAGCATCTGGTCAATACGCAAGCTGCGGACAAGCGTGGGAAAGGACGGATGGGTCAGGGAAA
GCCAAAGGGAGCCACAAGCACTGCTACAAAAGGAAGGAAACGCAAGTCTGAGGAAAAAGATGGTGAGGATAACTCACTAA
AGTTTTCACTGCCAGCTGCTTTGAAAAAGCTTCTTATAGAGGACTGCGAGCTTGTTACGCAAGGCAGCAAGCTAGCCAAG
CTACCAAAAAGTCCCTCCGTCGAAGAGATATTGCAAAAATATCTAGAAACTAAGACAAAACCGGGAGACTCTCTGGTTGA
GATACTTAATGGCCTTCGCTCTTATTTCGACAAGGCTCTTCCTCTGATGTTGTTATACAAGGAGGAACGTAAGCAACATG
TAGAAGTCTTTGCTAATAACACATCCACGCCATCCGCTGTGTATGGAGCTGAACACTTTCTCCGTTTGTTTGTGAAACTT
CCGGAGCTCCTTCAATATGTAAATATGGAAGAGGAGGCAGCTTCTCAGCTACAACAAAAGCTGATGGACCTTTTGAAATT
TATTCAGAAAAACCAGAGTACCTTCTTCCATGCCAATGCGGACGGCTTGAAGTTCGAAAACAAATGA
Microexon DNA seq GGATGGAGTAAGAA
Microexon Amino Acid seq GWSKN
Microexon-tag DNA Seq AAGGCAGAGCTTCGAAAGAACGAATGGAAATACTTCGTGCATTACCTGGGATGGAGTAAGAACTGGGACGAATGGATTGGGGAGGAGCGTCTGCTGCCTCTGAACGAA
Microexon-tag Amino Acid seq KAELRKNEWKYFVHYLGWSKNWDEWIGEERLLPLNE
Transcript ID Sm.14984.1
Gene ID Sm.14984
Gene Name NA
Pfam domain motif Tudor-knot
Motif E-value 7.6e-11
Motif start 25
Motif end 75
Protein seq >Sm.14984.1
MSAPLDAPAEEDTTGEKEIAMTQFKDGDKVLAYHGPLIYEAKIQKAELRKNEWKYFVHYLGWSKNWDEWIGEERLLPLNE
ENLEKQKHLVNTQAADKRGKGRMGQGKPKGATSTATKGRKRKSEEKDGEDNSLKFSLPAALKKLLIEDCELVTQGSKLAK
LPKSPSVEEILQKYLETKTKP*
CDS seq >Sm.14984.1
ATGAGCGCTCCATTGGATGCTCCAGCGGAAGAAGATACCACTGGCGAGAAGGAAATCGCAATGACCCAATTCAAGGATGG
GGACAAAGTGCTTGCTTACCACGGGCCTCTCATTTACGAAGCCAAGATTCAAAAGGCAGAGCTTCGAAAGAACGAATGGA
AATACTTCGTGCATTACCTGGGATGGAGTAAGAACTGGGACGAATGGATTGGGGAGGAGCGTCTGCTGCCTCTGAACGAA
GAGAATTTGGAGAAACAAAAGCATCTGGTCAATACGCAAGCTGCGGACAAGCGTGGGAAAGGACGGATGGGTCAGGGAAA
GCCAAAGGGAGCCACAAGCACTGCTACAAAAGGAAGGAAACGCAAGTCTGAGGAAAAAGATGGTGAGGATAACTCACTAA
AGTTTTCACTGCCAGCTGCTTTGAAAAAGCTTCTTATAGAGGACTGCGAGCTTGTTACGCAAGGCAGCAAGCTAGCCAAG
CTACCAAAAAGTCCCTCCGTCGAAGAGATATTGCAAAAATATCTAGAAACTAAGACAAAACCGTAA