
Microexon ID | Sm_GL377594:1372739-1372752:+ |
Species | Selaginella moellendorffii | Coordinates | GL377594:1372739..1372752 |
Microexon Cluster ID | MEP35 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | Tudor-knot |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGATGGAGTAAGAA |
Microexon Amino Acid seq | GWSKN |
Microexon-tag DNA Seq | AAGGCAGAGCTTCGAAAGAACGAATGGAAATACTTCGTGCATTACCTGGGATGGAGTAAGAACTGGGACGAATGGATTGGGGAGGAGCGTCTGCTGCCTCTGAACGAA |
Microexon-tag Amino Acid Seq | KAELRKNEWKYFVHYLGWSKNWDEWIGEERLLPLNE |
Microexon-tag spanning region | 1372629-1372861 |
Microexon-tag prediction score | 0.9264 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EFJ22850x |
Reference Transcript ID | EFJ22850 |
Gene ID | SELMODRAFT_228384 |
Gene Name | NA |
Transcript ID | EFJ22850 |
Protein ID | EFJ22850 |
Gene ID | SELMODRAFT_228384 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 1.7e-10 |
Motif start | 25 |
Motif end | 75 |
Protein seq | >EFJ22850 MSAPLDAPAEEDTTGEKEIAMTQFKDGDKVLAYHGPLIYEAKIQKAELRKNEWKYFVHYLGWSKNWDEWIGEERLLPLNE ENLEKQKHLVNTQAADKRGKGRMGQGKPKGATSTATKGRKRKSEEKDGEDNSLKFSLPAALKKLLIEDCELVTQGSKLAK LPKSPSVEEILQKYLETKTKPGDSLVEILNGLRSYFDKALPLMLLYKEERKQHVEVFANNTSTPSAVYGAEHFLRLFVKL PELLQYVNMEEEAASQLQQKLMDLLKFIQKNQSTFFHANADGLKFENK* |
CDS seq | >EFJ22850 ATGAGCGCTCCATTGGATGCTCCAGCGGAAGAAGATACCACTGGCGAGAAGGAAATCGCAATGACCCAATTCAAGGATGG GGACAAAGTGCTTGCTTACCACGGGCCTCTCATTTACGAAGCCAAGATTCAAAAGGCAGAGCTTCGAAAGAACGAATGGA AATACTTCGTGCATTACCTGGGATGGAGTAAGAACTGGGACGAATGGATTGGGGAGGAGCGTCTGCTGCCTCTGAACGAA GAGAATTTGGAGAAACAAAAGCATCTGGTCAATACGCAAGCTGCGGACAAGCGTGGGAAAGGACGGATGGGTCAGGGAAA GCCAAAGGGAGCCACAAGCACTGCTACAAAAGGAAGGAAACGCAAGTCTGAGGAAAAAGATGGTGAGGATAACTCACTAA AGTTTTCACTGCCAGCTGCTTTGAAAAAGCTTCTTATAGAGGACTGCGAGCTTGTTACGCAAGGCAGCAAGCTAGCCAAG CTACCAAAAAGTCCCTCCGTCGAAGAGATATTGCAAAAATATCTAGAAACTAAGACAAAACCGGGAGACTCTCTGGTTGA GATACTTAATGGCCTTCGCTCTTATTTCGACAAGGCTCTTCCTCTGATGTTGTTATACAAGGAGGAACGTAAGCAACATG TAGAAGTCTTTGCTAATAACACATCCACGCCATCCGCTGTGTATGGAGCTGAACACTTTCTCCGTTTGTTTGTGAAACTT CCGGAGCTCCTTCAATATGTAAATATGGAAGAGGAGGCAGCTTCTCAGCTACAACAAAAGCTGATGGACCTTTTGAAATT TATTCAGAAAAACCAGAGTACCTTCTTCCATGCCAATGCGGACGGCTTGAAGTTCGAAAACAAATGA |
Microexon DNA seq | GGATGGAGTAAGAA |
Microexon Amino Acid seq | GWSKN |
Microexon-tag DNA Seq | AAGGCAGAGCTTCGAAAGAACGAATGGAAATACTTCGTGCATTACCTGGGATGGAGTAAGAACTGGGACGAATGGATTGGGGAGGAGCGTCTGCTGCCTCTGAACGAA |
Microexon-tag Amino Acid seq | KAELRKNEWKYFVHYLGWSKNWDEWIGEERLLPLNE |
Transcript ID | Sm.14984.1 |
Gene ID | Sm.14984 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 7.6e-11 |
Motif start | 25 |
Motif end | 75 |
Protein seq | >Sm.14984.1 MSAPLDAPAEEDTTGEKEIAMTQFKDGDKVLAYHGPLIYEAKIQKAELRKNEWKYFVHYLGWSKNWDEWIGEERLLPLNE ENLEKQKHLVNTQAADKRGKGRMGQGKPKGATSTATKGRKRKSEEKDGEDNSLKFSLPAALKKLLIEDCELVTQGSKLAK LPKSPSVEEILQKYLETKTKP* |
CDS seq | >Sm.14984.1 ATGAGCGCTCCATTGGATGCTCCAGCGGAAGAAGATACCACTGGCGAGAAGGAAATCGCAATGACCCAATTCAAGGATGG GGACAAAGTGCTTGCTTACCACGGGCCTCTCATTTACGAAGCCAAGATTCAAAAGGCAGAGCTTCGAAAGAACGAATGGA AATACTTCGTGCATTACCTGGGATGGAGTAAGAACTGGGACGAATGGATTGGGGAGGAGCGTCTGCTGCCTCTGAACGAA GAGAATTTGGAGAAACAAAAGCATCTGGTCAATACGCAAGCTGCGGACAAGCGTGGGAAAGGACGGATGGGTCAGGGAAA GCCAAAGGGAGCCACAAGCACTGCTACAAAAGGAAGGAAACGCAAGTCTGAGGAAAAAGATGGTGAGGATAACTCACTAA AGTTTTCACTGCCAGCTGCTTTGAAAAAGCTTCTTATAGAGGACTGCGAGCTTGTTACGCAAGGCAGCAAGCTAGCCAAG CTACCAAAAAGTCCCTCCGTCGAAGAGATATTGCAAAAATATCTAGAAACTAAGACAAAACCGTAA |