Microexon ID Sm_GL377575:2147421-2147434:-
Species Selaginella moellendorffii
Coordinates GL377575:2147421..2147434
Microexon Cluster ID MEP35
Size 14
Phase 0
Pfam Domain Motif Tudor-knot
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGATGGAGTAAGAA
Microexon Amino Acid seq GWSKN
Microexon-tag DNA Seq AAGGCAGAGCTTCGAAAGAACGAATGGAAATACTTCGTGCATTACCTGGGATGGAGTAAGAACTGGGACGAATGGATTGGGGAGGAGCGTCTGCTGCCTCTGAACGAA
Microexon-tag Amino Acid Seq KAELRKNEWKYFVHYLGWSKNWDEWIGEERLLPLNE
Microexon-tag spanning region2147312-2147544
Microexon-tag prediction score0.9264
Overlapped with the annotated transcript (%) 100
New Transcript ID EFJ30795x
Reference Transcript ID EFJ30795
Gene ID SELMODRAFT_270711
Gene Name NA
Transcript ID EFJ30795
Protein ID EFJ30795
Gene ID SELMODRAFT_270711
Gene Name NA
Pfam domain motif Tudor-knot
Motif E-value 1.7e-10
Motif start 25
Motif end 75
Protein seq >EFJ30795
MSAPLDAPAEEDTTGEKEIAMTQFKDGDKVLAYHGPLIYEAKIQKAELRKNEWKYFVHYLGWSKNWDEWIGEERLLPLNE
ENLEKQKHLVNTQAADKRGKGRMAQGKPKGATSTATKGRKRKSEEKDGEDNSLKFSLPAALKKLLIEDCELVTQGSKLAK
LPKSPSVEEILQKYLETKTKPGDSLVEILNGLRSYFDKALPLMLLYKEERKQHVEVFANNTSTPSAVYGAEHFLRLFVKL
PELLQYVNMEEEAASQLQQKLMDLLKFIQKNQSTFFHANADGLKFENK*
CDS seq >EFJ30795
ATGAGCGCTCCATTGGATGCTCCAGCGGAAGAAGATACCACTGGCGAGAAGGAAATCGCAATGACCCAATTCAAGGATGG
GGACAAAGTGCTTGCTTACCACGGGCCTCTCATTTACGAAGCCAAGATTCAAAAGGCAGAGCTTCGAAAGAACGAATGGA
AATACTTCGTGCATTACCTGGGATGGAGTAAGAACTGGGACGAATGGATTGGGGAGGAGCGTCTGCTGCCTCTGAACGAA
GAGAATTTGGAGAAACAAAAGCATCTGGTCAATACGCAAGCTGCGGACAAGCGTGGGAAAGGACGGATGGCTCAGGGAAA
GCCAAAGGGAGCCACAAGCACTGCTACAAAAGGAAGGAAACGCAAGTCTGAGGAAAAAGATGGTGAGGATAACTCACTAA
AGTTTTCACTCCCAGCTGCTTTGAAAAAGCTTCTTATAGAGGACTGCGAGCTTGTTACGCAAGGCAGCAAGCTAGCCAAG
CTACCAAAAAGTCCCTCCGTCGAAGAGATATTGCAAAAATATCTAGAAACTAAGACAAAACCGGGAGACTCTCTGGTTGA
GATACTTAATGGCCTTCGCTCTTATTTCGACAAGGCTCTTCCTCTGATGTTGTTATACAAGGAGGAACGTAAGCAACATG
TAGAAGTCTTTGCTAATAACACATCCACGCCATCCGCTGTGTATGGAGCTGAACACTTTCTCCGTTTGTTTGTGAAACTT
CCGGAGCTCCTTCAATATGTAAATATGGAAGAGGAGGCAGCTTCTCAGCTACAACAAAAGCTGATGGACCTTTTGAAATT
TATTCAGAAAAACCAGAGTACCTTCTTCCATGCCAATGCGGACGGCTTGAAGTTCGAAAACAAATGA
Microexon DNA seq GGATGGAGTAAGAA
Microexon Amino Acid seq GWSKN
Microexon-tag DNA Seq AAGGCAGAGCTTCGAAAGAACGAATGGAAATACTTCGTGCATTACCTGGGATGGAGTAAGAACTGGGACGAATGGATTGGGGAGGAGCGTCTGCTGCCTCTGAACGAA
Microexon-tag Amino Acid seq KAELRKNEWKYFVHYLGWSKNWDEWIGEERLLPLNE
Transcript ID Sm.7911.1
Gene ID Sm.7911
Gene Name NA
Pfam domain motif Tudor-knot
Motif E-value 1.7e-10
Motif start 25
Motif end 75
Protein seq >Sm.7911.1
MSAPLDAPAEEDTTGEKEIAMTQFKDGDKVLAYHGPLIYEAKIQKAELRKNEWKYFVHYLGWSKNWDEWIGEERLLPLNE
ENLEKQKHLVNTQAADKRGKGRMAQGKPKGATSTATKGRKRKSEEKDGEDNSLKFSLPAALKKLLIEDCELVTQGSKLAK
LPKSPSVEEILQKYLETKTKPGDSLVEILNGLRSYFDKALPLMLLYKEERKQHVEVFANNTSTPSAVYGAEHFLRLFVKL
PELLQYVNMEEEAASQLQQKLMDLLKFIQKNQSTFFHANADGLKFENK*
CDS seq >Sm.7911.1
ATGAGCGCTCCATTGGATGCTCCAGCGGAAGAAGATACCACTGGCGAGAAGGAAATCGCAATGACCCAATTCAAGGATGG
GGACAAAGTGCTTGCTTACCACGGGCCTCTCATTTACGAAGCCAAGATTCAAAAGGCAGAGCTTCGAAAGAACGAATGGA
AATACTTCGTGCATTACCTGGGATGGAGTAAGAACTGGGACGAATGGATTGGGGAGGAGCGTCTGCTGCCTCTGAACGAA
GAGAATTTGGAGAAACAAAAGCATCTGGTCAATACGCAAGCTGCGGACAAGCGTGGGAAAGGACGGATGGCTCAGGGAAA
GCCAAAGGGAGCCACAAGCACTGCTACAAAAGGAAGGAAACGCAAGTCTGAGGAAAAAGATGGTGAGGATAACTCACTAA
AGTTTTCACTCCCAGCTGCTTTGAAAAAGCTTCTTATAGAGGACTGCGAGCTTGTTACGCAAGGCAGCAAGCTAGCCAAG
CTACCAAAAAGTCCCTCCGTCGAAGAGATATTGCAAAAATATCTAGAAACTAAGACAAAACCGGGAGACTCTCTGGTTGA
GATACTTAATGGCCTTCGCTCTTATTTCGACAAGGCTCTTCCTCTGATGTTGTTATACAAGGAGGAACGTAAGCAACATG
TAGAAGTCTTTGCTAATAACACATCCACGCCATCCGCTGTGTATGGAGCTGAACACTTTCTCCGTTTGTTTGTGAAACTT
CCGGAGCTCCTTCAATATGTAAATATGGAAGAGGAGGCAGCTTCTCAGCTACAACAAAAGCTGATGGACCTTTTGAAATT
TATTCAGAAAAACCAGAGTACCTTCTTCCATGCCAATGCGGACGGCTTGAAGTTCGAAAACAAATGA