
Microexon ID | Sm_GL377575:2147421-2147434:- |
Species | Selaginella moellendorffii | Coordinates | GL377575:2147421..2147434 |
Microexon Cluster ID | MEP35 |
Size | 14 |
Phase | 0 |
Pfam Domain Motif | Tudor-knot |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 48,14,46 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGATGGAGTAAGAA |
Microexon Amino Acid seq | GWSKN |
Microexon-tag DNA Seq | AAGGCAGAGCTTCGAAAGAACGAATGGAAATACTTCGTGCATTACCTGGGATGGAGTAAGAACTGGGACGAATGGATTGGGGAGGAGCGTCTGCTGCCTCTGAACGAA |
Microexon-tag Amino Acid Seq | KAELRKNEWKYFVHYLGWSKNWDEWIGEERLLPLNE |
Microexon-tag spanning region | 2147312-2147544 |
Microexon-tag prediction score | 0.9264 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EFJ30795x |
Reference Transcript ID | EFJ30795 |
Gene ID | SELMODRAFT_270711 |
Gene Name | NA |
Transcript ID | EFJ30795 |
Protein ID | EFJ30795 |
Gene ID | SELMODRAFT_270711 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 1.7e-10 |
Motif start | 25 |
Motif end | 75 |
Protein seq | >EFJ30795 MSAPLDAPAEEDTTGEKEIAMTQFKDGDKVLAYHGPLIYEAKIQKAELRKNEWKYFVHYLGWSKNWDEWIGEERLLPLNE ENLEKQKHLVNTQAADKRGKGRMAQGKPKGATSTATKGRKRKSEEKDGEDNSLKFSLPAALKKLLIEDCELVTQGSKLAK LPKSPSVEEILQKYLETKTKPGDSLVEILNGLRSYFDKALPLMLLYKEERKQHVEVFANNTSTPSAVYGAEHFLRLFVKL PELLQYVNMEEEAASQLQQKLMDLLKFIQKNQSTFFHANADGLKFENK* |
CDS seq | >EFJ30795 ATGAGCGCTCCATTGGATGCTCCAGCGGAAGAAGATACCACTGGCGAGAAGGAAATCGCAATGACCCAATTCAAGGATGG GGACAAAGTGCTTGCTTACCACGGGCCTCTCATTTACGAAGCCAAGATTCAAAAGGCAGAGCTTCGAAAGAACGAATGGA AATACTTCGTGCATTACCTGGGATGGAGTAAGAACTGGGACGAATGGATTGGGGAGGAGCGTCTGCTGCCTCTGAACGAA GAGAATTTGGAGAAACAAAAGCATCTGGTCAATACGCAAGCTGCGGACAAGCGTGGGAAAGGACGGATGGCTCAGGGAAA GCCAAAGGGAGCCACAAGCACTGCTACAAAAGGAAGGAAACGCAAGTCTGAGGAAAAAGATGGTGAGGATAACTCACTAA AGTTTTCACTCCCAGCTGCTTTGAAAAAGCTTCTTATAGAGGACTGCGAGCTTGTTACGCAAGGCAGCAAGCTAGCCAAG CTACCAAAAAGTCCCTCCGTCGAAGAGATATTGCAAAAATATCTAGAAACTAAGACAAAACCGGGAGACTCTCTGGTTGA GATACTTAATGGCCTTCGCTCTTATTTCGACAAGGCTCTTCCTCTGATGTTGTTATACAAGGAGGAACGTAAGCAACATG TAGAAGTCTTTGCTAATAACACATCCACGCCATCCGCTGTGTATGGAGCTGAACACTTTCTCCGTTTGTTTGTGAAACTT CCGGAGCTCCTTCAATATGTAAATATGGAAGAGGAGGCAGCTTCTCAGCTACAACAAAAGCTGATGGACCTTTTGAAATT TATTCAGAAAAACCAGAGTACCTTCTTCCATGCCAATGCGGACGGCTTGAAGTTCGAAAACAAATGA |
Microexon DNA seq | GGATGGAGTAAGAA |
Microexon Amino Acid seq | GWSKN |
Microexon-tag DNA Seq | AAGGCAGAGCTTCGAAAGAACGAATGGAAATACTTCGTGCATTACCTGGGATGGAGTAAGAACTGGGACGAATGGATTGGGGAGGAGCGTCTGCTGCCTCTGAACGAA |
Microexon-tag Amino Acid seq | KAELRKNEWKYFVHYLGWSKNWDEWIGEERLLPLNE |
Transcript ID | Sm.7911.1 |
Gene ID | Sm.7911 |
Gene Name | NA |
Pfam domain motif | Tudor-knot |
Motif E-value | 1.7e-10 |
Motif start | 25 |
Motif end | 75 |
Protein seq | >Sm.7911.1 MSAPLDAPAEEDTTGEKEIAMTQFKDGDKVLAYHGPLIYEAKIQKAELRKNEWKYFVHYLGWSKNWDEWIGEERLLPLNE ENLEKQKHLVNTQAADKRGKGRMAQGKPKGATSTATKGRKRKSEEKDGEDNSLKFSLPAALKKLLIEDCELVTQGSKLAK LPKSPSVEEILQKYLETKTKPGDSLVEILNGLRSYFDKALPLMLLYKEERKQHVEVFANNTSTPSAVYGAEHFLRLFVKL PELLQYVNMEEEAASQLQQKLMDLLKFIQKNQSTFFHANADGLKFENK* |
CDS seq | >Sm.7911.1 ATGAGCGCTCCATTGGATGCTCCAGCGGAAGAAGATACCACTGGCGAGAAGGAAATCGCAATGACCCAATTCAAGGATGG GGACAAAGTGCTTGCTTACCACGGGCCTCTCATTTACGAAGCCAAGATTCAAAAGGCAGAGCTTCGAAAGAACGAATGGA AATACTTCGTGCATTACCTGGGATGGAGTAAGAACTGGGACGAATGGATTGGGGAGGAGCGTCTGCTGCCTCTGAACGAA GAGAATTTGGAGAAACAAAAGCATCTGGTCAATACGCAAGCTGCGGACAAGCGTGGGAAAGGACGGATGGCTCAGGGAAA GCCAAAGGGAGCCACAAGCACTGCTACAAAAGGAAGGAAACGCAAGTCTGAGGAAAAAGATGGTGAGGATAACTCACTAA AGTTTTCACTCCCAGCTGCTTTGAAAAAGCTTCTTATAGAGGACTGCGAGCTTGTTACGCAAGGCAGCAAGCTAGCCAAG CTACCAAAAAGTCCCTCCGTCGAAGAGATATTGCAAAAATATCTAGAAACTAAGACAAAACCGGGAGACTCTCTGGTTGA GATACTTAATGGCCTTCGCTCTTATTTCGACAAGGCTCTTCCTCTGATGTTGTTATACAAGGAGGAACGTAAGCAACATG TAGAAGTCTTTGCTAATAACACATCCACGCCATCCGCTGTGTATGGAGCTGAACACTTTCTCCGTTTGTTTGTGAAACTT CCGGAGCTCCTTCAATATGTAAATATGGAAGAGGAGGCAGCTTCTCAGCTACAACAAAAGCTGATGGACCTTTTGAAATT TATTCAGAAAAACCAGAGTACCTTCTTCCATGCCAATGCGGACGGCTTGAAGTTCGAAAACAAATGA |