Microexon ID Sl_2:54495240-54495253:+
Species Solanum   Lycopersicum
Coordinates 2:54495240..54495253
Microexon Cluster ID MEP35
Size 14
Phase 0
Pfam Domain Motif Tudor-knot
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGCTGGAACAAAAA
Microexon Amino Acid seq GWNKN
Microexon-tag DNA Seq AAAGCAGAGCTGCGGAAGAACGAATGGAGATACTTCGTTCATTACCTTGGCTGGAACAAAAATTGGGATGAATGGGTAGGAGCTGACCGCTTGATGAAGCACACAGAA
Microexon-tag Amino Acid Seq KAELRKNEWRYFVHYLGWNKNWDEWVGADRLMKHTE
Microexon-tag spanning region54495005-54496548
Microexon-tag prediction score0.9839
Overlapped with the annotated transcript (%) 100
New Transcript ID Solyc02g092910.3.1x
Reference Transcript ID Solyc02g092910.3.1
Gene ID Solyc02g092910.3
Gene Name NA
Transcript ID Solyc02g092910.3.1
Protein ID
Gene ID Solyc02g092910.3
Gene Name
Pfam domain motif MSL3_chromo-like
Motif E-value 3.40E-15
Motif start 27
Motif end 93
Protein seq >Solyc02g092910.3.1
MVNSKNNSSTDSENSSGDVPDSKPSLYFEGEKVLAYHGPRIYEAKVQKAELRKNEWRYFVHYLGWNKNWDEWVGADRLMK
HTEDNVLKQQALDKKQGMEKSTKSGRSAPAKPKSSADVKLDKEETKSNVPKGKKRKTDSGAEKGNVSVEKLVKIQIPSTL
KKQLVDDWEFIMHQNKLVKLPRSPTVDDILTKYLEYRSKKDGMMTDSVGEILNGIRCYFDKALPALLLYKKERQQYHEAV
SDNVSPSSVYGAEHLLRLFVKLPELIAYAKIDEESLTKLQQKFLDFLKFLQKNQGTFFLSAYDGPKASEGNGKDKES*
CDS seq >Solyc02g092910.3.1
ATGGTTAACTCAAAAAACAACTCTTCTACCGACAGCGAAAATTCCTCCGGTGACGTTCCCGACTCTAAACCTAGTCTCTA
CTTTGAAGGCGAGAAGGTTCTCGCTTATCATGGCCCTCGCATCTACGAAGCAAAGGTCCAAAAAGCAGAGCTGCGGAAGA
ACGAATGGAGATACTTCGTTCATTACCTTGGCTGGAACAAAAATTGGGATGAATGGGTAGGAGCTGACCGCTTGATGAAG
CACACAGAAGACAACGTCTTGAAGCAGCAGGCCCTGGACAAGAAGCAGGGCATGGAGAAAAGTACTAAATCTGGACGTTC
AGCACCGGCAAAACCCAAAAGCTCAGCTGATGTTAAACTGGACAAGGAAGAAACTAAGAGCAATGTTCCAAAAGGGAAAA
AGCGCAAAACTGACTCAGGCGCTGAGAAGGGCAATGTATCTGTAGAGAAACTTGTGAAGATTCAGATTCCATCTACTTTG
AAGAAGCAACTAGTTGATGATTGGGAGTTCATCATGCACCAGAATAAGCTTGTGAAGCTCCCACGATCTCCTACTGTGGA
TGATATATTGACCAAGTACCTTGAATACCGATCCAAAAAGGACGGGATGATGACTGATTCAGTTGGGGAGATACTGAATG
GAATTCGATGCTATTTTGACAAAGCACTGCCTGCACTTTTATTGTACAAGAAGGAGCGCCAACAGTATCATGAAGCAGTT
TCAGATAATGTCTCTCCATCTAGTGTATATGGTGCTGAACATCTATTGCGCCTTTTTGTAAAATTGCCCGAGTTGATTGC
ATATGCAAAAATTGACGAGGAGTCGTTAACGAAGTTGCAACAGAAATTTCTAGACTTTCTCAAGTTTTTGCAGAAAAACC
AGGGTACTTTCTTCCTATCTGCTTATGATGGTCCTAAAGCCTCTGAAGGAAATGGCAAGGATAAAGAAAGCTGA
Sl_2:54495240-54495253:+ does not have available information here.