Microexon ID Sb_4:16491749-16491762:+
Species Sorghum   Bicolor
Coordinates 4:16491749..16491762
Microexon Cluster ID MEP35
Size 14
Phase 0
Pfam Domain Motif Tudor-knot
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 48,14,46
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq AARGCTGARHTYCRRAAGAAKGARTGGARATAYTTYGTYCATTAYCTTGGTTGGAAYAAAAATTGGGATGAATGGGTWGGYRYKGAYCGYYTGWTGAARYWYACTGAR
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GGTTGGAATAAGAA
Microexon Amino Acid seq GWNKN
Microexon-tag DNA Seq AGGATCGAAAATCATGAAGATGAATGGCGCTACTTTGTCCATTATCTCGGTTGGAATAAGAACTGGGATGAATGGGTTGCAAATGACCGCTTGTTGGCATTAACAGAG
Microexon-tag Amino Acid Seq RIENHEDEWRYFVHYLGWNKNWDEWVANDRLLALTE
Microexon-tag spanning region16491449-16493784
Microexon-tag prediction score0.9048
Overlapped with the annotated transcript (%) 100
New Transcript ID OQU84821x
Reference Transcript ID OQU84821
Gene ID SORBI_3004G129300
Gene Name NA
Transcript ID OQU84821
Protein ID
Gene ID SORBI_3004G129300
Gene Name
Pfam domain motif MSL3_chromo-like
Motif E-value 2.80E-11
Motif start 41
Motif end 84
Protein seq >OQU84821
MVTSSSSSQLPTVDSATSPTPASGSGSNGGHGAVGEVQRIENHEDEWRYFVHYLGWNKNWDEWVANDRLLALTEENMRKQ
QELDKNQVVDKTMKSGRSTQHKPKGSNADAKADKDDTKSLMKGKKRKSQPGTEIQEKEKRSSQSLLVLQFPLTLKKQLVD
DWEFVSQMGKFVKLPRSPTVDDILKKYLEHRTKKDGKINDSYAEILKGIRCYFDKALPAMLLYKKERDQYAEEVKGDVSP
STVYGAEHLLRLFVKLPELLAFVNMEEDALNKLQMKLLDILKFIQKNQSTFFTTVYDDGRKSADGAKTK*
CDS seq >OQU84821
ATGGTGACCTCATCTAGCTCCTCCCAGCTCCCCACCGTGGATTCAGCGACCTCCCCAACTCCAGCGAGCGGATCTGGTAG
CAACGGCGGTCATGGCGCTGTCGGCGAGGTTCAAAGGATCGAAAATCATGAAGATGAATGGCGCTACTTTGTCCATTATC
TCGGTTGGAATAAGAACTGGGATGAATGGGTTGCAAATGACCGCTTGTTGGCATTAACAGAGGAAAACATGCGCAAACAA
CAAGAGCTTGACAAGAACCAGGTAGTTGACAAAACAATGAAGTCTGGACGGTCAACACAGCATAAACCAAAAGGCTCCAA
TGCAGATGCAAAAGCTGATAAAGATGACACTAAGAGTCTCATGAAGGGGAAGAAACGTAAAAGTCAGCCTGGGACTGAGA
TTCAGGAAAAGGAAAAAAGATCATCACAGAGTCTACTAGTGTTGCAGTTTCCTTTGACACTGAAGAAGCAACTTGTGGAT
GATTGGGAGTTTGTCTCGCAGATGGGTAAGTTTGTGAAGCTACCACGATCACCTACTGTTGATGATATTCTAAAGAAGTA
TTTGGAGCACCGGACAAAGAAGGATGGCAAGATAAATGACTCCTATGCTGAGATTCTGAAAGGAATACGCTGCTACTTTG
ATAAAGCATTGCCTGCAATGCTTTTATATAAGAAAGAGCGAGATCAGTATGCTGAAGAAGTTAAAGGTGATGTCTCACCG
TCAACTGTATATGGAGCTGAGCACCTATTGCGCCTTTTTGTGAAATTGCCAGAGTTACTTGCTTTTGTCAATATGGAGGA
AGATGCGCTGAACAAGCTACAGATGAAATTGCTGGACATTCTCAAGTTTATTCAGAAGAATCAGAGCACCTTCTTTACCA
CCGTGTACGATGATGGTCGTAAAAGTGCAGATGGGGCTAAAACCAAATGA
Sb_4:16491749-16491762:+ does not have available information here.